| Definition | Hyphomonas neptunium ATCC 15444 chromosome, complete genome. |
|---|---|
| Accession | NC_008358 |
| Length | 3,705,021 |
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The map label for this gene is iaaA [H]
Identifier: 114799029
GI number: 114799029
Start: 1719404
End: 1720306
Strand: Reverse
Name: iaaA [H]
Synonym: HNE_1675
Alternate gene names: 114799029
Gene position: 1720306-1719404 (Counterclockwise)
Preceding gene: 114798244
Following gene: 114799811
Centisome position: 46.43
GC content: 65.56
Gene sequence:
>903_bases GTGATCCATGGCGGGGCCGGCGTGATCCTGCCTGGCTCCATGACGCCTGAAATGGAGGCGGCCTATATTGCCGCGCTGAA CGTCTCGCTTGAGGCGGGCGCCGCCGTGCTGCGCGAAGGCGGCAGCGCGCTTGACGCCGTTGAAGCCGCCGTGCTGACGA TGGAAGACGACGCGCTGTTCAATGCCGGGCTAGGCGCCGTCTTCACGGCTGAAGGCACGCACGAACTTGACGCCTCCATC ATGGATGGACGCGACCGGAATGCGGGCGCCGTGGCCGGCGTGATGCGCGTGAAAAATCCGATCAAAGCGGCCCGCGCCGT CATGGAAAAATCCGAACACGTCATGTTTGCGGCCGAAGGCGCCGATGCGTTTGCGCAGGACCAGGGCCTCGAGATGGTGG ACAACACATATTTCGATACCGACCGCCGCCGCGAAGCGCTGGACCGTGTCCTGCGCGAGCGGGCCCGCACCGCCGCAGAT CGTCACGGTACGGTGGGCGCCGTCGCCATGGACCTTGAAGGCAACCTCGCCGCCGCCACCACCACGGGCGGCATGACCGC CAAAGCCGCAGGCCGCGTGGGCGACGCGCCTTTGATTGGCGCAGCCACCTATGCCGAAAACGGCGTGTGCGCGGTCTCCG CCACCGGGCATGGCGAATATTTCATCCGCGTCGGCGTTGCCAAAACGATCTGCGACCGCGTGAAACTTGGCGGGGAAGAC GTGAAGACCGCCGCTGGCGTTGCGCTGGGTGAAGTGGCCGCGCTGGGCGGAGATGGCGGCGTCATCGTGATCGGCGGAAC GGGCGATTATGGCTTCGTGTTCAACTCCGCCGGCATGTATCGCGGCTGGATCGATGCGTCAGGGTCGGGCACAGCTATCT ATGGCCAAGACGATGCCGATTAA
Upstream 100 bases:
>100_bases TGTTGCCCTCGCCCTCAGTGGACTGATCGTGAGCGCCTGCGCCAGTGCCTCTTCTGAGCCAATAGCCGCCCCTGCCTCTG CGACGCCCGAGTGGCGCCTC
Downstream 100 bases:
>100_bases TCTGACGTCCCTCAAGGTGCGCGATGCCGGGCCGGGAGACCTTGCCGCGCTCACCGCCCTCTCGCAGAAAACGTTCACGG ACAAGTTCGGGCAGCTTTAC
Product: putative asparaginase
Products: NA
Alternate protein names: Beta-aspartyl-peptidase; EcAIII; Isoaspartyl dipeptidase [H]
Number of amino acids: Translated: 300; Mature: 300
Protein sequence:
>300_residues MIHGGAGVILPGSMTPEMEAAYIAALNVSLEAGAAVLREGGSALDAVEAAVLTMEDDALFNAGLGAVFTAEGTHELDASI MDGRDRNAGAVAGVMRVKNPIKAARAVMEKSEHVMFAAEGADAFAQDQGLEMVDNTYFDTDRRREALDRVLRERARTAAD RHGTVGAVAMDLEGNLAAATTTGGMTAKAAGRVGDAPLIGAATYAENGVCAVSATGHGEYFIRVGVAKTICDRVKLGGED VKTAAGVALGEVAALGGDGGVIVIGGTGDYGFVFNSAGMYRGWIDASGSGTAIYGQDDAD
Sequences:
>Translated_300_residues MIHGGAGVILPGSMTPEMEAAYIAALNVSLEAGAAVLREGGSALDAVEAAVLTMEDDALFNAGLGAVFTAEGTHELDASI MDGRDRNAGAVAGVMRVKNPIKAARAVMEKSEHVMFAAEGADAFAQDQGLEMVDNTYFDTDRRREALDRVLRERARTAAD RHGTVGAVAMDLEGNLAAATTTGGMTAKAAGRVGDAPLIGAATYAENGVCAVSATGHGEYFIRVGVAKTICDRVKLGGED VKTAAGVALGEVAALGGDGGVIVIGGTGDYGFVFNSAGMYRGWIDASGSGTAIYGQDDAD >Mature_300_residues MIHGGAGVILPGSMTPEMEAAYIAALNVSLEAGAAVLREGGSALDAVEAAVLTMEDDALFNAGLGAVFTAEGTHELDASI MDGRDRNAGAVAGVMRVKNPIKAARAVMEKSEHVMFAAEGADAFAQDQGLEMVDNTYFDTDRRREALDRVLRERARTAAD RHGTVGAVAMDLEGNLAAATTTGGMTAKAAGRVGDAPLIGAATYAENGVCAVSATGHGEYFIRVGVAKTICDRVKLGGED VKTAAGVALGEVAALGGDGGVIVIGGTGDYGFVFNSAGMYRGWIDASGSGTAIYGQDDAD
Specific function: May be involved in glutathione, and possibly other peptide, transport, although these results could also be due to polar effects of disruption [H]
COG id: COG1446
COG function: function code E; Asparaginase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the Ntn-hydrolase family [H]
Homologues:
Organism=Homo sapiens, GI145275202, Length=272, Percent_Identity=43.75, Blast_Score=199, Evalue=2e-51, Organism=Homo sapiens, GI145275200, Length=272, Percent_Identity=43.75, Blast_Score=199, Evalue=2e-51, Organism=Homo sapiens, GI98991769, Length=265, Percent_Identity=30.9433962264151, Blast_Score=106, Evalue=3e-23, Organism=Homo sapiens, GI285002251, Length=284, Percent_Identity=29.5774647887324, Blast_Score=91, Evalue=1e-18, Organism=Homo sapiens, GI285002253, Length=284, Percent_Identity=27.8169014084507, Blast_Score=74, Evalue=2e-13, Organism=Escherichia coli, GI1787050, Length=292, Percent_Identity=49.3150684931507, Blast_Score=245, Evalue=3e-66, Organism=Caenorhabditis elegans, GI32564649, Length=209, Percent_Identity=24.4019138755981, Blast_Score=70, Evalue=2e-12, Organism=Drosophila melanogaster, GI18921183, Length=319, Percent_Identity=38.5579937304075, Blast_Score=166, Evalue=1e-41, Organism=Drosophila melanogaster, GI21357893, Length=266, Percent_Identity=31.5789473684211, Blast_Score=116, Evalue=2e-26, Organism=Drosophila melanogaster, GI221330102, Length=237, Percent_Identity=32.0675105485232, Blast_Score=100, Evalue=2e-21, Organism=Drosophila melanogaster, GI24652135, Length=237, Percent_Identity=32.0675105485232, Blast_Score=99, Evalue=3e-21,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000246 [H]
Pfam domain/function: PF01112 Asparaginase_2 [H]
EC number: =3.4.19.5 [H]
Molecular weight: Translated: 30494; Mature: 30494
Theoretical pI: Translated: 4.35; Mature: 4.35
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 4.0 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIHGGAGVILPGSMTPEMEAAYIAALNVSLEAGAAVLREGGSALDAVEAAVLTMEDDALF CEECCCCEEECCCCCCCCCEEEEEEEEEEHHHHHHHHHCCCCHHHHHHEEEEEECCCHHC NAGLGAVFTAEGTHELDASIMDGRDRNAGAVAGVMRVKNPIKAARAVMEKSEHVMFAAEG CCCCCEEEECCCCCCCCCHHCCCCCCCCHHHHHHHHHCCHHHHHHHHHHCCCEEEEEECC ADAFAQDQGLEMVDNTYFDTDRRREALDRVLRERARTAADRHGTVGAVAMDLEGNLAAAT CCHHHHCCCCHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCEEEEE TTGGMTAKAAGRVGDAPLIGAATYAENGVCAVSATGHGEYFIRVGVAKTICDRVKLGGED ECCCCEECCCCCCCCCCEEEEEEECCCCEEEEEECCCCEEEEEECHHHHHHHHHHCCCCH VKTAAGVALGEVAALGGDGGVIVIGGTGDYGFVFNSAGMYRGWIDASGSGTAIYGQDDAD HHHHHCHHHHHHEEECCCCCEEEEECCCCCCEEECCCCCEEEEEECCCCCCEEECCCCCC >Mature Secondary Structure MIHGGAGVILPGSMTPEMEAAYIAALNVSLEAGAAVLREGGSALDAVEAAVLTMEDDALF CEECCCCEEECCCCCCCCCEEEEEEEEEEHHHHHHHHHCCCCHHHHHHEEEEEECCCHHC NAGLGAVFTAEGTHELDASIMDGRDRNAGAVAGVMRVKNPIKAARAVMEKSEHVMFAAEG CCCCCEEEECCCCCCCCCHHCCCCCCCCHHHHHHHHHCCHHHHHHHHHHCCCEEEEEECC ADAFAQDQGLEMVDNTYFDTDRRREALDRVLRERARTAADRHGTVGAVAMDLEGNLAAAT CCHHHHCCCCHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCEEEEE TTGGMTAKAAGRVGDAPLIGAATYAENGVCAVSATGHGEYFIRVGVAKTICDRVKLGGED ECCCCEECCCCCCCCCCEEEEEEECCCCEEEEEECCCCEEEEEECHHHHHHHHHHCCCCH VKTAAGVALGEVAALGGDGGVIVIGGTGDYGFVFNSAGMYRGWIDASGSGTAIYGQDDAD HHHHHCHHHHHHEEECCCCCEEEEECCCCCCEEECCCCCEEEEEECCCCCCEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8905232; 9278503; 3045084; 7984428 [H]