Definition Hyphomonas neptunium ATCC 15444 chromosome, complete genome.
Accession NC_008358
Length 3,705,021

Click here to switch to the map view.

The map label for this gene is 114798977

Identifier: 114798977

GI number: 114798977

Start: 3311506

End: 3312183

Strand: Direct

Name: 114798977

Synonym: HNE_3132

Alternate gene names: NA

Gene position: 3311506-3312183 (Clockwise)

Preceding gene: 114799743

Following gene: 114798652

Centisome position: 89.38

GC content: 60.77

Gene sequence:

>678_bases
GTGGAATTTGATGACGTTGTCCGCGAGCGGAGAAGTATCCGCGGGTTTCAGAAAAAGCCTGTTCCCAAGGCACTGATCCG
GGAAATCCTCGAGATCGCCATGCGGGCGCCCACGTCGCTGAATACCCAGCCCTGGAATTTCTATGTGGTGGCAGGCGAGG
TTCTCGACCGCATCCGGGCGGGGAATGTCGAGCGCAACATGGCCGGTGTGCCCGACAGCCGGGAGTTCCGCATGGGGCCG
GGCTATGAAGGCCCGCATCGCGAACGCCAGATCGAGATTGCCAAACAGCTGTTCGCCGCCATGGGCATCGAGCGGGAGAA
CAAGGAAAAGCGGATGGATTGGGTGCTGCGCGGTTTCCGCCAGTTTGATGCGCCCGTTTCGATCGTGGTGACCTATGACC
GCTCGATCCATGGCAGCGATATTGCGCCCTTTGACTGCGGCGGTGTCGTCAACTGCCTCGTCAATACCGCCTGGAACAAA
GGTCTGGGCTGCGTGATCAACAGCCAGGGCATCATGCAGAGCCCGGTTGTGCGCGCCGAAGCGGGCATTCCCGACGATCA
GGTGATCCAGACCTGCGTGGCCATGGGCTGGCCAGACGACAGCTTCCCCGCCAACGCCGTTGTTTCAAACCGGAAGTCCG
TCGATGAAGCCGCTGTCTTTGTCGGCTTTGACGACTGA

Upstream 100 bases:

>100_bases
GCCGCGCCGCGCTTTCCCTGTCGCAGCGTCAGGGGATGCCAGCGCCTGAGCCCGCGCTAGAGTTGCTGCGAACACAGAAA
ATGACAGGGAGGCCTTGGCC

Downstream 100 bases:

>100_bases
AAAATTGCTCTTCGCGCTTTGCCCCTGCCCCAGCGTGACCGCTGGCGCAGGCCTGAACGCGCGTTAAAATCAGGCATCCA
GTCAGAAGGAACAAGACCAT

Product: nitroreductase family protein

Products: NA

Alternate protein names: Nitroreductase Family Protein; Oxidoreductase; NfnB Protein; P-Nitrobenzoate Reductase; NADH Dehydrogenase; Nitrobenzoate Nitroreductase; Oxidoreductase Protein; Nitroreductase Family; Nitrobenzene Nitroreductase; Oxygen-Insensitive NAD(P)H Nitroreductase; Nitrobenzoate Reductase

Number of amino acids: Translated: 225; Mature: 225

Protein sequence:

>225_residues
MEFDDVVRERRSIRGFQKKPVPKALIREILEIAMRAPTSLNTQPWNFYVVAGEVLDRIRAGNVERNMAGVPDSREFRMGP
GYEGPHRERQIEIAKQLFAAMGIERENKEKRMDWVLRGFRQFDAPVSIVVTYDRSIHGSDIAPFDCGGVVNCLVNTAWNK
GLGCVINSQGIMQSPVVRAEAGIPDDQVIQTCVAMGWPDDSFPANAVVSNRKSVDEAAVFVGFDD

Sequences:

>Translated_225_residues
MEFDDVVRERRSIRGFQKKPVPKALIREILEIAMRAPTSLNTQPWNFYVVAGEVLDRIRAGNVERNMAGVPDSREFRMGP
GYEGPHRERQIEIAKQLFAAMGIERENKEKRMDWVLRGFRQFDAPVSIVVTYDRSIHGSDIAPFDCGGVVNCLVNTAWNK
GLGCVINSQGIMQSPVVRAEAGIPDDQVIQTCVAMGWPDDSFPANAVVSNRKSVDEAAVFVGFDD
>Mature_225_residues
MEFDDVVRERRSIRGFQKKPVPKALIREILEIAMRAPTSLNTQPWNFYVVAGEVLDRIRAGNVERNMAGVPDSREFRMGP
GYEGPHRERQIEIAKQLFAAMGIERENKEKRMDWVLRGFRQFDAPVSIVVTYDRSIHGSDIAPFDCGGVVNCLVNTAWNK
GLGCVINSQGIMQSPVVRAEAGIPDDQVIQTCVAMGWPDDSFPANAVVSNRKSVDEAAVFVGFDD

Specific function: Unknown

COG id: COG0778

COG function: function code C; Nitroreductase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25128; Mature: 25128

Theoretical pI: Translated: 5.42; Mature: 5.42

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MEFDDVVRERRSIRGFQKKPVPKALIREILEIAMRAPTSLNTQPWNFYVVAGEVLDRIRA
CCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCEEEEEHHHHHHHHHC
GNVERNMAGVPDSREFRMGPGYEGPHRERQIEIAKQLFAAMGIERENKEKRMDWVLRGFR
CCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHH
QFDAPVSIVVTYDRSIHGSDIAPFDCGGVVNCLVNTAWNKGLGCVINSQGIMQSPVVRAE
HHCCCEEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCEEECCCCCCCCCCHHHC
AGIPDDQVIQTCVAMGWPDDSFPANAVVSNRKSVDEAAVFVGFDD
CCCCHHHHHHHHHHHCCCCCCCCCHHHHHCCCCCCCEEEEEEECC
>Mature Secondary Structure
MEFDDVVRERRSIRGFQKKPVPKALIREILEIAMRAPTSLNTQPWNFYVVAGEVLDRIRA
CCHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCEEEEEHHHHHHHHHC
GNVERNMAGVPDSREFRMGPGYEGPHRERQIEIAKQLFAAMGIERENKEKRMDWVLRGFR
CCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHH
QFDAPVSIVVTYDRSIHGSDIAPFDCGGVVNCLVNTAWNKGLGCVINSQGIMQSPVVRAE
HHCCCEEEEEEECCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCEEECCCCCCCCCCHHHC
AGIPDDQVIQTCVAMGWPDDSFPANAVVSNRKSVDEAAVFVGFDD
CCCCHHHHHHHHHHHCCCCCCCCCHHHHHCCCCCCCEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA