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The map label for this gene is ydcN [C]

Identifier: 114798978

GI number: 114798978

Start: 2696432

End: 2696641

Strand: Reverse

Name: ydcN [C]

Synonym: HNE_2543

Alternate gene names: 114798978

Gene position: 2696641-2696432 (Counterclockwise)

Preceding gene: 114799894

Following gene: 114798203

Centisome position: 72.78

GC content: 58.57

Gene sequence:

>210_bases
ATGGATATCCGACAGAAATTTGGCAAACGGCTCCGCCAGCTGCGCGAAGAGCGCGGCTGGTCACAGGAAGAATTTGCGGA
CCGGGCAGGGCTACACAGGACTTACGTTTCGGCGGTGGAGCGGGGTGTCAGAAACCCCACGCTTTCGGTCCTGGAGCGGC
TGGCGAAGGCGCTGGACATTAAGCTTTCGGAATTAGTCCAGTCAGTGTGA

Upstream 100 bases:

>100_bases
CTATGAGTCTCATTGCCGCTCAGGTTGCGTCGGAGTTCAAGCGGAAAAAGAGACTCATAGTCTGTAGATCAATCGGCAAC
ATCGGCGTCGCTAGGGCGCC

Downstream 100 bases:

>100_bases
TGCGCTGGAATAGGAGTGCGCGTCACCAACCAAAAAGGTGCGCATCGATCTAGGGTAGCGGGATTTGTATCTCGCGGCTA
AGCTTTCATGATGAAAGATT

Product: DNA-binding protein

Products: NA

Alternate protein names: Transcriptional Regulator XRE Family Protein; Transcription Regulator; Transcriptional Regulator; Helix-Turn-Helix Domain-Containing Protein; MunI Regulatory Protein; Transcriptional Regulator XRE Family

Number of amino acids: Translated: 69; Mature: 69

Protein sequence:

>69_residues
MDIRQKFGKRLRQLREERGWSQEEFADRAGLHRTYVSAVERGVRNPTLSVLERLAKALDIKLSELVQSV

Sequences:

>Translated_69_residues
MDIRQKFGKRLRQLREERGWSQEEFADRAGLHRTYVSAVERGVRNPTLSVLERLAKALDIKLSELVQSV
>Mature_69_residues
MDIRQKFGKRLRQLREERGWSQEEFADRAGLHRTYVSAVERGVRNPTLSVLERLAKALDIKLSELVQSV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: 10-20 Molecules/Cell [C]

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 8038; Mature: 8038

Theoretical pI: Translated: 10.79; Mature: 10.79

Prosite motif: PS50943 HTH_CROC1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
1.4 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
1.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDIRQKFGKRLRQLREERGWSQEEFADRAGLHRTYVSAVERGVRNPTLSVLERLAKALDI
CCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH
KLSELVQSV
HHHHHHHHC
>Mature Secondary Structure
MDIRQKFGKRLRQLREERGWSQEEFADRAGLHRTYVSAVERGVRNPTLSVLERLAKALDI
CCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHH
KLSELVQSV
HHHHHHHHC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA