Definition Hyphomonas neptunium ATCC 15444 chromosome, complete genome.
Accession NC_008358
Length 3,705,021

Click here to switch to the map view.

The map label for this gene is 114798968

Identifier: 114798968

GI number: 114798968

Start: 3588598

End: 3589083

Strand: Direct

Name: 114798968

Synonym: HNE_3451

Alternate gene names: NA

Gene position: 3588598-3589083 (Clockwise)

Preceding gene: 114798157

Following gene: 114799752

Centisome position: 96.86

GC content: 63.99

Gene sequence:

>486_bases
ATGGCCGAAGCCCTCAATCAGGACGCCCCGCTCCGCCGCTCTGCCGAAATCTGCCGCGGCACGCTGCGCCTCATGGGCGA
GATGGGCTATTACGGCGTCACCGAAATGACCCTGGCCAACAACCGCCGCGCAGATATTGCCAGCATTGGCCCGTCCGGTG
ACATCTGGATGATTGAAATCAAGTCCAGCATTCAGGACTTCAAATCCGACACCAAATGGCGGGAGTATATGGATTACTGC
GACCGGTTGAGCTTCGCTGTTGGCGCAGACTTCCCACAGGAACTCATCCCTCCGGAAGCGGGTCTGATCGTCGCCGATGC
CTTCTTCGGCGCGGTGATCCGGGAGGCGCCGGAGAGCCGGCTCGCGCCCGCCCGCCGCAAGGCCGTGACGCTGCGATTTG
GCCGTCTCGCCGCTGCCCGGCTCAGTGGCATAAGCGATACGGGCTGGACGCCGGGCGAGGACGGGCTTACCTCGCCCCTG
CCATGA

Upstream 100 bases:

>100_bases
CCGGCGCGCCGCCCAAGCGCCTCGATATTTCGGTGCCTTGACGATGAAACTTCGCCGGGCATAGGGTGGGGCACCAGAAC
AATACCGGAACGCCCCTGCC

Downstream 100 bases:

>100_bases
GCCTTGCCTATCCCGTTGCCCGCTCCCTTGAAGATGCCCTGAAACCTGACGCCCCCACGGCGCGCAGCCGCCGCGGTGCC
ATGTCGCTGGCCAATGGTCT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 161; Mature: 160

Protein sequence:

>161_residues
MAEALNQDAPLRRSAEICRGTLRLMGEMGYYGVTEMTLANNRRADIASIGPSGDIWMIEIKSSIQDFKSDTKWREYMDYC
DRLSFAVGADFPQELIPPEAGLIVADAFFGAVIREAPESRLAPARRKAVTLRFGRLAAARLSGISDTGWTPGEDGLTSPL
P

Sequences:

>Translated_161_residues
MAEALNQDAPLRRSAEICRGTLRLMGEMGYYGVTEMTLANNRRADIASIGPSGDIWMIEIKSSIQDFKSDTKWREYMDYC
DRLSFAVGADFPQELIPPEAGLIVADAFFGAVIREAPESRLAPARRKAVTLRFGRLAAARLSGISDTGWTPGEDGLTSPL
P
>Mature_160_residues
AEALNQDAPLRRSAEICRGTLRLMGEMGYYGVTEMTLANNRRADIASIGPSGDIWMIEIKSSIQDFKSDTKWREYMDYCD
RLSFAVGADFPQELIPPEAGLIVADAFFGAVIREAPESRLAPARRKAVTLRFGRLAAARLSGISDTGWTPGEDGLTSPLP

Specific function: Unknown

COG id: COG5321

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17657; Mature: 17526

Theoretical pI: Translated: 4.82; Mature: 4.82

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
3.7 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAEALNQDAPLRRSAEICRGTLRLMGEMGYYGVTEMTLANNRRADIASIGPSGDIWMIEI
CCCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCEEECCCCCCEEEEEE
KSSIQDFKSDTKWREYMDYCDRLSFAVGADFPQELIPPEAGLIVADAFFGAVIREAPESR
HHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCHHHCCCCCCEEHHHHHHHHHHHHCCHHH
LAPARRKAVTLRFGRLAAARLSGISDTGWTPGEDGLTSPLP
CCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
AEALNQDAPLRRSAEICRGTLRLMGEMGYYGVTEMTLANNRRADIASIGPSGDIWMIEI
CCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCEEECCCCCCEEEEEE
KSSIQDFKSDTKWREYMDYCDRLSFAVGADFPQELIPPEAGLIVADAFFGAVIREAPESR
HHHHHHHHCCCHHHHHHHHHHHHHHHHCCCCCHHHCCCCCCEEHHHHHHHHHHHHCCHHH
LAPARRKAVTLRFGRLAAARLSGISDTGWTPGEDGLTSPLP
CCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA