Click here to switch to the map view.

The map label for this gene is glbN [H]

Identifier: 114798956

GI number: 114798956

Start: 2735280

End: 2735675

Strand: Reverse

Name: glbN [H]

Synonym: HNE_2581

Alternate gene names: 114798956

Gene position: 2735675-2735280 (Counterclockwise)

Preceding gene: 114800077

Following gene: 114800080

Centisome position: 73.84

GC content: 59.6

Gene sequence:

>396_bases
GTGATAAGCAATGAGAACGCCGGCGCGGCGCCGCTGCCGGATGAAGACCTCTATGAAGTGTTCGGCGGCGAAGCAGGTGT
CAGCCGCATTGTCGACGATCTGGTGGAGCGCAGCCTCAATGATCCGCGCATCGCCGACATCTTCGCGGCCAGCGACCTGG
TGCGCCTGCGTCGGACACTGAAGGAGCAGTTCTGCTTTATCCTTGCCGGTCCGTGCGATTATACCGGCATGGACATGGCG
TCTTCCCACAAGGACCACGGCATCACCAACCGCGAATTCAATGCGCTGGTTGAGAATCTGCAACACGCCATGAATGCCGA
AAGCGTGCCTTTCCGTGCGCAGAATAAACTGCTTGCTGCGTTGGCGCCGATGCAGAGGGATGTGGTGACGCGCTGA

Upstream 100 bases:

>100_bases
GAAACTGCGTATCCTGCTCGCCGCAGCATTTTGCCTGTCGGCTCCGGCGTTCTCTCAGGAGGCGGATGTTCCGCCAGGCG
AGCTGCCGGTCGATCCCTAT

Downstream 100 bases:

>100_bases
CGGCGGGCGCGACCATCGCGATTGCCAGTCTTCCTGTGCCCGCCTAAGCTTCCTCCCGATGGCCGCAGAGCCATGGGGAG
GAAACAGATGTCTGTACGAA

Product: hypothetical protein

Products: NA

Alternate protein names: Truncated hemoglobin; trHbN; Hemoglobin-like protein HbN [H]

Number of amino acids: Translated: 131; Mature: 131

Protein sequence:

>131_residues
MISNENAGAAPLPDEDLYEVFGGEAGVSRIVDDLVERSLNDPRIADIFAASDLVRLRRTLKEQFCFILAGPCDYTGMDMA
SSHKDHGITNREFNALVENLQHAMNAESVPFRAQNKLLAALAPMQRDVVTR

Sequences:

>Translated_131_residues
MISNENAGAAPLPDEDLYEVFGGEAGVSRIVDDLVERSLNDPRIADIFAASDLVRLRRTLKEQFCFILAGPCDYTGMDMA
SSHKDHGITNREFNALVENLQHAMNAESVPFRAQNKLLAALAPMQRDVVTR
>Mature_131_residues
MISNENAGAAPLPDEDLYEVFGGEAGVSRIVDDLVERSLNDPRIADIFAASDLVRLRRTLKEQFCFILAGPCDYTGMDMA
SSHKDHGITNREFNALVENLQHAMNAESVPFRAQNKLLAALAPMQRDVVTR

Specific function: Binds oxygen cooperatively with very high affinity (P(50) = 0.013 mmHg at 20 degrees Celsius) because of a fast combination (25 microM(-1).s(-1)) and a slow dissociation (0.2 s(- 1)) rate [H]

COG id: COG2346

COG function: function code R; Truncated hemoglobins

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the truncated hemoglobin family. Group I subfamily [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012292
- InterPro:   IPR009050
- InterPro:   IPR019795
- InterPro:   IPR001486
- InterPro:   IPR016339 [H]

Pfam domain/function: PF01152 Bac_globin [H]

EC number: NA

Molecular weight: Translated: 14477; Mature: 14477

Theoretical pI: Translated: 4.61; Mature: 4.61

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
5.3 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
5.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MISNENAGAAPLPDEDLYEVFGGEAGVSRIVDDLVERSLNDPRIADIFAASDLVRLRRTL
CCCCCCCCCCCCCCHHHHHHHCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHH
KEQFCFILAGPCDYTGMDMASSHKDHGITNREFNALVENLQHAMNAESVPFRAQNKLLAA
HHHHHHHCCCCCCCCCCCCHHCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHH
LAPMQRDVVTR
HHHHHHHHCCC
>Mature Secondary Structure
MISNENAGAAPLPDEDLYEVFGGEAGVSRIVDDLVERSLNDPRIADIFAASDLVRLRRTL
CCCCCCCCCCCCCCHHHHHHHCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHH
KEQFCFILAGPCDYTGMDMASSHKDHGITNREFNALVENLQHAMNAESVPFRAQNKLLAA
HHHHHHHCCCCCCCCCCCCHHCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCHHHHHHHHH
LAPMQRDVVTR
HHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10500158; 12788972 [H]