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The map label for this gene is 114798780

Identifier: 114798780

GI number: 114798780

Start: 3266720

End: 3268330

Strand: Direct

Name: 114798780

Synonym: HNE_3090

Alternate gene names: NA

Gene position: 3266720-3268330 (Clockwise)

Preceding gene: 114799388

Following gene: 114799516

Centisome position: 88.17

GC content: 52.14

Gene sequence:

>1611_bases
ATGAAAGTCAGCCAACTCAAACCACACCTGCGTGTGGCCGCCTCCGCCCTTGCCATCGCTACCCTGGTTGCCTGTGGGGG
CGGTGGTGGGAGCAGCAGCACGCCAAGCGGCGGCAACTCTGTATCTCCTCCGCCTCCTCCGCCTCCCCCACCGGCCAATG
AGGCCCCTGTCGCCCGCACCACTGCCAGCCCTGCCTCGCCCGAGGAAGGCCAGCCCTTCACGCTAGATGCCTCCACCTCC
ACGGATGCAGACGGCGACACGCTTACATATTCGTGGAGTCAACTATCGGGACCGCCCGTCACACTCGAGACACCCGATCA
GGCAGTGCTCCAAGTCGCCGCCGCCGAAGTCATCGAGGACACCGAAGCAGTATTTCGGGTTACAGTATCTGACGGAGAAA
ATTCGTCCACAGCAGACGTTCCGCTGGTCTTCGAGAACATCTCACAAACACCAGCCTTAATAACACCGTATACGTACTAT
TCGACCATCCCACTTCCATTTAGACCCATAAACTGGGGTACAGTCCACCCCGGTTTGCAAATCCTGGGTGCAGAAGAAAT
ACCGGGTGGGGATATCTCGTTCTATGGTGTCTACCGAGATTCCCAAAGCACAGAGTTTGCGCTATCTTTCAGAAGAGCAA
TCAGCCAAGCATTTCAACAGCCTTTGTTCACTAAACTAGTTACGTACTTCACGCTTTCGTCAGGATCTCATTTCTGGGTG
ATCGATAGTCAAGGATCACGCATATACAGCCAGCCGCCAGATAACTCGGACGAACTTACACTGCTGCAAGAGACCTCTCA
TCAGGACGCTTGCTCCACAACACAACTGGTCTCTGAACAGTGGCTGATAGTAGGCCGCAGAAATGCTGGCTTTGAACTTT
ATGAAAATGGTTGGGGCGTCGATACATCCACCCAATATCCTCCGCCGCCTCCGGCGCACAATCCCGTCCGACAGAAAGGC
TTCACCACCACCAACTCAATTTGCGGCATTCAAAGAACATATTTCTCTGTAGACAGAACAGTCTTTGGTTCGCCTTACGG
CTTGTTGGATTTAATCAGTCTTCTGACTTACAATCTCGACACACGATCTTTGGAGCTTTACTCGCAAAAACCAGGGGCAA
TGACTCAGGAGGTTGACGCGTTCGAACTTACGCAAAGCGTGAGAGCTGAATTCGACAGTGTAAATGATCTAGAGTTGATA
GATCACATGACAGCAGAAAACACACTTTGGCTGTTGTTTAGTGACGGAGAGCACAAAGGTGACCACAGGCTCATTGTGGC
AGGGTTGGATGATAACAGAAATATCGTTCAGTCCACCTACCAATGGGAAATCGGTGCACCAAGCGGCTTTGGCAAATACT
CTTTTCTAACCGCGAACCCAGCTGGAATCGAGATTGTGATATTTGCGCCCTCTTCTCCTCAAGCAATAGTATTCAAGCCG
AATGATCCATTTGACTGGTTCGGTAGTCTTGATGGTCCCTACTTTTTCGAAGTTGGCTTGGGCGCGACCACGGGCGGAAA
CCTCGGGATCAGCGTCGACAACAATCAGGCGATTGTCACGCTCCACCCAGACAAACAAGAACTGAAAGTGTTTGTCAGTC
CGCCCTACTGA

Upstream 100 bases:

>100_bases
TCCAAACCGCGCACAAGCCTTTAAAAATATTAGAAATTCCACCTTGCAGTGGAGAATATTTTTGGTACGCAGAAGGTAAC
TTTAGATTACCGAGGGGTCC

Downstream 100 bases:

>100_bases
CGCCCTAAAGCGCCAGCTCCAGCTTCCCGTTACAGAGGTTGGAATAGTCGTTCACCAGCGCTTCGGAGATCTGGCCAGGC
TTGTAGCGATGCTCGCCGAT

Product: putative lipoprotein

Products: beta-D-Gal-(1->3)-D-GlcNAc; beta-D-Gal-(1->4)-D-Glc; lacto-N-biose; lactose

