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The map label for this gene is glxA [H]

Identifier: 114798987

GI number: 114798987

Start: 2023049

End: 2024017

Strand: Direct

Name: glxA [H]

Synonym: HNE_1953

Alternate gene names: 114798987

Gene position: 2023049-2024017 (Clockwise)

Preceding gene: 114798740

Following gene: 114797961

Centisome position: 54.6

GC content: 61.92

Gene sequence:

>969_bases
ATGTTTTCCGCCAAACACGCGCCCTTGGAGATTGGTGTCCTCATCTTTGACGGATTCCAGCTACTTGATGCCGCCGGGCC
CATCAGCGTTTTTGAAATGCCCGCCCGCGGGATCACCCCTTCGCCCTATCGGCTTACGCTCTACTCCTTTCAGGGCGGTC
CGGTCAGGGCCTCCTCCGGCGTTCAGATGCACTCAGAAAAGCTACCCCCTGGCCTGGCCCTCGACACGCTGATCGTTTCA
GGCGGTGAAGGCACACGGGAAGCCATGAGCGACGAGGCCCTCCTCAACGCCATACGCGCGCTCTCCGAACGCACGCGGCG
AACCTGCTCTGTCTGCTCGGGGGCCTTCCTGCTTGCTGCCGCCGGCCTGCTGGAGGGACGCCGCGCGACAACCCACTGGC
GGCGCTCCGAAGGGTTCGCAAGGCTCTATCCGGGCATCCATCTGGATGCGGACAGAATATTCGTGCGCGATGGCAAATTC
TGGACGTCGGCCGGCATCACGGCGGGCATCGACCTGGCATTGGCCCTGGTGGAAGACGACCTTGGCGATGACGTAGCCCT
GCGCGCCGCGCGGGAACTTGTTGTCCATCAGCGCCGCCATGGCGGTCAGTCGCAATTCTCGGTCATGCAGGACGTCAAGC
TCGCCTCAGGGCGGTTTGACGAGATGATCGGCTGGATCCGGATGAACCTCCCCGCAGACATCCGTGTGGAAACCATGGCG
GAACAGGCCGGCATGAGCCCGCGAAACTTTGCCCGGGTGTTCAGAACCGAAACCGGAACGACCCCCGCCCGCTTCGTTGA
AAAACTGCGGCTGGAAGCGGCGCGCCAAAGCGTTGAAACGACGAGGCTGCCCCTCCAGAAAATCGCAACGGATACCGGGT
TCTGCGATCCTGAAAGGATGCGTGTTGCCTTCGTAAAGGCTTATGGGCAGCCTCCGATGGTTCTAAGGCGTCAGAGCAAA
AGGATTTGA

Upstream 100 bases:

>100_bases
TCGCGAAAACGGTGGTGAAGGGTTTCTGGCTCATGGCGGCCTCCTTGCTGACAAGGCTTTTGTCGCTTAAAAGCCGACTG
GCAGAAAGGACATTGTTCCC

Downstream 100 bases:

>100_bases
GAAATCCCAGAATTATCGAAAAACAACGATTGACATATCGTATTTCGATAATTCATATGGACTTCAACAAGCTCCCAGCC
CCCAGGAGGCCAAAATGTTG

Product: putative transcriptional regulator DarR

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 322; Mature: 322

Protein sequence:

>322_residues
MFSAKHAPLEIGVLIFDGFQLLDAAGPISVFEMPARGITPSPYRLTLYSFQGGPVRASSGVQMHSEKLPPGLALDTLIVS
GGEGTREAMSDEALLNAIRALSERTRRTCSVCSGAFLLAAAGLLEGRRATTHWRRSEGFARLYPGIHLDADRIFVRDGKF
WTSAGITAGIDLALALVEDDLGDDVALRAARELVVHQRRHGGQSQFSVMQDVKLASGRFDEMIGWIRMNLPADIRVETMA
EQAGMSPRNFARVFRTETGTTPARFVEKLRLEAARQSVETTRLPLQKIATDTGFCDPERMRVAFVKAYGQPPMVLRRQSK
RI

Sequences:

>Translated_322_residues
MFSAKHAPLEIGVLIFDGFQLLDAAGPISVFEMPARGITPSPYRLTLYSFQGGPVRASSGVQMHSEKLPPGLALDTLIVS
GGEGTREAMSDEALLNAIRALSERTRRTCSVCSGAFLLAAAGLLEGRRATTHWRRSEGFARLYPGIHLDADRIFVRDGKF
WTSAGITAGIDLALALVEDDLGDDVALRAARELVVHQRRHGGQSQFSVMQDVKLASGRFDEMIGWIRMNLPADIRVETMA
EQAGMSPRNFARVFRTETGTTPARFVEKLRLEAARQSVETTRLPLQKIATDTGFCDPERMRVAFVKAYGQPPMVLRRQSK
RI
>Mature_322_residues
MFSAKHAPLEIGVLIFDGFQLLDAAGPISVFEMPARGITPSPYRLTLYSFQGGPVRASSGVQMHSEKLPPGLALDTLIVS
GGEGTREAMSDEALLNAIRALSERTRRTCSVCSGAFLLAAAGLLEGRRATTHWRRSEGFARLYPGIHLDADRIFVRDGKF
WTSAGITAGIDLALALVEDDLGDDVALRAARELVVHQRRHGGQSQFSVMQDVKLASGRFDEMIGWIRMNLPADIRVETMA
EQAGMSPRNFARVFRTETGTTPARFVEKLRLEAARQSVETTRLPLQKIATDTGFCDPERMRVAFVKAYGQPPMVLRRQSK
RI

Specific function: Positive Activator Of Genes Required For L-Rhamnose Utilization, Probably Of The Rhamnose Transporter Gene (Rhat). [C]

COG id: COG4977

COG function: function code K; Transcriptional regulator containing an amidase domain and an AraC-type DNA-binding HTH domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH araC/xylS-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009057
- InterPro:   IPR012287
- InterPro:   IPR018062
- InterPro:   IPR020449
- InterPro:   IPR018060
- InterPro:   IPR002818 [H]

Pfam domain/function: PF01965 DJ-1_PfpI; PF00165 HTH_AraC [H]

EC number: NA

Molecular weight: Translated: 35459; Mature: 35459

Theoretical pI: Translated: 9.82; Mature: 9.82

Prosite motif: PS01124 HTH_ARAC_FAMILY_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFSAKHAPLEIGVLIFDGFQLLDAAGPISVFEMPARGITPSPYRLTLYSFQGGPVRASSG
CCCCCCCCEEEEEEEECCHHHHHCCCCCCEEECCCCCCCCCCEEEEEEEECCCCEECCCC
VQMHSEKLPPGLALDTLIVSGGEGTREAMSDEALLNAIRALSERTRRTCSVCSGAFLLAA
CEEHHHCCCCCCEEEHEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AGLLEGRRATTHWRRSEGFARLYPGIHLDADRIFVRDGKFWTSAGITAGIDLALALVEDD
HHHHCCCCHHHHHHHHCCCEECCCCEEECCCEEEEECCCEEECCCCHHHHHHHHEEHHCC
LGDDVALRAARELVVHQRRHGGQSQFSVMQDVKLASGRFDEMIGWIRMNLPADIRVETMA
CCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCHHHHHHHHEECCCCCCCHHHHH
EQAGMSPRNFARVFRTETGTTPARFVEKLRLEAARQSVETTRLPLQKIATDTGFCDPERM
HHHCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCCCHHHH
RVAFVKAYGQPPMVLRRQSKRI
HEEEEECCCCCHHHHHHHHCCC
>Mature Secondary Structure
MFSAKHAPLEIGVLIFDGFQLLDAAGPISVFEMPARGITPSPYRLTLYSFQGGPVRASSG
CCCCCCCCEEEEEEEECCHHHHHCCCCCCEEECCCCCCCCCCEEEEEEEECCCCEECCCC
VQMHSEKLPPGLALDTLIVSGGEGTREAMSDEALLNAIRALSERTRRTCSVCSGAFLLAA
CEEHHHCCCCCCEEEHEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AGLLEGRRATTHWRRSEGFARLYPGIHLDADRIFVRDGKFWTSAGITAGIDLALALVEDD
HHHHCCCCHHHHHHHHCCCEECCCCEEECCCEEEEECCCEEECCCCHHHHHHHHEEHHCC
LGDDVALRAARELVVHQRRHGGQSQFSVMQDVKLASGRFDEMIGWIRMNLPADIRVETMA
CCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHCCCHHHHHHHHEECCCCCCCHHHHH
EQAGMSPRNFARVFRTETGTTPARFVEKLRLEAARQSVETTRLPLQKIATDTGFCDPERM
HHHCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCCCHHHH
RVAFVKAYGQPPMVLRRQSKRI
HEEEEECCCCCHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11481430 [H]