Click here to switch to the map view.

The map label for this gene is yceI [H]

Identifier: 114798699

GI number: 114798699

Start: 1905176

End: 1905916

Strand: Direct

Name: yceI [H]

Synonym: HNE_1846

Alternate gene names: 114798699

Gene position: 1905176-1905916 (Clockwise)

Preceding gene: 114797573

Following gene: 114799485

Centisome position: 51.42

GC content: 61.67

Gene sequence:

>741_bases
ATGCGACTTCTTCTTATTTCGGCCAGCGCACTGATTCTTGCGGCCTGTTCTGAAACAACACCGGCGGCGCCCGCCGCCGA
GACTCCCGCCCCCGAAGCGACCGCTTCAACAGAAGCAGCCCCTGAAACCACCGAAGCTCCGGTGGAATATGGCGCGGCCG
GCACCTACGAGATTGATCCGGCCCACACATCGGTCACCTGGAAAGTCGATCACTTCGGCCTCTCCAGCTACACGGGCCGC
TTCAAGACGGTTGACGCGACACTCCAGTTCAACCCGGAAGACCCTTCCGCCACCAGCATCACCGCCACCATCGACCCGCT
CTCGGTCGAGACAGATTTCCCCGGCGACTATAAAGCCGGCCATGCGGACAGCGGCTTTGACTCGTGGAACGAAGACCTCG
GCCGCAACGCCAACTGGCTGAACGCTGACGCCTTCCCGCAAATCACCTTCACCAGCACCTCGGTGACCCAGGACACCCCG
TCGACCGGCAAAGTCACCGGCGACCTGACCTTCCTCGGCGTGACCAAGCCGGTGACCCTCGACGTAACGTATAACGGCAA
GGCAAACTTCCCCTGGGCGCCTGAGGCTGACAAGATCGGCTTCTCCGCCACCACAACTCTGAAGCGTTCGGACTTCGGCA
ACGCCACCTACGCGCCAAACATCGGCGACGAAGTGGAAGTGATCATCGAAACCGAGTTCCAACAGGTCGTTGCTCCGGCA
GAACCGGCCCCGGCAGAGTAA

Upstream 100 bases:

>100_bases
AATAAATGATATGTCGCGTAGATGTTAAAGTTGAGGTTCACACTGTAAATGAGTGCACTACTTAGAGTGTTCCCATACGG
CAACTGGAGGGACTGATTCC

Downstream 100 bases:

>100_bases
GCCAGTATGACAACTTCCTCACCGGCGTCTCGCTATACCGCTGTGGCCATTGCCCTTCATTGGGCCATGGCCATCCTTCT
CCTCTTCATGATCTGGCTTG

Product: YceI-like family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 246; Mature: 246

Protein sequence:

>246_residues
MRLLLISASALILAACSETTPAAPAAETPAPEATASTEAAPETTEAPVEYGAAGTYEIDPAHTSVTWKVDHFGLSSYTGR
FKTVDATLQFNPEDPSATSITATIDPLSVETDFPGDYKAGHADSGFDSWNEDLGRNANWLNADAFPQITFTSTSVTQDTP
STGKVTGDLTFLGVTKPVTLDVTYNGKANFPWAPEADKIGFSATTTLKRSDFGNATYAPNIGDEVEVIIETEFQQVVAPA
EPAPAE

Sequences:

>Translated_246_residues
MRLLLISASALILAACSETTPAAPAAETPAPEATASTEAAPETTEAPVEYGAAGTYEIDPAHTSVTWKVDHFGLSSYTGR
FKTVDATLQFNPEDPSATSITATIDPLSVETDFPGDYKAGHADSGFDSWNEDLGRNANWLNADAFPQITFTSTSVTQDTP
STGKVTGDLTFLGVTKPVTLDVTYNGKANFPWAPEADKIGFSATTTLKRSDFGNATYAPNIGDEVEVIIETEFQQVVAPA
EPAPAE
>Mature_246_residues
MRLLLISASALILAACSETTPAAPAAETPAPEATASTEAAPETTEAPVEYGAAGTYEIDPAHTSVTWKVDHFGLSSYTGR
FKTVDATLQFNPEDPSATSITATIDPLSVETDFPGDYKAGHADSGFDSWNEDLGRNANWLNADAFPQITFTSTSVTQDTP
STGKVTGDLTFLGVTKPVTLDVTYNGKANFPWAPEADKIGFSATTTLKRSDFGNATYAPNIGDEVEVIIETEFQQVVAPA
EPAPAE

Specific function: Unknown

COG id: COG2353

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Periplasm (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the UPF0312 family. Type 1 subfamily [H]

Homologues:

Organism=Escherichia coli, GI1787295, Length=183, Percent_Identity=36.6120218579235, Blast_Score=99, Evalue=3e-22,

Paralogues:

None

Copy number: 40 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007372 [H]

Pfam domain/function: PF04264 YceI [H]

EC number: NA

Molecular weight: Translated: 25958; Mature: 25958

Theoretical pI: Translated: 3.89; Mature: 3.89

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.4 %Cys     (Translated Protein)
0.4 %Met     (Translated Protein)
0.8 %Cys+Met (Translated Protein)
0.4 %Cys     (Mature Protein)
0.4 %Met     (Mature Protein)
0.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRLLLISASALILAACSETTPAAPAAETPAPEATASTEAAPETTEAPVEYGAAGTYEIDP
CEEEEEECCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCEEEECC
AHTSVTWKVDHFGLSSYTGRFKTVDATLQFNPEDPSATSITATIDPLSVETDFPGDYKAG
CCCEEEEEEECCCCCCCCCCEEEEEEEEEECCCCCCCEEEEEEECCEEEECCCCCCCCCC
HADSGFDSWNEDLGRNANWLNADAFPQITFTSTSVTQDTPSTGKVTGDLTFLGVTKPVTL
CCCCCCCHHHHHHCCCCCEECCCCCCEEEEECCCCCCCCCCCCEEEEEEEEEEECCCEEE
DVTYNGKANFPWAPEADKIGFSATTTLKRSDFGNATYAPNIGDEVEVIIETEFQQVVAPA
EEEECCCCCCCCCCCCCCCCCEEEEEEECCCCCCCEECCCCCCCEEEEEEECHHHHHCCC
EPAPAE
CCCCCC
>Mature Secondary Structure
MRLLLISASALILAACSETTPAAPAAETPAPEATASTEAAPETTEAPVEYGAAGTYEIDP
CEEEEEECCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCEEEECC
AHTSVTWKVDHFGLSSYTGRFKTVDATLQFNPEDPSATSITATIDPLSVETDFPGDYKAG
CCCEEEEEEECCCCCCCCCCEEEEEEEEEECCCCCCCEEEEEEECCEEEECCCCCCCCCC
HADSGFDSWNEDLGRNANWLNADAFPQITFTSTSVTQDTPSTGKVTGDLTFLGVTKPVTL
CCCCCCCHHHHHHCCCCCEECCCCCCEEEEECCCCCCCCCCCCEEEEEEEEEEECCCEEE
DVTYNGKANFPWAPEADKIGFSATTTLKRSDFGNATYAPNIGDEVEVIIETEFQQVVAPA
EEEECCCCCCCCCCCCCCCCCEEEEEEECCCCCCCEECCCCCCCEEEEEEECHHHHHCCC
EPAPAE
CCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA