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The map label for this gene is allB [C]

Identifier: 114798786

GI number: 114798786

Start: 3658543

End: 3660282

Strand: Direct

Name: allB [C]

Synonym: HNE_3525

Alternate gene names: 114798786

Gene position: 3658543-3660282 (Clockwise)

Preceding gene: 114797795

Following gene: 114799299

Centisome position: 98.75

GC content: 64.25

Gene sequence:

>1740_bases
ATGGCAACTCATGACCTGATCATTCGCGGCGGCACCATCATTGATGGTAGCGGCGGCCCGTCATTCGAGGGCGACGTGGC
CGTTTCCGGCGGCGTCATAACAGACGTCGGCAAGATAAACGGCAAGGGCATCGAGGAAATCGACGCGCGCGGCCAGGTGG
TGACGCCGGGCTTTGTGGACCTTCACACCCATTATGATGGCCAGGTCGCCTGGGGCGAGGCGATCAGCCCGTCATCGCTT
CACGGCGTAACCACGGTTGTGATGGGCAATTGCGGCGTTGGCTTTGCGCCCTGCAAGACCGAGGATCACGACCGCCTCAT
CCGCCTGATGGAAGGCGTGGAGGACATCCCCTTCCCTGTTCTCTCTCAGGGTCTGCCCTGGGCGTGGGAGAGCTTTCCCG
ATTATCTCGACTTTCTCTCCACCCGCCGGTTCGACACCGATGTCTGTGCGCAGCTTCCCCATGCCGCGCTGCGTGTGTTC
GTGATGGGCGACCGGGGCGCCAACCGTGAAGACGCAACGCCAGAAGATATTGCCGCAATGGCCAAGCTCGCCAAGGAAGC
CGTGATCGCCGGGGCGATGGGCTTTACCACCTCGCGCACGCTCAACCACCGCACCTCGGATGGCCAGCCTACCCCGACAC
TGACGGCGTCTGAAGCCGAACTGACCGGCATCGGAATGGGCCTTGCTGAAGCCGGGCGCGGCGTGTTGCAATTTGTGTCT
GACTTCGATGATCCGCAGAAGGAAGCGGCCATGCTGCGCCGGATCGTCGAGAAGACCGGCCGGCCATTGTCTGTGTCGCT
GGCGCAGTCCGATGTTGCCCCCAATGGCTGGCGGCATCTGCTCGGCGCCATTGAGGCGGCGGCCGCTGACGGCATACCGA
TTCGCGCCCAGGTCGCCCCGCGCCCCGTGGGCGTGTTGCTGGGGCTCGACCTGACAATGAACCCGTTCAGCGCCCACCCC
ACCTATCGCGAAATTGCCGATCTTCCGCTCCCGGAACGTGTCGCACGCCTGCGCGACCCGGAGTTCCGCGCGCGGCTTCT
GGCGGACGCGCCGCAGACGGATAATCCGTTTGCCAAATCCATGCTGCGCAATTTCGGCAAGATCTTCCAGCTGACCGATC
CGGTGAATTATGAGCCCGGCCCGGAGCATACGCTGGCGGCGATGGCCGAAGCGCGCGGCGTCTCTCCTGAAGCGGTGGCG
CTGGACCTGATGCTGGAGCGGGACGGCAATGGCATGCTCTACCTGCCCTTCCTGAATTATGCTCAGGGTACGCTCGATCC
GATCATGGAAATGATGCAGAGCCCGGCCACTCTGCCCGGCCTGTCTGATGGGGGGGCACATGTCGGCATGATCTGTGATG
GCTCGTTCACCTCAACGATGCTGACCCATTGGGTACGTGACCGGACGAAGGGACAGAAGCTCTCTGTCGAGAGCATTGTT
CACCGCCAGGCCCGCAAGACCGCCGAATGGATCGGCCTATGGGACCGGGGCCTGATTGCGCCGGGCTACCGGGCCGATCT
CAACGTGATCGACCTTGCCAATATGAAGCTTCACCTGCCCAACGTGATCCGCGACCTGCCCGCAGGCGGACGCCGCCTGA
TGCAGCGCGCCTCAGGCTATACCGCCACGATCCTCAAAGGTGAGATCACCCACCGGGACGGCGACCCGACCGGGAAACTC
CCCGGCAACCTCGTCCGCGGGGCGCGCCAGGCCCCGGCGCAGGCGATGGCGGCGGAGTAG

Upstream 100 bases:

>100_bases
CACCGCCGGGCACGTATTTTGACAGAGGGGGAAGCGGCGTCAGGGTTTGACACCGCTTCCCCTTAAGGCATGCTCCCCCC
AAACACCGGAGGACTTCGCC

Downstream 100 bases:

>100_bases
GCGTCAGCTCGCCTTGATACCAACCAACGCCTTGGCGAAGGCCTCCGCACTGAACGGGCGGAGGTCTTCGGCCCGCTCGC
CAATACCAATGAAATGGATG

Product: amidohydrolase family protein/D-aminoacylase domain-containing protein

Products: Allantoate; H+ [C]

Alternate protein names: NA

Number of amino acids: Translated: 579; Mature: 578

Protein sequence:

>579_residues
MATHDLIIRGGTIIDGSGGPSFEGDVAVSGGVITDVGKINGKGIEEIDARGQVVTPGFVDLHTHYDGQVAWGEAISPSSL
HGVTTVVMGNCGVGFAPCKTEDHDRLIRLMEGVEDIPFPVLSQGLPWAWESFPDYLDFLSTRRFDTDVCAQLPHAALRVF
VMGDRGANREDATPEDIAAMAKLAKEAVIAGAMGFTTSRTLNHRTSDGQPTPTLTASEAELTGIGMGLAEAGRGVLQFVS
DFDDPQKEAAMLRRIVEKTGRPLSVSLAQSDVAPNGWRHLLGAIEAAAADGIPIRAQVAPRPVGVLLGLDLTMNPFSAHP
TYREIADLPLPERVARLRDPEFRARLLADAPQTDNPFAKSMLRNFGKIFQLTDPVNYEPGPEHTLAAMAEARGVSPEAVA
LDLMLERDGNGMLYLPFLNYAQGTLDPIMEMMQSPATLPGLSDGGAHVGMICDGSFTSTMLTHWVRDRTKGQKLSVESIV
HRQARKTAEWIGLWDRGLIAPGYRADLNVIDLANMKLHLPNVIRDLPAGGRRLMQRASGYTATILKGEITHRDGDPTGKL
PGNLVRGARQAPAQAMAAE

Sequences:

>Translated_579_residues
MATHDLIIRGGTIIDGSGGPSFEGDVAVSGGVITDVGKINGKGIEEIDARGQVVTPGFVDLHTHYDGQVAWGEAISPSSL
HGVTTVVMGNCGVGFAPCKTEDHDRLIRLMEGVEDIPFPVLSQGLPWAWESFPDYLDFLSTRRFDTDVCAQLPHAALRVF
VMGDRGANREDATPEDIAAMAKLAKEAVIAGAMGFTTSRTLNHRTSDGQPTPTLTASEAELTGIGMGLAEAGRGVLQFVS
DFDDPQKEAAMLRRIVEKTGRPLSVSLAQSDVAPNGWRHLLGAIEAAAADGIPIRAQVAPRPVGVLLGLDLTMNPFSAHP
TYREIADLPLPERVARLRDPEFRARLLADAPQTDNPFAKSMLRNFGKIFQLTDPVNYEPGPEHTLAAMAEARGVSPEAVA
LDLMLERDGNGMLYLPFLNYAQGTLDPIMEMMQSPATLPGLSDGGAHVGMICDGSFTSTMLTHWVRDRTKGQKLSVESIV
HRQARKTAEWIGLWDRGLIAPGYRADLNVIDLANMKLHLPNVIRDLPAGGRRLMQRASGYTATILKGEITHRDGDPTGKL
PGNLVRGARQAPAQAMAAE
>Mature_578_residues
ATHDLIIRGGTIIDGSGGPSFEGDVAVSGGVITDVGKINGKGIEEIDARGQVVTPGFVDLHTHYDGQVAWGEAISPSSLH
GVTTVVMGNCGVGFAPCKTEDHDRLIRLMEGVEDIPFPVLSQGLPWAWESFPDYLDFLSTRRFDTDVCAQLPHAALRVFV
MGDRGANREDATPEDIAAMAKLAKEAVIAGAMGFTTSRTLNHRTSDGQPTPTLTASEAELTGIGMGLAEAGRGVLQFVSD
FDDPQKEAAMLRRIVEKTGRPLSVSLAQSDVAPNGWRHLLGAIEAAAADGIPIRAQVAPRPVGVLLGLDLTMNPFSAHPT
YREIADLPLPERVARLRDPEFRARLLADAPQTDNPFAKSMLRNFGKIFQLTDPVNYEPGPEHTLAAMAEARGVSPEAVAL
DLMLERDGNGMLYLPFLNYAQGTLDPIMEMMQSPATLPGLSDGGAHVGMICDGSFTSTMLTHWVRDRTKGQKLSVESIVH
RQARKTAEWIGLWDRGLIAPGYRADLNVIDLANMKLHLPNVIRDLPAGGRRLMQRASGYTATILKGEITHRDGDPTGKLP
GNLVRGARQAPAQAMAAE

Specific function: Involved In The Anaerobic Utilization Of Allantoin. [C]

COG id: COG3653

COG function: function code Q; N-acyl-D-aspartate/D-glutamate deacylase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the N-acyl-D-amino-acid deacylase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013108
- InterPro:   IPR011059 [H]

Pfam domain/function: PF07969 Amidohydro_3 [H]

EC number: 3.5.2.5 [C]

Molecular weight: Translated: 62232; Mature: 62101

Theoretical pI: Translated: 5.47; Mature: 5.47

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MATHDLIIRGGTIIDGSGGPSFEGDVAVSGGVITDVGKINGKGIEEIDARGQVVTPGFVD
CCCCCEEEECCEEEECCCCCCCCCCEEECCCEEEECCCCCCCCCHHHCCCCCEECCCEEE
LHTHYDGQVAWGEAISPSSLHGVTTVVMGNCGVGFAPCKTEDHDRLIRLMEGVEDIPFPV
EEECCCCEEEECCCCCCCCCCCEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHCCCCHH
LSQGLPWAWESFPDYLDFLSTRRFDTDVCAQLPHAALRVFVMGDRGANREDATPEDIAAM
HHCCCCCHHHHHHHHHHHHHHCCCCHHHHHHCCCCCEEEEEECCCCCCCCCCCHHHHHHH
AKLAKEAVIAGAMGFTTSRTLNHRTSDGQPTPTLTASEAELTGIGMGLAEAGRGVLQFVS
HHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEECCCCHHHCCCCCHHHHHHHHHHHHH
DFDDPQKEAAMLRRIVEKTGRPLSVSLAQSDVAPNGWRHLLGAIEAAAADGIPIRAQVAP
CCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCHHHHHHHHHHHHHCCCCCEEEEECC
RPVGVLLGLDLTMNPFSAHPTYREIADLPLPERVARLRDPEFRARLLADAPQTDNPFAKS
CCEEEEEECCEECCCCCCCCCHHHHHCCCCHHHHHHCCCHHHHHHHHHCCCCCCCHHHHH
MLRNFGKIFQLTDPVNYEPGPEHTLAAMAEARGVSPEAVALDLMLERDGNGMLYLPFLNY
HHHHHHHEEEECCCCCCCCCCCHHHHHHHHHCCCCCCCEEEEEEEEECCCCEEEECCCCC
AQGTLDPIMEMMQSPATLPGLSDGGAHVGMICDGSFTSTMLTHWVRDRTKGQKLSVESIV
CCCCHHHHHHHHHCCCCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHCCCCEECHHHHH
HRQARKTAEWIGLWDRGLIAPGYRADLNVIDLANMKLHLPNVIRDLPAGGRRLMQRASGY
HHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEECCCEECCCHHHHHCCCCHHHHHHHHCCC
TATILKGEITHRDGDPTGKLPGNLVRGARQAPAQAMAAE
EEEEEECEEECCCCCCCCCCCHHHHHHHHHCCCHHHCCC
>Mature Secondary Structure 
ATHDLIIRGGTIIDGSGGPSFEGDVAVSGGVITDVGKINGKGIEEIDARGQVVTPGFVD
CCCCEEEECCEEEECCCCCCCCCCEEECCCEEEECCCCCCCCCHHHCCCCCEECCCEEE
LHTHYDGQVAWGEAISPSSLHGVTTVVMGNCGVGFAPCKTEDHDRLIRLMEGVEDIPFPV
EEECCCCEEEECCCCCCCCCCCEEEEEEECCCCCCCCCCCCCHHHHHHHHHHHHCCCCHH
LSQGLPWAWESFPDYLDFLSTRRFDTDVCAQLPHAALRVFVMGDRGANREDATPEDIAAM
HHCCCCCHHHHHHHHHHHHHHCCCCHHHHHHCCCCCEEEEEECCCCCCCCCCCHHHHHHH
AKLAKEAVIAGAMGFTTSRTLNHRTSDGQPTPTLTASEAELTGIGMGLAEAGRGVLQFVS
HHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCEECCCCHHHCCCCCHHHHHHHHHHHHH
DFDDPQKEAAMLRRIVEKTGRPLSVSLAQSDVAPNGWRHLLGAIEAAAADGIPIRAQVAP
CCCCHHHHHHHHHHHHHHCCCCEEEEECCCCCCCCHHHHHHHHHHHHHCCCCCEEEEECC
RPVGVLLGLDLTMNPFSAHPTYREIADLPLPERVARLRDPEFRARLLADAPQTDNPFAKS
CCEEEEEECCEECCCCCCCCCHHHHHCCCCHHHHHHCCCHHHHHHHHHCCCCCCCHHHHH
MLRNFGKIFQLTDPVNYEPGPEHTLAAMAEARGVSPEAVALDLMLERDGNGMLYLPFLNY
HHHHHHHEEEECCCCCCCCCCCHHHHHHHHHCCCCCCCEEEEEEEEECCCCEEEECCCCC
AQGTLDPIMEMMQSPATLPGLSDGGAHVGMICDGSFTSTMLTHWVRDRTKGQKLSVESIV
CCCCHHHHHHHHHCCCCCCCCCCCCCEEEEEECCCHHHHHHHHHHHHHCCCCEECHHHHH
HRQARKTAEWIGLWDRGLIAPGYRADLNVIDLANMKLHLPNVIRDLPAGGRRLMQRASGY
HHHHHHHHHHHHHHCCCCCCCCCCCCCCEEEECCCEECCCHHHHHCCCCHHHHHHHHCCC
TATILKGEITHRDGDPTGKLPGNLVRGARQAPAQAMAAE
EEEEEECEEECCCCCCCCCCCHHHHHHHHHCCCHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: Allantoin; H2O [C]

Specific reaction: Allantoin + H2O --> Allantoate + H+ [C]

General reaction: Carboxylic acid amide hydrolysis [C]

Inhibitor: Dithiothreitol; p-Chloromercuribenzene-sulphonic acid [C]

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]