Alternate protein names: NA

Number of amino acids: Translated: 536; Mature: 536

Protein sequence:

>536_residues
MKVSQLKPHLRVAASALAIATLVACGGGGGSSSTPSGGNSVSPPPPPPPPPANEAPVARTTASPASPEEGQPFTLDASTS
TDADGDTLTYSWSQLSGPPVTLETPDQAVLQVAAAEVIEDTEAVFRVTVSDGENSSTADVPLVFENISQTPALITPYTYY
STIPLPFRPINWGTVHPGLQILGAEEIPGGDISFYGVYRDSQSTEFALSFRRAISQAFQQPLFTKLVTYFTLSSGSHFWV
IDSQGSRIYSQPPDNSDELTLLQETSHQDACSTTQLVSEQWLIVGRRNAGFELYENGWGVDTSTQYPPPPPAHNPVRQKG
FTTTNSICGIQRTYFSVDRTVFGSPYGLLDLISLLTYNLDTRSLELYSQKPGAMTQEVDAFELTQSVRAEFDSVNDLELI
DHMTAENTLWLLFSDGEHKGDHRLIVAGLDDNRNIVQSTYQWEIGAPSGFGKYSFLTANPAGIEIVIFAPSSPQAIVFKP
NDPFDWFGSLDGPYFFEVGLGATTGGNLGISVDNNQAIVTLHPDKQELKVFVSPPY

Sequences:

>Translated_536_residues
MKVSQLKPHLRVAASALAIATLVACGGGGGSSSTPSGGNSVSPPPPPPPPPANEAPVARTTASPASPEEGQPFTLDASTS
TDADGDTLTYSWSQLSGPPVTLETPDQAVLQVAAAEVIEDTEAVFRVTVSDGENSSTADVPLVFENISQTPALITPYTYY
STIPLPFRPINWGTVHPGLQILGAEEIPGGDISFYGVYRDSQSTEFALSFRRAISQAFQQPLFTKLVTYFTLSSGSHFWV
IDSQGSRIYSQPPDNSDELTLLQETSHQDACSTTQLVSEQWLIVGRRNAGFELYENGWGVDTSTQYPPPPPAHNPVRQKG
FTTTNSICGIQRTYFSVDRTVFGSPYGLLDLISLLTYNLDTRSLELYSQKPGAMTQEVDAFELTQSVRAEFDSVNDLELI
DHMTAENTLWLLFSDGEHKGDHRLIVAGLDDNRNIVQSTYQWEIGAPSGFGKYSFLTANPAGIEIVIFAPSSPQAIVFKP
NDPFDWFGSLDGPYFFEVGLGATTGGNLGISVDNNQAIVTLHPDKQELKVFVSPPY
>Mature_536_residues
MKVSQLKPHLRVAASALAIATLVACGGGGGSSSTPSGGNSVSPPPPPPPPPANEAPVARTTASPASPEEGQPFTLDASTS
TDADGDTLTYSWSQLSGPPVTLETPDQAVLQVAAAEVIEDTEAVFRVTVSDGENSSTADVPLVFENISQTPALITPYTYY
STIPLPFRPINWGTVHPGLQILGAEEIPGGDISFYGVYRDSQSTEFALSFRRAISQAFQQPLFTKLVTYFTLSSGSHFWV
IDSQGSRIYSQPPDNSDELTLLQETSHQDACSTTQLVSEQWLIVGRRNAGFELYENGWGVDTSTQYPPPPPAHNPVRQKG
FTTTNSICGIQRTYFSVDRTVFGSPYGLLDLISLLTYNLDTRSLELYSQKPGAMTQEVDAFELTQSVRAEFDSVNDLELI
DHMTAENTLWLLFSDGEHKGDHRLIVAGLDDNRNIVQSTYQWEIGAPSGFGKYSFLTANPAGIEIVIFAPSSPQAIVFKP
NDPFDWFGSLDGPYFFEVGLGATTGGNLGISVDNNQAIVTLHPDKQELKVFVSPPY

Specific function: Unknown

COG id: COG3979

COG function: function code R; Uncharacterized protein contain chitin-binding domain type 3

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 3.2.1.14

Molecular weight: Translated: 57960; Mature: 57960

Theoretical pI: Translated: 4.20; Mature: 4.20

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
1.1 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
1.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKVSQLKPHLRVAASALAIATLVACGGGGGSSSTPSGGNSVSPPPPPPPPPANEAPVART
CCCHHCCHHHHHHHHHHHHHHHHEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEC
TASPASPEEGQPFTLDASTSTDADGDTLTYSWSQLSGPPVTLETPDQAVLQVAAAEVIED
CCCCCCCCCCCCEEEECCCCCCCCCCEEEEEHHHCCCCCEEEECCHHHHHHHHHHHHHHC
TEAVFRVTVSDGENSSTADVPLVFENISQTPALITPYTYYSTIPLPFRPINWGTVHPGLQ
CCEEEEEEECCCCCCCCCCCEEEEECCCCCCEEEECCHHEEECCCCCCCCCCCCCCCCEE
ILGAEEIPGGDISFYGVYRDSQSTEFALSFRRAISQAFQQPLFTKLVTYFTLSSGSHFWV
EEECCCCCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCEEEE
IDSQGSRIYSQPPDNSDELTLLQETSHQDACSTTQLVSEQWLIVGRRNAGFELYENGWGV
EECCCCEEECCCCCCCCCEEEEECCCCCCHHHHHHHHCCCEEEEECCCCCCEEEECCCCC
DTSTQYPPPPPAHNPVRQKGFTTTNSICGIQRTYFSVDRTVFGSPYGLLDLISLLTYNLD
CCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCHHHEEECCEECCCCCCHHHHHHHHHCCCC
TRSLELYSQKPGAMTQEVDAFELTQSVRAEFDSVNDLELIDHMTAENTLWLLFSDGEHKG
CCEEEEECCCCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHCCCCCEEEEEEECCCCCC
DHRLIVAGLDDNRNIVQSTYQWEIGAPSGFGKYSFLTANPAGIEIVIFAPSSPQAIVFKP
CCEEEEEECCCCCCEEEEEEEEEECCCCCCCCEEEEEECCCCEEEEEECCCCCCEEEECC
NDPFDWFGSLDGPYFFEVGLGATTGGNLGISVDNNQAIVTLHPDKQELKVFVSPPY
CCCHHHHCCCCCCEEEEEECCCCCCCCEEEEECCCEEEEEECCCCHHEEEEECCCC
>Mature Secondary Structure
MKVSQLKPHLRVAASALAIATLVACGGGGGSSSTPSGGNSVSPPPPPPPPPANEAPVART
CCCHHCCHHHHHHHHHHHHHHHHEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEC
TASPASPEEGQPFTLDASTSTDADGDTLTYSWSQLSGPPVTLETPDQAVLQVAAAEVIED
CCCCCCCCCCCCEEEECCCCCCCCCCEEEEEHHHCCCCCEEEECCHHHHHHHHHHHHHHC
TEAVFRVTVSDGENSSTADVPLVFENISQTPALITPYTYYSTIPLPFRPINWGTVHPGLQ
CCEEEEEEECCCCCCCCCCCEEEEECCCCCCEEEECCHHEEECCCCCCCCCCCCCCCCEE
ILGAEEIPGGDISFYGVYRDSQSTEFALSFRRAISQAFQQPLFTKLVTYFTLSSGSHFWV
EEECCCCCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCEEEE
IDSQGSRIYSQPPDNSDELTLLQETSHQDACSTTQLVSEQWLIVGRRNAGFELYENGWGV
EECCCCEEECCCCCCCCCEEEEECCCCCCHHHHHHHHCCCEEEEECCCCCCEEEECCCCC
DTSTQYPPPPPAHNPVRQKGFTTTNSICGIQRTYFSVDRTVFGSPYGLLDLISLLTYNLD
CCCCCCCCCCCCCCCHHHCCCCCCCCCCCCCHHHEEECCEECCCCCCHHHHHHHHHCCCC
TRSLELYSQKPGAMTQEVDAFELTQSVRAEFDSVNDLELIDHMTAENTLWLLFSDGEHKG
CCEEEEECCCCCCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHCCCCCEEEEEEECCCCCC
DHRLIVAGLDDNRNIVQSTYQWEIGAPSGFGKYSFLTANPAGIEIVIFAPSSPQAIVFKP
CCEEEEEECCCCCCEEEEEEEEEECCCCCCCCEEEEEECCCCEEEEEECCCCCCEEEECC
NDPFDWFGSLDGPYFFEVGLGATTGGNLGISVDNNQAIVTLHPDKQELKVFVSPPY
CCCHHHHCCCCCCEEEEEECCCCCCCCEEEEECCCEEEEEECCCCHHEEEEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: beta-D-Gal-(1->3)-beta-D-GlcNAc-(1->3)-beta-D-Gal-(1->4)-D-Glc; H2O; lacto-N-tetraose

Specific reaction: (1) beta-D-Gal-(1->3)-beta-D-GlcNAc-(1->3)-beta-D-Gal-(1->4)-D-Glc + H2O = beta-D-Gal-(1->3)-D-GlcNAc + beta-D-Gal-(1->4)-D-Glc; (2) lacto-N-tetraose + H2O = lacto-N-biose + lactose

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA