Definition Hyphomonas neptunium ATCC 15444 chromosome, complete genome.
Accession NC_008358
Length 3,705,021

Click here to switch to the map view.

The map label for this gene is 114799047

Identifier: 114799047

GI number: 114799047

Start: 2891462

End: 2892208

Strand: Direct

Name: 114799047

Synonym: HNE_2727

Alternate gene names: NA

Gene position: 2891462-2892208 (Clockwise)

Preceding gene: 114799767

Following gene: 114798461

Centisome position: 78.04

GC content: 65.19

Gene sequence:

>747_bases
ATGCTGCTGCACGTTATCCTTGCCTCTCTGTCGATGGCGACAGGCACCGGGCCAATGGATGCCGCGCTGGAGGCAACCGA
AGCGCCCGACACGCTGCGCGCCGCGTTCACCGTGGAGCTGCGCTCGCAAACCGCCCGGCACGTCTATTCCTTCGATCCGC
GAGACCCCAAAGGCGCCCGCTGGAAACTGCTCATGCGGGAAGGCCATGACGAGGAACTCGACGCAGTGGCCGCCAACTGG
GCGAGCGAACCTGCCCCAGATGGCCGCCTCTTCCCGGATGATCTGCGCGCCTGCCTCGGCCAGACCGTTCAGGTGAACAC
CGAAGGCCATGCCTGGCGCGTCGGCTTCCGCCACCATCCCAATTACAATGACAACGAGTTCGACCGCTGGGCGGCCGAGC
GCCTGCAAGCCAATGCCCTGCTCGATCCGGTCGGCGAGCGCTTCCTGCAGATCGACTATACGCTGCCCAAGGCCGTGAAC
GTGCCCAATGGCGGCAAGCTGACCCGCTATAACCAGACCTATATCCTGAGCACCGAGCCGCGCTGGGGCTTCTCCTACGT
GTCCGGCTTTGCCATCGACCTGGAAGCCCGCGCGGCCTTCAAGCGCATCACCCGCAGCTATCAGGCCGAAGTGACCGACG
TGCAGTTCTTCTTCGCCAGCCCGGAAGCCGAACGCGCCTTCCTCGACCGTCAGGCCCAGATCACCGAAGTGAGCCTGCCC
ACTGGATTTGGCGCGCCCCTCCGCTAG

Upstream 100 bases:

>100_bases
GACGCTGAGATTGCCTGAAAATGCGCGGCCGGGACTGGCCGCCGCGAAGTTGCCGCAATCTGTCCAGATGAGTTGCCACC
GGTAGTGACGGGACGAGTAA

Downstream 100 bases:

>100_bases
GTTGGGTTCATGACGATTCACATGGTGAAACTCTGCGTCGGCGCTGACGACATCGACGACCTGGCCGACTGGCAGGCGCG
CCTGATGAAGAAGCTGCCTG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 248; Mature: 248

Protein sequence:

>248_residues
MLLHVILASLSMATGTGPMDAALEATEAPDTLRAAFTVELRSQTARHVYSFDPRDPKGARWKLLMREGHDEELDAVAANW
ASEPAPDGRLFPDDLRACLGQTVQVNTEGHAWRVGFRHHPNYNDNEFDRWAAERLQANALLDPVGERFLQIDYTLPKAVN
VPNGGKLTRYNQTYILSTEPRWGFSYVSGFAIDLEARAAFKRITRSYQAEVTDVQFFFASPEAERAFLDRQAQITEVSLP
TGFGAPLR

Sequences:

>Translated_248_residues
MLLHVILASLSMATGTGPMDAALEATEAPDTLRAAFTVELRSQTARHVYSFDPRDPKGARWKLLMREGHDEELDAVAANW
ASEPAPDGRLFPDDLRACLGQTVQVNTEGHAWRVGFRHHPNYNDNEFDRWAAERLQANALLDPVGERFLQIDYTLPKAVN
VPNGGKLTRYNQTYILSTEPRWGFSYVSGFAIDLEARAAFKRITRSYQAEVTDVQFFFASPEAERAFLDRQAQITEVSLP
TGFGAPLR
>Mature_248_residues
MLLHVILASLSMATGTGPMDAALEATEAPDTLRAAFTVELRSQTARHVYSFDPRDPKGARWKLLMREGHDEELDAVAANW
ASEPAPDGRLFPDDLRACLGQTVQVNTEGHAWRVGFRHHPNYNDNEFDRWAAERLQANALLDPVGERFLQIDYTLPKAVN
VPNGGKLTRYNQTYILSTEPRWGFSYVSGFAIDLEARAAFKRITRSYQAEVTDVQFFFASPEAERAFLDRQAQITEVSLP
TGFGAPLR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 27813; Mature: 27813

Theoretical pI: Translated: 5.37; Mature: 5.37

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLLHVILASLSMATGTGPMDAALEATEAPDTLRAAFTVELRSQTARHVYSFDPRDPKGAR
CHHHHHHHHHHHHCCCCCCHHHHCCCCCCCCEEEEEEEEEHHHHHHHEEECCCCCCCCCE
WKLLMREGHDEELDAVAANWASEPAPDGRLFPDDLRACLGQTVQVNTEGHAWRVGFRHHP
EEEEEECCCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHCCCEEEEECCCCEEEEEEEECC
NYNDNEFDRWAAERLQANALLDPVGERFLQIDYTLPKAVNVPNGGKLTRYNQTYILSTEP
CCCCCHHHHHHHHHHHHHHHHCHHCHHEEEEEEECCCEECCCCCCEEEEECCEEEEECCC
RWGFSYVSGFAIDLEARAAFKRITRSYQAEVTDVQFFFASPEAERAFLDRQAQITEVSLP
CCCHHHHCCEEEEHHHHHHHHHHHHHHHCCEEEEEEEEECCCHHHHHHCCCCEEEEEECC
TGFGAPLR
CCCCCCCC
>Mature Secondary Structure
MLLHVILASLSMATGTGPMDAALEATEAPDTLRAAFTVELRSQTARHVYSFDPRDPKGAR
CHHHHHHHHHHHHCCCCCCHHHHCCCCCCCCEEEEEEEEEHHHHHHHEEECCCCCCCCCE
WKLLMREGHDEELDAVAANWASEPAPDGRLFPDDLRACLGQTVQVNTEGHAWRVGFRHHP
EEEEEECCCCHHHHHHHHHCCCCCCCCCCCCHHHHHHHCCCEEEEECCCCEEEEEEEECC
NYNDNEFDRWAAERLQANALLDPVGERFLQIDYTLPKAVNVPNGGKLTRYNQTYILSTEP
CCCCCHHHHHHHHHHHHHHHHCHHCHHEEEEEEECCCEECCCCCCEEEEECCEEEEECCC
RWGFSYVSGFAIDLEARAAFKRITRSYQAEVTDVQFFFASPEAERAFLDRQAQITEVSLP
CCCHHHHCCEEEEHHHHHHHHHHHHHHHCCEEEEEEEEECCCHHHHHHCCCCEEEEEECC
TGFGAPLR
CCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA