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The map label for this gene is ompR [H]

Identifier: 114798914

GI number: 114798914

Start: 3269748

End: 3270437

Strand: Direct

Name: ompR [H]

Synonym: HNE_3093

Alternate gene names: 114798914

Gene position: 3269748-3270437 (Clockwise)

Preceding gene: 114799516

Following gene: 114798347

Centisome position: 88.25

GC content: 64.06

Gene sequence:

>690_bases
ATGAGCCTCAAAGACCCCGCCCATATTCTGATCGTGGATGATGACGACCGCATCCGGGATCTGACCAAGCGCTTCCTGAC
GCTGAAGGGATACCGGGTGACGAGCGCGCCCGATGCGGCCGGGGCGCGCCGTCTGATGGACAACATGACCTTCGATCTGG
CGGTGCTCGACATCATGATGCCGGGAGAAACCGGTCTGGAACTGCTGGACCGCATCCGCTCCGGCCCGGCGCGGGCCACC
CCGGTCATGCTGCTGACGGCGCGGGGTGAAGCGCGCGACCGGATCGAGGGGCTGCGCCTTGGCGCCGATGACTATCTCGC
CAAGCCGTTTGAACCCGAAGAGCTGGTCCTGCGCTGTGAAGCCATTCTCCGCCGCTCGCAGAAGCCTGCCCCACCGCCGG
AAGAAATCGAGATGTCAGGTCTCGTCTTCAATATCGAGCGCGGCGAACTGAAAGCAGGTGACCAGCGCATCCGCCTGACG
GACGCTGAAGTCCAGCTGCTGACAATCCTTGCCCGGATGCCGGGTGAAGCGATCAGCCGGGAAGACCTTGCCGAGATGAC
CTCGGCGGGCATGGAACGCTCGGTCGATGTGCAGGTCACACGCCTGCGCCGCAAGATCGAGCCCAACCCCAAAGAACCGA
TCCATATCCAGACCGTGCGGGGCGTCGGCTACCGCCTGATGCCGGATTGA

Upstream 100 bases:

>100_bases
CTGCGCGAGCGCCTGCGGGTAGCCTTCCGCGCCTGTGGACCTGAAGCTGTCGCCGGCGCACGCTTCATGCTGGAAGCCCT
GGTGAAGTGAGGGCGATGCC

Downstream 100 bases:

>100_bases
AACCCCGAATGCTCCGCCTGCGCGACATTACCCCCCGCGGTCTCTACGCCCGCAGCCTGCTGCTGATCCTCGCGCCCGTC
CTGCTGATCCTGGGTCTGAT

Product: DNA-binding response regulator OmpR

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 229; Mature: 228

Protein sequence:

>229_residues
MSLKDPAHILIVDDDDRIRDLTKRFLTLKGYRVTSAPDAAGARRLMDNMTFDLAVLDIMMPGETGLELLDRIRSGPARAT
PVMLLTARGEARDRIEGLRLGADDYLAKPFEPEELVLRCEAILRRSQKPAPPPEEIEMSGLVFNIERGELKAGDQRIRLT
DAEVQLLTILARMPGEAISREDLAEMTSAGMERSVDVQVTRLRRKIEPNPKEPIHIQTVRGVGYRLMPD

Sequences:

>Translated_229_residues
MSLKDPAHILIVDDDDRIRDLTKRFLTLKGYRVTSAPDAAGARRLMDNMTFDLAVLDIMMPGETGLELLDRIRSGPARAT
PVMLLTARGEARDRIEGLRLGADDYLAKPFEPEELVLRCEAILRRSQKPAPPPEEIEMSGLVFNIERGELKAGDQRIRLT
DAEVQLLTILARMPGEAISREDLAEMTSAGMERSVDVQVTRLRRKIEPNPKEPIHIQTVRGVGYRLMPD
>Mature_228_residues
SLKDPAHILIVDDDDRIRDLTKRFLTLKGYRVTSAPDAAGARRLMDNMTFDLAVLDIMMPGETGLELLDRIRSGPARATP
VMLLTARGEARDRIEGLRLGADDYLAKPFEPEELVLRCEAILRRSQKPAPPPEEIEMSGLVFNIERGELKAGDQRIRLTD
AEVQLLTILARMPGEAISREDLAEMTSAGMERSVDVQVTRLRRKIEPNPKEPIHIQTVRGVGYRLMPD

Specific function: Necessary for photosynthetic and respiratory growth. Probable promoter-specific protein mediating the interaction between DNA and RNA polymerase [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 response regulatory domain [H]

Homologues:

Organism=Escherichia coli, GI1789809, Length=236, Percent_Identity=41.5254237288136, Blast_Score=173, Evalue=7e-45,
Organism=Escherichia coli, GI1786599, Length=223, Percent_Identity=38.1165919282511, Blast_Score=137, Evalue=4e-34,
Organism=Escherichia coli, GI1787229, Length=235, Percent_Identity=36.1702127659575, Blast_Score=124, Evalue=4e-30,
Organism=Escherichia coli, GI2367329, Length=226, Percent_Identity=38.9380530973451, Blast_Score=123, Evalue=9e-30,
Organism=Escherichia coli, GI1786784, Length=226, Percent_Identity=36.283185840708, Blast_Score=121, Evalue=5e-29,
Organism=Escherichia coli, GI1787375, Length=228, Percent_Identity=34.2105263157895, Blast_Score=118, Evalue=3e-28,
Organism=Escherichia coli, GI1790863, Length=233, Percent_Identity=33.4763948497854, Blast_Score=117, Evalue=8e-28,
Organism=Escherichia coli, GI87082012, Length=224, Percent_Identity=35.2678571428571, Blast_Score=114, Evalue=6e-27,
Organism=Escherichia coli, GI1788394, Length=225, Percent_Identity=33.7777777777778, Blast_Score=109, Evalue=2e-25,
Organism=Escherichia coli, GI1790552, Length=225, Percent_Identity=34.2222222222222, Blast_Score=104, Evalue=4e-24,
Organism=Escherichia coli, GI1786911, Length=226, Percent_Identity=32.3008849557522, Blast_Score=103, Evalue=1e-23,
Organism=Escherichia coli, GI1790860, Length=226, Percent_Identity=32.7433628318584, Blast_Score=100, Evalue=7e-23,
Organism=Escherichia coli, GI1789402, Length=222, Percent_Identity=32.8828828828829, Blast_Score=99, Evalue=2e-22,
Organism=Escherichia coli, GI145693140, Length=234, Percent_Identity=29.0598290598291, Blast_Score=86, Evalue=2e-18,
Organism=Escherichia coli, GI1788550, Length=109, Percent_Identity=39.4495412844037, Blast_Score=78, Evalue=5e-16,
Organism=Escherichia coli, GI1787487, Length=116, Percent_Identity=35.3448275862069, Blast_Score=63, Evalue=2e-11,
Organism=Escherichia coli, GI1790299, Length=132, Percent_Identity=31.0606060606061, Blast_Score=62, Evalue=3e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011006
- InterPro:   IPR001867
- InterPro:   IPR001789
- InterPro:   IPR011991 [H]

Pfam domain/function: PF00072 Response_reg; PF00486 Trans_reg_C [H]

EC number: NA

Molecular weight: Translated: 25708; Mature: 25577

Theoretical pI: Translated: 5.26; Mature: 5.26

Prosite motif: PS50110 RESPONSE_REGULATORY

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
4.8 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
4.4 %Met     (Mature Protein)
4.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLKDPAHILIVDDDDRIRDLTKRFLTLKGYRVTSAPDAAGARRLMDNMTFDLAVLDIMM
CCCCCCCEEEEECCCHHHHHHHHHHHHHCCEEECCCCCHHHHHHHHHCCCCEEEEEEEEC
PGETGLELLDRIRSGPARATPVMLLTARGEARDRIEGLRLGADDYLAKPFEPEELVLRCE
CCCHHHHHHHHHHCCCCCCCEEEEEEECCCHHHHHHHEEECCHHHHCCCCCHHHHHHHHH
AILRRSQKPAPPPEEIEMSGLVFNIERGELKAGDQRIRLTDAEVQLLTILARMPGEAISR
HHHHHCCCCCCCCCCEEECCEEEEEECCCCCCCCCEEEEEHHHHHHHHHHHHCCCCCCCH
EDLAEMTSAGMERSVDVQVTRLRRKIEPNPKEPIHIQTVRGVGYRLMPD
HHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCEEEEEECCCCEEECCC
>Mature Secondary Structure 
SLKDPAHILIVDDDDRIRDLTKRFLTLKGYRVTSAPDAAGARRLMDNMTFDLAVLDIMM
CCCCCCEEEEECCCHHHHHHHHHHHHHCCEEECCCCCHHHHHHHHHCCCCEEEEEEEEC
PGETGLELLDRIRSGPARATPVMLLTARGEARDRIEGLRLGADDYLAKPFEPEELVLRCE
CCCHHHHHHHHHHCCCCCCCEEEEEEECCCHHHHHHHEEECCHHHHCCCCCHHHHHHHHH
AILRRSQKPAPPPEEIEMSGLVFNIERGELKAGDQRIRLTDAEVQLLTILARMPGEAISR
HHHHHCCCCCCCCCCEEECCEEEEEECCCCCCCCCEEEEEHHHHHHHHHHHHCCCCCCCH
EDLAEMTSAGMERSVDVQVTRLRRKIEPNPKEPIHIQTVRGVGYRLMPD
HHHHHHHHHCCCCCCHHHHHHHHHHCCCCCCCCEEEEEECCCCEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1323023 [H]