| Definition | Hyphomonas neptunium ATCC 15444 chromosome, complete genome. |
|---|---|
| Accession | NC_008358 |
| Length | 3,705,021 |
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The map label for this gene is 114798984
Identifier: 114798984
GI number: 114798984
Start: 1446332
End: 1447105
Strand: Direct
Name: 114798984
Synonym: HNE_1417
Alternate gene names: NA
Gene position: 1446332-1447105 (Clockwise)
Preceding gene: 114799730
Following gene: 114799968
Centisome position: 39.04
GC content: 67.57
Gene sequence:
>774_bases ATGCGGTTGCGGCATCTGTTTGCAGGGACGCTCCTCTGGGCCGCCTGCGCGGCTTGGCCGGCGCAGGCGGAGCCTGTCGC CGAAGACGTTCCGCTGAAAGACTGGGCCGTCGGCATCCTCGCGGCAGACTGGCGCGACAGCGAAGGCGCCCCCATTGAGG CCTTCGAGAACGCCCGGCGGGATCTCGCTCGCGCCTTTGCCGATGTCGGCTTTGATGCGGACAACATCACCCAGCTGTCG CTGCGGCCGGAACAGCCCGGCGGCGCCGCCCTGCGCTCGGACGAGGTCTTCACCGCTTTCGAGCAGCAGGCACAGTCGGC GCAGGCCGGATGCCTCCTTTACTTCACCTCGCACGGCGTACCCGAAGGCATGGTGCTGGGCGGCGAAGGCCTGCTCAGCC CGGCGCAGCTCAACGGTCTCGTTGGCCAATGGTGTGGCGAGCGGCCAACGGTCGTGGTCGTCTCGGCGTGCTATTCGGGC GTCTTCGTGCCTGTGCTTGCTGCGCCAAACCGTCTCGTGATGACCGCCGCGCGGTCAGACCGCTCCTCCTTCGGCTGCGG CGCGGGCGCGATCTATCCGGTCTTTGACAATTGCGTGCTCGACTCGCTCACCAGCGCCGATGACTTCGTGCATCTCGCCC GGCTCACGCGCCAGTGCGTTACCCTGCGCGAGCGGGAACAACGCCTCTGGCCGCCCTCAGAGCCCCAGGCGCAGATCGGC ACGGATGTCGACGATCTGTTCGTTTTCCTGAACTTTGAGCGCCCGGCGCCCTGA
Upstream 100 bases:
>100_bases CTACCCGGACTAGCAGCCGGCACCCGGCAACTCGCCGCTTGCGCCGGCGCGGCGCCGCTGTTCATATGAATGCGGGAAAC GACGGCTTAGGAGAACACGG
Downstream 100 bases:
>100_bases ACTCAGCCTGCGGACAATGCCGCAAAGCCTGCCTCAAGGTCGGCTTTCAGATCGCTCACCGCTTCCAGCCCTACATGCAC GCGCATCAGCTGGCCGGGCT
Product: putative lipoprotein
Products: NA
Alternate protein names: C13 Family Peptidase; MorN Domain-Containing Protein; Asparaginyl Peptidase; Lipoprotein
Number of amino acids: Translated: 257; Mature: 257
Protein sequence:
>257_residues MRLRHLFAGTLLWAACAAWPAQAEPVAEDVPLKDWAVGILAADWRDSEGAPIEAFENARRDLARAFADVGFDADNITQLS LRPEQPGGAALRSDEVFTAFEQQAQSAQAGCLLYFTSHGVPEGMVLGGEGLLSPAQLNGLVGQWCGERPTVVVVSACYSG VFVPVLAAPNRLVMTAARSDRSSFGCGAGAIYPVFDNCVLDSLTSADDFVHLARLTRQCVTLREREQRLWPPSEPQAQIG TDVDDLFVFLNFERPAP
Sequences:
>Translated_257_residues MRLRHLFAGTLLWAACAAWPAQAEPVAEDVPLKDWAVGILAADWRDSEGAPIEAFENARRDLARAFADVGFDADNITQLS LRPEQPGGAALRSDEVFTAFEQQAQSAQAGCLLYFTSHGVPEGMVLGGEGLLSPAQLNGLVGQWCGERPTVVVVSACYSG VFVPVLAAPNRLVMTAARSDRSSFGCGAGAIYPVFDNCVLDSLTSADDFVHLARLTRQCVTLREREQRLWPPSEPQAQIG TDVDDLFVFLNFERPAP >Mature_257_residues MRLRHLFAGTLLWAACAAWPAQAEPVAEDVPLKDWAVGILAADWRDSEGAPIEAFENARRDLARAFADVGFDADNITQLS LRPEQPGGAALRSDEVFTAFEQQAQSAQAGCLLYFTSHGVPEGMVLGGEGLLSPAQLNGLVGQWCGERPTVVVVSACYSG VFVPVLAAPNRLVMTAARSDRSSFGCGAGAIYPVFDNCVLDSLTSADDFVHLARLTRQCVTLREREQRLWPPSEPQAQIG TDVDDLFVFLNFERPAP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27779; Mature: 27779
Theoretical pI: Translated: 4.35; Mature: 4.35
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.7 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 2.7 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRLRHLFAGTLLWAACAAWPAQAEPVAEDVPLKDWAVGILAADWRDSEGAPIEAFENARR CCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHEEEEEECCCCCCCCCHHHHHHHHH DLARAFADVGFDADNITQLSLRPEQPGGAALRSDEVFTAFEQQAQSAQAGCLLYFTSHGV HHHHHHHHCCCCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHCCCCEEEEEECCCC PEGMVLGGEGLLSPAQLNGLVGQWCGERPTVVVVSACYSGVFVPVLAAPNRLVMTAARSD CCCEEECCCCCCCHHHHHHHHHHHCCCCCCEEEEEHHHCCCEEHHHCCCCEEEEEECCCC RSSFGCGAGAIYPVFDNCVLDSLTSADDFVHLARLTRQCVTLREREQRLWPPSEPQAQIG CCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHC TDVDDLFVFLNFERPAP CCHHHEEEEEECCCCCC >Mature Secondary Structure MRLRHLFAGTLLWAACAAWPAQAEPVAEDVPLKDWAVGILAADWRDSEGAPIEAFENARR CCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHEEEEEECCCCCCCCCHHHHHHHHH DLARAFADVGFDADNITQLSLRPEQPGGAALRSDEVFTAFEQQAQSAQAGCLLYFTSHGV HHHHHHHHCCCCCCCEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHCCCCEEEEEECCCC PEGMVLGGEGLLSPAQLNGLVGQWCGERPTVVVVSACYSGVFVPVLAAPNRLVMTAARSD CCCEEECCCCCCCHHHHHHHHHHHCCCCCCEEEEEHHHCCCEEHHHCCCCEEEEEECCCC RSSFGCGAGAIYPVFDNCVLDSLTSADDFVHLARLTRQCVTLREREQRLWPPSEPQAQIG CCCCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHC TDVDDLFVFLNFERPAP CCHHHEEEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA