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The map label for this gene is ygaD [C]

Identifier: 114798844

GI number: 114798844

Start: 2093883

End: 2094344

Strand: Direct

Name: ygaD [C]

Synonym: HNE_2017

Alternate gene names: 114798844

Gene position: 2093883-2094344 (Clockwise)

Preceding gene: 114797752

Following gene: 114798090

Centisome position: 56.51

GC content: 66.67

Gene sequence:

>462_bases
ATGCTGGTGCTCGATGATGCCGAGCGGGCCCGCCTGAAGATCGTGACCGCAGAGAGCTGTACCGGGGGGCTCGTCGCGGC
GCTGCTGACCGATATTGCCGGCTCCTCCTCCGTGTTCGAGAGGGGCTTTGTGACCTATTCCAACAAGGCCAAGGAAGAGA
TGCTGGGCGTGCCCGGCGATGTGCTGGCCGATTTCGGGGCGGTCTCCGAGCCGGTGGCGCGGATGATGGCCGAAGGCGCG
ATGGCCAACAGCCGGGCGAACATCTCCGTGGCGATTACCGGCGTTGCGGGGCCGGGCGGCGGTACACGGATGAAACCTGT
GGGCACCGTCCACATCGCCTGCGCGCGGGAGAACCGGGCCGTGCTGCACGAAATGCTGCAACTGGGCGACATTGGCCGCG
AGGGCATCCGCATGGCGGCGGTTGAGACGGCGCTGAACTTGATTCAGGCGCAGACGCGGTAG

Upstream 100 bases:

>100_bases
CGCCGCGGCCTTCATCGAAAAGCGAACGCCGGTCTTCACGGGCAACTGATCGGGCGCTAGACAGGTGACCATGTTTCCAG
ATCGCCTTCGTAACCTCGCC

Downstream 100 bases:

>100_bases
GGTGGGCTGGCTGCCAACTGATTCATTCAAACGGTTTTCAGGGCTGAGAGCGCCCCCACCCTAGCCCTCCCCATAGTCAT
GGGGAGGGGACCTGTTGCGT

Product: CinA domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 153; Mature: 153

Protein sequence:

>153_residues
MLVLDDAERARLKIVTAESCTGGLVAALLTDIAGSSSVFERGFVTYSNKAKEEMLGVPGDVLADFGAVSEPVARMMAEGA
MANSRANISVAITGVAGPGGGTRMKPVGTVHIACARENRAVLHEMLQLGDIGREGIRMAAVETALNLIQAQTR

Sequences:

>Translated_153_residues
MLVLDDAERARLKIVTAESCTGGLVAALLTDIAGSSSVFERGFVTYSNKAKEEMLGVPGDVLADFGAVSEPVARMMAEGA
MANSRANISVAITGVAGPGGGTRMKPVGTVHIACARENRAVLHEMLQLGDIGREGIRMAAVETALNLIQAQTR
>Mature_153_residues
MLVLDDAERARLKIVTAESCTGGLVAALLTDIAGSSSVFERGFVTYSNKAKEEMLGVPGDVLADFGAVSEPVARMMAEGA
MANSRANISVAITGVAGPGGGTRMKPVGTVHIACARENRAVLHEMLQLGDIGREGIRMAAVETALNLIQAQTR

Specific function: Unknown

COG id: COG1546

COG function: function code R; Uncharacterized protein (competence- and mitomycin-induced)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the CinA family [H]

Homologues:

Organism=Escherichia coli, GI1789052, Length=139, Percent_Identity=51.0791366906475, Blast_Score=129, Evalue=6e-32,
Organism=Escherichia coli, GI1787818, Length=116, Percent_Identity=41.3793103448276, Blast_Score=86, Evalue=1e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008136
- InterPro:   IPR008135
- InterPro:   IPR001453 [H]

Pfam domain/function: PF02464 CinA; PF00994 MoCF_biosynth [H]

EC number: NA

Molecular weight: Translated: 15913; Mature: 15913

Theoretical pI: Translated: 5.77; Mature: 5.77

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
5.2 %Met     (Translated Protein)
6.5 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
5.2 %Met     (Mature Protein)
6.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLVLDDAERARLKIVTAESCTGGLVAALLTDIAGSSSVFERGFVTYSNKAKEEMLGVPGD
CEEECCCCCCEEEEEECCCCCCHHHHHHHHHHCCCHHHHHCCCEEECCCHHHHHCCCCHH
VLADFGAVSEPVARMMAEGAMANSRANISVAITGVAGPGGGTRMKPVGTVHIACARENRA
HHHHHCCCHHHHHHHHHHCCCCCCCCCEEEEEEEEECCCCCCCCCCCCEEEEEEECCCHH
VLHEMLQLGDIGREGIRMAAVETALNLIQAQTR
HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MLVLDDAERARLKIVTAESCTGGLVAALLTDIAGSSSVFERGFVTYSNKAKEEMLGVPGD
CEEECCCCCCEEEEEECCCCCCHHHHHHHHHHCCCHHHHHCCCEEECCCHHHHHCCCCHH
VLADFGAVSEPVARMMAEGAMANSRANISVAITGVAGPGGGTRMKPVGTVHIACARENRA
HHHHHCCCHHHHHHHHHHCCCCCCCCCEEEEEEEEECCCCCCCCCCCCEEEEEEECCCHH
VLHEMLQLGDIGREGIRMAAVETALNLIQAQTR
HHHHHHHHHCCCHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA