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The map label for this gene is scpB [H]

Identifier: 114798683

GI number: 114798683

Start: 2121640

End: 2122659

Strand: Reverse

Name: scpB [H]

Synonym: HNE_2046

Alternate gene names: 114798683

Gene position: 2122659-2121640 (Counterclockwise)

Preceding gene: 114797903

Following gene: 114798961

Centisome position: 57.29

GC content: 61.37

Gene sequence:

>1020_bases
ATGCAGTCGCTTGAGATGTACCAGATGAACGATGACACCGCACAAGAGCAGAACGCTCACGATCCGCAGGCGGAGTTTCC
GGGACTGACGACACCTGCCTTTGAAGGCACGCGCGAGGAGCTCGTGGCGGAGGGCGTTCGCCGGGCTGAAGCCGTGCTGT
TTGCTGCGGGCCAGCCACTTTCGGCCGAGCAGGTGGCACAGGTGCTGCCCCAAGGCATTGAGGCGGGCGAAGTGCTCATG
GCGCTGCGCAGTCTTTATGCCAAGCGCGGCGTGAACCTCGTCGAGGTCGCCGGCAAGTGGCGCTTCCAGACAGCGCAGGA
CCTTTCCTGGCTGTTTGTCGAGGAACGTCAGGTCCAGAAGAAGCTCGGCCAGGCCGCGATGGAGACGCTCTCGATCATCG
CCTATGGCCAGCCCGTTACACGCGCCGAAATCGAAGCGGTACGCGGCGTTGCTGTCGCCAAGACGGTGATTGATACACTG
CTGGAAACCGGCTGGGTGCGCACACGCGGCCGCCGCAAAACGCCCGGCCTACCGATCTGCTACGGCACGACTGACAAGTT
CCTTGAGCATTTTGGCCTCGAAAGCCTCGACACCCTTCCGGGCAAGGCGGACCTTGAAGCCGAAGGTCTGCTCTCTGACG
TGATCCCGTCGGGTTTCCAGATGCCGGATGAAGAAGCGCTCACCGAAGATGATGTGCTGATCAATGATCTCGGCGAACTG
GCCGATACTGAATCCTTCGTGACTGACTTTGTGTCCGACGAGGATGGAGTTGAAGACGAGGCCGTCGCAGAAGCGCCGCA
GGCGGAGCAGGTTTCTGCCGCTGAGCCGGAAGCCATCGAGGAAGACGAATTCGAGGATGACGGCGCTGTCAGCGTCTTCG
CCTACACCCGCGCGCCAGAACGCACAAAAGAAGAGACGGACGAATTTGACGGGGCCGACATAAAGGCCGCTGTCATGCGC
CTGCGTAAGGAAACCCGCGTGCCGCAGCAACCGATGGATAGCTGGCGCGACGACGAATAG

Upstream 100 bases:

>100_bases
TTGGAGCTGACGCGCGACGGCGAAGTAGACCTGCGCCAGGACACGCATTTCGCGCCGATCTATATGCGCCGCATCGCCGT
CCGCCCGTCGGAGATGGCCG

Downstream 100 bases:

>100_bases
GCCCGCCCCGTGCAGCAAGAGAGCCCCGTGATCCCCGCCGATGAACTCCCCGTCAGCGTCTGGGTGTGGGATCTCGACAT
TGACGCACCCACCGCTGCGG

Product: segregation and condensation protein B

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 339; Mature: 339

Protein sequence:

>339_residues
MQSLEMYQMNDDTAQEQNAHDPQAEFPGLTTPAFEGTREELVAEGVRRAEAVLFAAGQPLSAEQVAQVLPQGIEAGEVLM
ALRSLYAKRGVNLVEVAGKWRFQTAQDLSWLFVEERQVQKKLGQAAMETLSIIAYGQPVTRAEIEAVRGVAVAKTVIDTL
LETGWVRTRGRRKTPGLPICYGTTDKFLEHFGLESLDTLPGKADLEAEGLLSDVIPSGFQMPDEEALTEDDVLINDLGEL
ADTESFVTDFVSDEDGVEDEAVAEAPQAEQVSAAEPEAIEEDEFEDDGAVSVFAYTRAPERTKEETDEFDGADIKAAVMR
LRKETRVPQQPMDSWRDDE

Sequences:

>Translated_339_residues
MQSLEMYQMNDDTAQEQNAHDPQAEFPGLTTPAFEGTREELVAEGVRRAEAVLFAAGQPLSAEQVAQVLPQGIEAGEVLM
ALRSLYAKRGVNLVEVAGKWRFQTAQDLSWLFVEERQVQKKLGQAAMETLSIIAYGQPVTRAEIEAVRGVAVAKTVIDTL
LETGWVRTRGRRKTPGLPICYGTTDKFLEHFGLESLDTLPGKADLEAEGLLSDVIPSGFQMPDEEALTEDDVLINDLGEL
ADTESFVTDFVSDEDGVEDEAVAEAPQAEQVSAAEPEAIEEDEFEDDGAVSVFAYTRAPERTKEETDEFDGADIKAAVMR
LRKETRVPQQPMDSWRDDE
>Mature_339_residues
MQSLEMYQMNDDTAQEQNAHDPQAEFPGLTTPAFEGTREELVAEGVRRAEAVLFAAGQPLSAEQVAQVLPQGIEAGEVLM
ALRSLYAKRGVNLVEVAGKWRFQTAQDLSWLFVEERQVQKKLGQAAMETLSIIAYGQPVTRAEIEAVRGVAVAKTVIDTL
LETGWVRTRGRRKTPGLPICYGTTDKFLEHFGLESLDTLPGKADLEAEGLLSDVIPSGFQMPDEEALTEDDVLINDLGEL
ADTESFVTDFVSDEDGVEDEAVAEAPQAEQVSAAEPEAIEEDEFEDDGAVSVFAYTRAPERTKEETDEFDGADIKAAVMR
LRKETRVPQQPMDSWRDDE

Specific function: May participate in chromosomal partitioning during cell division (Potential) [H]

COG id: COG1386

COG function: function code K; Predicted transcriptional regulator containing the HTH domain

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the scpB family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005234
- InterPro:   IPR011991 [H]

Pfam domain/function: PF04079 DUF387 [H]

EC number: NA

Molecular weight: Translated: 37359; Mature: 37359

Theoretical pI: Translated: 3.94; Mature: 3.94

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQSLEMYQMNDDTAQEQNAHDPQAEFPGLTTPAFEGTREELVAEGVRRAEAVLFAAGQPL
CCCCCEEECCCCHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHEECCCCC
SAEQVAQVLPQGIEAGEVLMALRSLYAKRGVNLVEVAGKWRFQTAQDLSWLFVEERQVQK
CHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCEEECCCCCCCCCHHHHHHHHHHHHHHHH
KLGQAAMETLSIIAYGQPVTRAEIEAVRGVAVAKTVIDTLLETGWVRTRGRRKTPGLPIC
HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCHHHCCCCCCCCCCCEE
YGTTDKFLEHFGLESLDTLPGKADLEAEGLLSDVIPSGFQMPDEEALTEDDVLINDLGEL
ECCHHHHHHHHCCHHHHCCCCCCCCCHHHHHHHHCCCCCCCCCHHHCCCCHHHHHHHHHH
ADTESFVTDFVSDEDGVEDEAVAEAPQAEQVSAAEPEAIEEDEFEDDGAVSVFAYTRAPE
HHHHHHHHHHHCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCH
RTKEETDEFDGADIKAAVMRLRKETRVPQQPMDSWRDDE
HHHHHHHHCCCCHHHHHHHHHHHHHCCCCCHHHHCCCCC
>Mature Secondary Structure
MQSLEMYQMNDDTAQEQNAHDPQAEFPGLTTPAFEGTREELVAEGVRRAEAVLFAAGQPL
CCCCCEEECCCCHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHEECCCCC
SAEQVAQVLPQGIEAGEVLMALRSLYAKRGVNLVEVAGKWRFQTAQDLSWLFVEERQVQK
CHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCEEECCCCCCCCCHHHHHHHHHHHHHHHH
KLGQAAMETLSIIAYGQPVTRAEIEAVRGVAVAKTVIDTLLETGWVRTRGRRKTPGLPIC
HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCHHHCCCCCCCCCCCEE
YGTTDKFLEHFGLESLDTLPGKADLEAEGLLSDVIPSGFQMPDEEALTEDDVLINDLGEL
ECCHHHHHHHHCCHHHHCCCCCCCCCHHHHHHHHCCCCCCCCCHHHCCCCHHHHHHHHHH
ADTESFVTDFVSDEDGVEDEAVAEAPQAEQVSAAEPEAIEEDEFEDDGAVSVFAYTRAPE
HHHHHHHHHHHCCCCCCCHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEECCCCH
RTKEETDEFDGADIKAAVMRLRKETRVPQQPMDSWRDDE
HHHHHHHHCCCCHHHHHHHHHHHHHCCCCCHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12704232 [H]