| Definition | Hyphomonas neptunium ATCC 15444 chromosome, complete genome. |
|---|---|
| Accession | NC_008358 |
| Length | 3,705,021 |
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The map label for this gene is steT [H]
Identifier: 114798685
GI number: 114798685
Start: 1374767
End: 1376086
Strand: Direct
Name: steT [H]
Synonym: HNE_1338
Alternate gene names: 114798685
Gene position: 1374767-1376086 (Clockwise)
Preceding gene: 114799350
Following gene: 114797504
Centisome position: 37.11
GC content: 66.82
Gene sequence:
>1320_bases GTGACCGAACCTTCCGCCTATCCCGTCCGTAGCCTGACGACGCGCTATGTTGTGGTGGTGACGATTGCGATGGTGATCGG GGCGGGGATATTCAAATCTCCGGCGCTGGTGGCGGCCAATGCAGGGTCGGAGACGGCGGTGTATCTGCTGTGGCTGGCGG GCGGATTTATCTCGCTGATGGGGGCGCTGTGCTATTCAGAGCTGGCGGCGGCGTTTCCCCATGCGGGCGGGGATTATCAT TTCCTGGAGCGGGCCTGGGGGCGGCGCTTTGCGTTTCTGTTTGCGTGGGCGCGCTTTGCGGTGATCAATACCGGCGCGAT TGCGCTGCTCGGCTTTGTCATCGGCGATTATATGAACCGCGTGATCGATCTGGGGGCGCATGGCCCGGCGATCTATGCCT TTGCCAGCGTGCTGGGGCTGAGCGCGCTGAAGCTGCGGCCGACGGGCGAGGCGGGCGATAGCGGGCTGGTGATCATTCTT GTGGTGGGGCTGCTGGTGCTGGTGGCGGCGGGGGCGAAGATTGCGCTGTCGGGCACGCCGCCGCTCGCGCCGGGCGCGCC CTACATGCCGGGCTTTGGCGGCATCGGCTACGGCCTCGTCTTTGTGTTGCTGGCCTTTGGCGGGTGGACGGAATCGGCGA CGCTTTCCTCTGAAGTGAAGGATGGCGAGCGGGGCATGGTGCGCGCGCTCGTCATCGCGATTTCGCTCATCACGGGGCTT TACCTGCTGACGGCCTGGGCGATGCTGCGCGGGCTGGGGCTCGATGGCCTGGCGGGGGCGGATGCGCCGGCGGCGGATCT GATGGCGCTGGCGTTTGGGGAAAGCGCCGGTGTGGTGCTGGCCCTCGCGGTGGTCGCGGCGGCGGTGACCTCTGTGAACG CCACGATCATCGTGGGGGCGCGCACCACCTATGCGGCGGCCGCGCGCCTGCCGGCCCTGTCGTGGCTTGGCCGCTGGAAC GAAACCACGCGCAGCCCGCGCAACGCCATTCTGGCGCAGGGGGCGATCTCGCTGGCGCTGGTTGGATTTGGCGCGGCGTA TCGCGGGTTTGAAACGCTGGTGGATTATACGGCGCCGGTTTACTGGGTGTTCCTGATTGCCAGTGGGATGGCGCTGATCC GCTTGCGGATGAAGGAGCCTGCGGCGGCGCGACCTTTCCGTGTGCCGCTTTATCCGCTGGTTCCGGCGCTGTTCATTCTC TCGAGCGGCGCGATGCTGGTTTCGGCCATTCTTTATGTGCAGGGCGGGGCGTTCTTCGGGCTCGGCGTGCTGGTGGCGGG GCTGGCGCTGCTGCCGGTTCTGGGGCGCAGCGGCAGATAA
Upstream 100 bases:
>100_bases GGAGGGCGGGCCGTCTGGTCCGCCCTTTTTCTTTGCGCCGATGTCGCCGGGGGCAATCTTCGTGTAAGCGGGAAGGCGAA TTGACCGGGGCGCCCAGATT
Downstream 100 bases:
>100_bases TCCGGAACCCTGCGCTGGCCCCCGCGTTGGTTTTGCAAGTGACCGCCACAAAGGCGGCATGATGCCAAATCGGGAGGCCC TCCATGAGCAACTCCAAGAA
Product: amino acid permease family protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 439; Mature: 438
Protein sequence:
>439_residues MTEPSAYPVRSLTTRYVVVVTIAMVIGAGIFKSPALVAANAGSETAVYLLWLAGGFISLMGALCYSELAAAFPHAGGDYH FLERAWGRRFAFLFAWARFAVINTGAIALLGFVIGDYMNRVIDLGAHGPAIYAFASVLGLSALKLRPTGEAGDSGLVIIL VVGLLVLVAAGAKIALSGTPPLAPGAPYMPGFGGIGYGLVFVLLAFGGWTESATLSSEVKDGERGMVRALVIAISLITGL YLLTAWAMLRGLGLDGLAGADAPAADLMALAFGESAGVVLALAVVAAAVTSVNATIIVGARTTYAAAARLPALSWLGRWN ETTRSPRNAILAQGAISLALVGFGAAYRGFETLVDYTAPVYWVFLIASGMALIRLRMKEPAAARPFRVPLYPLVPALFIL SSGAMLVSAILYVQGGAFFGLGVLVAGLALLPVLGRSGR
Sequences:
>Translated_439_residues MTEPSAYPVRSLTTRYVVVVTIAMVIGAGIFKSPALVAANAGSETAVYLLWLAGGFISLMGALCYSELAAAFPHAGGDYH FLERAWGRRFAFLFAWARFAVINTGAIALLGFVIGDYMNRVIDLGAHGPAIYAFASVLGLSALKLRPTGEAGDSGLVIIL VVGLLVLVAAGAKIALSGTPPLAPGAPYMPGFGGIGYGLVFVLLAFGGWTESATLSSEVKDGERGMVRALVIAISLITGL YLLTAWAMLRGLGLDGLAGADAPAADLMALAFGESAGVVLALAVVAAAVTSVNATIIVGARTTYAAAARLPALSWLGRWN ETTRSPRNAILAQGAISLALVGFGAAYRGFETLVDYTAPVYWVFLIASGMALIRLRMKEPAAARPFRVPLYPLVPALFIL SSGAMLVSAILYVQGGAFFGLGVLVAGLALLPVLGRSGR >Mature_438_residues TEPSAYPVRSLTTRYVVVVTIAMVIGAGIFKSPALVAANAGSETAVYLLWLAGGFISLMGALCYSELAAAFPHAGGDYHF LERAWGRRFAFLFAWARFAVINTGAIALLGFVIGDYMNRVIDLGAHGPAIYAFASVLGLSALKLRPTGEAGDSGLVIILV VGLLVLVAAGAKIALSGTPPLAPGAPYMPGFGGIGYGLVFVLLAFGGWTESATLSSEVKDGERGMVRALVIAISLITGLY LLTAWAMLRGLGLDGLAGADAPAADLMALAFGESAGVVLALAVVAAAVTSVNATIIVGARTTYAAAARLPALSWLGRWNE TTRSPRNAILAQGAISLALVGFGAAYRGFETLVDYTAPVYWVFLIASGMALIRLRMKEPAAARPFRVPLYPLVPALFILS SGAMLVSAILYVQGGAFFGLGVLVAGLALLPVLGRSGR
Specific function: Exhibits an obligate exchange activity for serine, threonine and aromatic amino acids [H]
COG id: COG0531
COG function: function code E; Amino acid transporters
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the amino acid-polyamine-organocation (APC) superfamily. L-type amino acid transporter (LAT) (TC 2.A.3.8) family [H]
Homologues:
Organism=Homo sapiens, GI187423910, Length=414, Percent_Identity=24.8792270531401, Blast_Score=110, Evalue=3e-24, Organism=Homo sapiens, GI7657591, Length=414, Percent_Identity=24.8792270531401, Blast_Score=110, Evalue=3e-24, Organism=Homo sapiens, GI115648063, Length=427, Percent_Identity=22.9508196721311, Blast_Score=100, Evalue=4e-21, Organism=Homo sapiens, GI115648022, Length=427, Percent_Identity=22.9508196721311, Blast_Score=100, Evalue=4e-21, Organism=Homo sapiens, GI33286428, Length=398, Percent_Identity=25.1256281407035, Blast_Score=99, Evalue=6e-21, Organism=Homo sapiens, GI186910308, Length=430, Percent_Identity=23.953488372093, Blast_Score=99, Evalue=7e-21, Organism=Homo sapiens, GI186910306, Length=430, Percent_Identity=23.953488372093, Blast_Score=99, Evalue=7e-21, Organism=Homo sapiens, GI186910304, Length=430, Percent_Identity=23.953488372093, Blast_Score=99, Evalue=7e-21, Organism=Homo sapiens, GI71979932, Length=405, Percent_Identity=22.7160493827161, Blast_Score=94, Evalue=3e-19, Organism=Homo sapiens, GI7657683, Length=384, Percent_Identity=23.1770833333333, Blast_Score=86, Evalue=8e-17, Organism=Homo sapiens, GI9790235, Length=348, Percent_Identity=21.8390804597701, Blast_Score=72, Evalue=8e-13, Organism=Escherichia coli, GI87082250, Length=342, Percent_Identity=24.2690058479532, Blast_Score=75, Evalue=9e-15, Organism=Caenorhabditis elegans, GI17540018, Length=440, Percent_Identity=26.5909090909091, Blast_Score=115, Evalue=4e-26, Organism=Caenorhabditis elegans, GI32566699, Length=379, Percent_Identity=25.3298153034301, Blast_Score=102, Evalue=3e-22, Organism=Caenorhabditis elegans, GI71982612, Length=443, Percent_Identity=27.313769751693, Blast_Score=99, Evalue=4e-21, Organism=Caenorhabditis elegans, GI71982608, Length=443, Percent_Identity=27.313769751693, Blast_Score=99, Evalue=4e-21, Organism=Caenorhabditis elegans, GI71995388, Length=439, Percent_Identity=24.8291571753986, Blast_Score=96, Evalue=3e-20, Organism=Caenorhabditis elegans, GI71995382, Length=439, Percent_Identity=24.8291571753986, Blast_Score=96, Evalue=4e-20, Organism=Caenorhabditis elegans, GI17568033, Length=400, Percent_Identity=23, Blast_Score=93, Evalue=3e-19, Organism=Caenorhabditis elegans, GI71993915, Length=437, Percent_Identity=24.9427917620137, Blast_Score=87, Evalue=2e-17, Organism=Drosophila melanogaster, GI21357367, Length=435, Percent_Identity=24.367816091954, Blast_Score=112, Evalue=7e-25, Organism=Drosophila melanogaster, GI221331183, Length=404, Percent_Identity=27.4752475247525, Blast_Score=105, Evalue=5e-23, Organism=Drosophila melanogaster, GI17647653, Length=404, Percent_Identity=27.4752475247525, Blast_Score=105, Evalue=5e-23, Organism=Drosophila melanogaster, GI24664379, Length=404, Percent_Identity=27.4752475247525, Blast_Score=105, Evalue=5e-23, Organism=Drosophila melanogaster, GI45550968, Length=438, Percent_Identity=26.027397260274, Blast_Score=105, Evalue=5e-23, Organism=Drosophila melanogaster, GI19921172, Length=438, Percent_Identity=26.027397260274, Blast_Score=105, Evalue=5e-23, Organism=Drosophila melanogaster, GI24641993, Length=384, Percent_Identity=24.7395833333333, Blast_Score=102, Evalue=7e-22, Organism=Drosophila melanogaster, GI24641995, Length=384, Percent_Identity=24.7395833333333, Blast_Score=101, Evalue=9e-22, Organism=Drosophila melanogaster, GI24651635, Length=384, Percent_Identity=23.1770833333333, Blast_Score=94, Evalue=3e-19, Organism=Drosophila melanogaster, GI24651633, Length=384, Percent_Identity=23.1770833333333, Blast_Score=94, Evalue=3e-19,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004841 - InterPro: IPR002293 [H]
Pfam domain/function: PF00324 AA_permease [H]
EC number: NA
Molecular weight: Translated: 45385; Mature: 45254
Theoretical pI: Translated: 9.72; Mature: 9.72
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTEPSAYPVRSLTTRYVVVVTIAMVIGAGIFKSPALVAANAGSETAVYLLWLAGGFISLM CCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHCCCCEEEECCCCCHHHHHHHHHHHHHHHH GALCYSELAAAFPHAGGDYHFLERAWGRRFAFLFAWARFAVINTGAIALLGFVIGDYMNR HHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH VIDLGAHGPAIYAFASVLGLSALKLRPTGEAGDSGLVIILVVGLLVLVAAGAKIALSGTP HHHCCCCCHHHHHHHHHHCCHHEEECCCCCCCCCCHHHHHHHHHHHHHHCCCEEEECCCC PLAPGAPYMPGFGGIGYGLVFVLLAFGGWTESATLSSEVKDGERGMVRALVIAISLITGL CCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHH YLLTAWAMLRGLGLDGLAGADAPAADLMALAFGESAGVVLALAVVAAAVTSVNATIIVGA HHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCEEEEEEC RTTYAAAARLPALSWLGRWNETTRSPRNAILAQGAISLALVGFGAAYRGFETLVDYTAPV CHHHHHHHHHHHHHHHHCCCHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH YWVFLIASGMALIRLRMKEPAAARPFRVPLYPLVPALFILSSGAMLVSAILYVQGGAFFG HHHHHHHCCHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHCCCHHHH LGVLVAGLALLPVLGRSGR HHHHHHHHHHHHHHCCCCC >Mature Secondary Structure TEPSAYPVRSLTTRYVVVVTIAMVIGAGIFKSPALVAANAGSETAVYLLWLAGGFISLM CCCCCCCHHHHHHHHHHHHHHHHHHCCCHHCCCCEEEECCCCCHHHHHHHHHHHHHHHH GALCYSELAAAFPHAGGDYHFLERAWGRRFAFLFAWARFAVINTGAIALLGFVIGDYMNR HHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHH VIDLGAHGPAIYAFASVLGLSALKLRPTGEAGDSGLVIILVVGLLVLVAAGAKIALSGTP HHHCCCCCHHHHHHHHHHCCHHEEECCCCCCCCCCHHHHHHHHHHHHHHCCCEEEECCCC PLAPGAPYMPGFGGIGYGLVFVLLAFGGWTESATLSSEVKDGERGMVRALVIAISLITGL CCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHH YLLTAWAMLRGLGLDGLAGADAPAADLMALAFGESAGVVLALAVVAAAVTSVNATIIVGA HHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCEEEEEEC RTTYAAAARLPALSWLGRWNETTRSPRNAILAQGAISLALVGFGAAYRGFETLVDYTAPV CHHHHHHHHHHHHHHHHCCCHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH YWVFLIASGMALIRLRMKEPAAARPFRVPLYPLVPALFILSSGAMLVSAILYVQGGAFFG HHHHHHHCCHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHCCCHHHHHHHHHHCCCHHHH LGVLVAGLALLPVLGRSGR HHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]