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The map label for this gene is phaR

Identifier: 114798839

GI number: 114798839

Start: 3547412

End: 3548002

Strand: Reverse

Name: phaR

Synonym: HNE_3403

Alternate gene names: NA

Gene position: 3548002-3547412 (Counterclockwise)

Preceding gene: 114798676

Following gene: 114798739

Centisome position: 95.76

GC content: 57.87

Gene sequence:

>591_bases
ATGGCGAGACATTCAGGCTCAGGTGGGCCGATAATCATAAAGAAGTACGCAAACCGGCGTCTCTATGACACGTCAACGTC
TTCCTATGTCACTTTGGAACACTTGTCAGATCTTGTCCGCGAGGGGCAGGACTTTGAAGTCAGGGACGCCAAGACTGGCG
AGGATCTGACCCGTCAGGTGCTAACCCAGATCATTTTCGAGCATGAAACGAAGGGCCAGGGCGCCCTGCCGCTGAACTTC
CTGCGCCAGCTGATCGGCTTTTATGGCGGCGGCGCGCAGGCTTATCTGCCGTCTTTCCTTGAGATGTCGATGAACAGCTT
TTCCCAGGCGCAGAAGGAGTGGCGCAAGGCCGCCAACCCGATGGGCCTGTTCGAGGCCCAGACGCGCCGCAATATGGTGA
TGTTCGAGCAGGCGATGAAGATGTTCATGCCCGGCGTTGCCCCCACCCGGTCAGCGGCGGAAGAACCTTCCGCTGGCGGT
CAGGTGCCATCCAATCCGTTCATGGAATATCAGGCCGAAGCCCTCGCTGCGATGCAGGAGCAGATGGAAGCCATCCAGAA
GCAGTTGGCCGATCTTTCCCGCAAGGAATAA

Upstream 100 bases:

>100_bases
ACATCAATAGCGCATTGGTCTTGTGAGGGTTCTGTGCAAATATTTCGCACTAGCACAATAATTGCTTGCTCCATTGCAGG
GCAGCGGACGAGGTGAGGAC

Downstream 100 bases:

>100_bases
GACCGGCCAACAGCCCCGATTTCCGGACAATCAGACGTCGCCTGCCACGCCAAAGTCCCGGCGGGCAGAGACGATGGTGA
CGATGACGCCCGCCAGAACA

Product: polyhydroxyalkanoate synthesis repressor PhaR

Products: NA

Alternate protein names: ORF4 [H]

Number of amino acids: Translated: 196; Mature: 195

Protein sequence:

>196_residues
MARHSGSGGPIIIKKYANRRLYDTSTSSYVTLEHLSDLVREGQDFEVRDAKTGEDLTRQVLTQIIFEHETKGQGALPLNF
LRQLIGFYGGGAQAYLPSFLEMSMNSFSQAQKEWRKAANPMGLFEAQTRRNMVMFEQAMKMFMPGVAPTRSAAEEPSAGG
QVPSNPFMEYQAEALAAMQEQMEAIQKQLADLSRKE

Sequences:

>Translated_196_residues
MARHSGSGGPIIIKKYANRRLYDTSTSSYVTLEHLSDLVREGQDFEVRDAKTGEDLTRQVLTQIIFEHETKGQGALPLNF
LRQLIGFYGGGAQAYLPSFLEMSMNSFSQAQKEWRKAANPMGLFEAQTRRNMVMFEQAMKMFMPGVAPTRSAAEEPSAGG
QVPSNPFMEYQAEALAAMQEQMEAIQKQLADLSRKE
>Mature_195_residues
ARHSGSGGPIIIKKYANRRLYDTSTSSYVTLEHLSDLVREGQDFEVRDAKTGEDLTRQVLTQIIFEHETKGQGALPLNFL
RQLIGFYGGGAQAYLPSFLEMSMNSFSQAQKEWRKAANPMGLFEAQTRRNMVMFEQAMKMFMPGVAPTRSAAEEPSAGGQ
VPSNPFMEYQAEALAAMQEQMEAIQKQLADLSRKE

Specific function: Unknown

COG id: COG5394

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012909
- InterPro:   IPR010134
- InterPro:   IPR007897 [H]

Pfam domain/function: PF05233 PHB_acc; PF07879 PHB_acc_N [H]

EC number: NA

Molecular weight: Translated: 21937; Mature: 21806

Theoretical pI: Translated: 6.28; Mature: 6.28

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
6.1 %Met     (Translated Protein)
6.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
5.6 %Met     (Mature Protein)
5.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MARHSGSGGPIIIKKYANRRLYDTSTSSYVTLEHLSDLVREGQDFEVRDAKTGEDLTRQV
CCCCCCCCCCEEEECCCCCEEECCCCCCEEEHHHHHHHHHCCCCCCCCCCCCCHHHHHHH
LTQIIFEHETKGQGALPLNFLRQLIGFYGGGAQAYLPSFLEMSMNSFSQAQKEWRKAANP
HHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
MGLFEAQTRRNMVMFEQAMKMFMPGVAPTRSAAEEPSAGGQVPSNPFMEYQAEALAAMQE
CCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHCCCCCCCCCCCCCCHHHHHHHHHHHHHH
QMEAIQKQLADLSRKE
HHHHHHHHHHHHHCCC
>Mature Secondary Structure 
ARHSGSGGPIIIKKYANRRLYDTSTSSYVTLEHLSDLVREGQDFEVRDAKTGEDLTRQV
CCCCCCCCCEEEECCCCCEEECCCCCCEEEHHHHHHHHHCCCCCCCCCCCCCHHHHHHH
LTQIIFEHETKGQGALPLNFLRQLIGFYGGGAQAYLPSFLEMSMNSFSQAQKEWRKAANP
HHHHHHHHCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
MGLFEAQTRRNMVMFEQAMKMFMPGVAPTRSAAEEPSAGGQVPSNPFMEYQAEALAAMQE
CCHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHCCCCCCCCCCCCCCHHHHHHHHHHHHHH
QMEAIQKQLADLSRKE
HHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1396692 [H]