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The map label for this gene is dxnH [H]

Identifier: 114798879

GI number: 114798879

Start: 3052527

End: 3053153

Strand: Reverse

Name: dxnH [H]

Synonym: HNE_2893

Alternate gene names: 114798879

Gene position: 3053153-3052527 (Counterclockwise)

Preceding gene: 114799898

Following gene: 114797362

Centisome position: 82.41

GC content: 62.04

Gene sequence:

>627_bases
ATGGCCTGGACACGCGATGATATGGCGGCGCGGGCCGCGCAGGAGCTGAAGGACGGGATGTATGTGAACCTTGGCATCGG
GATTCCGACGCTGGTGGCGAACCATATTCCGGCGGGCGTGAATGTGACGCTGCAATCGGAAAACGGCATGCTGGGCATGG
GGCCGTTTCCGTTTGAGGGCGAGGAAGACGCCGACCTGATCAATGCCGGAAAGCAGACGATCACGGAGCTTCCGCATACG
GCTTATTTTGACAGCGCGACCTCTTTTGCGATGATCCGGGGCGGCAAGATCGCGATGGCGATCCTGGGCGCGATGGAAGT
GGCGGAGAATGGCGACCTCGCCAACTGGATGATCCCCGGCAAGCTCGTGAAGGGCATGGGCGGGGCGATGGACCTTGTGG
CGGGCGTTGGCCGCGTGGTGGTCGTGATGGATCACGCCAACAAGGCGGGCGAGAGCAAGGTGCTGAAAGAATGCACGCTG
CCGCTGACGGGGAAGGCCGTGGTTGACCGGATCATCACCGATCTTTGCGTGATGGATGTGGTCGAGGGCGGGCTGAAGCT
GGTGGAGCTGGCGCCGGGCGTGACTGAGGATGAGGTTCGGGCGAAGACTGAGGCGAAGCTTATTTAG

Upstream 100 bases:

>100_bases
ATGGCATTCACCTGCCGGGGATTTATGTGCACCGGATTGTGCAGGGGACGCATGAGAAGCGGATTGAGCAGCGCACTGTG
CGGAAGAGGGAGGCAAGCTG

Downstream 100 bases:

>100_bases
ATGGCTCGGTGCTGTCCGTGCAAAGAAAAAGGCCGCCCTTGGGCGGCCTTTTGTTATTTCGCGCGATAGTCCCGCATCAG
GCCCGCGAAGCGGGTGAAGA

Product: 3-oxoadipate CoA-succinyl transferase subunit beta

Products: NA

Alternate protein names: OXCT B; Succinyl CoA:3-oxoacid CoA-transferase [H]

Number of amino acids: Translated: 208; Mature: 207

Protein sequence:

>208_residues
MAWTRDDMAARAAQELKDGMYVNLGIGIPTLVANHIPAGVNVTLQSENGMLGMGPFPFEGEEDADLINAGKQTITELPHT
AYFDSATSFAMIRGGKIAMAILGAMEVAENGDLANWMIPGKLVKGMGGAMDLVAGVGRVVVVMDHANKAGESKVLKECTL
PLTGKAVVDRIITDLCVMDVVEGGLKLVELAPGVTEDEVRAKTEAKLI

Sequences:

>Translated_208_residues
MAWTRDDMAARAAQELKDGMYVNLGIGIPTLVANHIPAGVNVTLQSENGMLGMGPFPFEGEEDADLINAGKQTITELPHT
AYFDSATSFAMIRGGKIAMAILGAMEVAENGDLANWMIPGKLVKGMGGAMDLVAGVGRVVVVMDHANKAGESKVLKECTL
PLTGKAVVDRIITDLCVMDVVEGGLKLVELAPGVTEDEVRAKTEAKLI
>Mature_207_residues
AWTRDDMAARAAQELKDGMYVNLGIGIPTLVANHIPAGVNVTLQSENGMLGMGPFPFEGEEDADLINAGKQTITELPHTA
YFDSATSFAMIRGGKIAMAILGAMEVAENGDLANWMIPGKLVKGMGGAMDLVAGVGRVVVVMDHANKAGESKVLKECTLP
LTGKAVVDRIITDLCVMDVVEGGLKLVELAPGVTEDEVRAKTEAKLI

Specific function: SHORT-CHAIN FATTY ACIDS METABOLISM. [C]

COG id: COG2057

COG function: function code I; Acyl CoA:acetate/3-ketoacid CoA transferase, beta subunit

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the 3-oxoacid CoA-transferase subunit B family [H]

Homologues:

Organism=Homo sapiens, GI4557817, Length=201, Percent_Identity=57.2139303482587, Blast_Score=231, Evalue=4e-61,
Organism=Homo sapiens, GI11545841, Length=201, Percent_Identity=58.2089552238806, Blast_Score=223, Evalue=8e-59,
Organism=Escherichia coli, GI1788552, Length=203, Percent_Identity=50.7389162561576, Blast_Score=210, Evalue=6e-56,
Organism=Caenorhabditis elegans, GI17531517, Length=206, Percent_Identity=57.7669902912621, Blast_Score=236, Evalue=7e-63,
Organism=Drosophila melanogaster, GI21358325, Length=205, Percent_Identity=58.5365853658537, Blast_Score=239, Evalue=1e-63,
Organism=Drosophila melanogaster, GI24655794, Length=205, Percent_Identity=58.5365853658537, Blast_Score=238, Evalue=2e-63,

Paralogues:

None

Copy number: 369 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012791
- InterPro:   IPR004165
- InterPro:   IPR004164 [H]

Pfam domain/function: PF01144 CoA_trans [H]

EC number: =2.8.3.5 [H]

Molecular weight: Translated: 21909; Mature: 21778

Theoretical pI: Translated: 4.50; Mature: 4.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
6.2 %Met     (Translated Protein)
7.2 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
5.8 %Met     (Mature Protein)
6.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAWTRDDMAARAAQELKDGMYVNLGIGIPTLVANHIPAGVNVTLQSENGMLGMGPFPFEG
CCCCHHHHHHHHHHHHHCCEEEEECCCHHHHHHHCCCCCCEEEEECCCCEEECCCCCCCC
EEDADLINAGKQTITELPHTAYFDSATSFAMIRGGKIAMAILGAMEVAENGDLANWMIPG
CCCHHHHHHHHHHHHHCCCHHECCCCCCEEEEECCHHHHHHHHHHHHHCCCCCCEEECCH
KLVKGMGGAMDLVAGVGRVVVVMDHANKAGESKVLKECTLPLTGKAVVDRIITDLCVMDV
HHHHCCCHHHHHHHCCCEEEEEEECCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHH
VEGGLKLVELAPGVTEDEVRAKTEAKLI
HHCCEEEEEECCCCCHHHHHHHHHHCCC
>Mature Secondary Structure 
AWTRDDMAARAAQELKDGMYVNLGIGIPTLVANHIPAGVNVTLQSENGMLGMGPFPFEG
CCCHHHHHHHHHHHHHCCEEEEECCCHHHHHHHCCCCCCEEEEECCCCEEECCCCCCCC
EEDADLINAGKQTITELPHTAYFDSATSFAMIRGGKIAMAILGAMEVAENGDLANWMIPG
CCCHHHHHHHHHHHHHCCCHHECCCCCCEEEEECCHHHHHHHHHHHHHCCCCCCEEECCH
KLVKGMGGAMDLVAGVGRVVVVMDHANKAGESKVLKECTLPLTGKAVVDRIITDLCVMDV
HHHHCCCHHHHHHHCCCEEEEEEECCCCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHHH
VEGGLKLVELAPGVTEDEVRAKTEAKLI
HHCCEEEEEECCCCCHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9385134 [H]