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The map label for this gene is yhdE [C]

Identifier: 114798603

GI number: 114798603

Start: 1097

End: 1693

Strand: Direct

Name: yhdE [C]

Synonym: HNE_0002

Alternate gene names: 114798603

Gene position: 1097-1693 (Clockwise)

Preceding gene: 114797376

Following gene: 114799600

Centisome position: 0.03

GC content: 61.98

Gene sequence:

>597_bases
TTGAGCCTCGCCGTTACGCTCGCCTCTACCAGCAAGAGCCGCCGGGCCCTGCTTGCCGCCGCCGGAGTCGAGGCAGACGG
CGTCGCGCCGAATGTTGACGAGGAATCCTTCCGCAACACGATGCGCGCCAACAAGCTGCCCGTCCGCGAACAGGCCATGC
AGCTGGCTGAGCTCAAAGCCATGCGCGTTTCGGCAAAGCGTCCGGGTCTCGTTATCGGCGGCGACCAGATGCTCGCGCTC
GGCGACGAAGCTTTCGACAAGCCTGCTGACCTTGAAGCGGCAAAAAACCATCTTCGCCAGCTGTCGGGAAAATCCCACAC
GCTGGAGACGGCCATTGTAATCTGCGAGGACGGCGCGCCCATCTGGCGCCATCTCGCCCGGCCAAAACTGACCATGCGCC
CGCTGACAGAAGACTTCATCGAGACCTATGTCTCGTCCTGTGGCGACGCGCTTCTCTCGACTGTGGGGGCTTACCAGCTC
GAGGGTCCAGGCGCGCAGCTGTTTACGCGGATCGAGGGAGATTATTTCTCCATTCTCGGCCTGCCGCTGCTGCCGCTTCT
GGATTACCTCCGTATCCGGAAAGTGCTTCCTACATGA

Upstream 100 bases:

>100_bases
TCCAGCGCAATGGCTGGAAGACGATTGATGTGTCCCGCCGCTCCGTAGAAGAAACGGCCGCGGGCATTCTCAACATGCTG
CATGAACGCTGGGGGCATTC

Downstream 100 bases:

>100_bases
CCCATCTTCTTGGCGTTGTGGGCGATCCTGTCGCCCATTCGCTTTCGCCTTTCATCCATAATGGATGGCTTCGCGCGCAT
CAGATTGACGCGGTTTATTC

Product: putative maf protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 198; Mature: 197

Protein sequence:

>198_residues
MSLAVTLASTSKSRRALLAAAGVEADGVAPNVDEESFRNTMRANKLPVREQAMQLAELKAMRVSAKRPGLVIGGDQMLAL
GDEAFDKPADLEAAKNHLRQLSGKSHTLETAIVICEDGAPIWRHLARPKLTMRPLTEDFIETYVSSCGDALLSTVGAYQL
EGPGAQLFTRIEGDYFSILGLPLLPLLDYLRIRKVLPT

Sequences:

>Translated_198_residues
MSLAVTLASTSKSRRALLAAAGVEADGVAPNVDEESFRNTMRANKLPVREQAMQLAELKAMRVSAKRPGLVIGGDQMLAL
GDEAFDKPADLEAAKNHLRQLSGKSHTLETAIVICEDGAPIWRHLARPKLTMRPLTEDFIETYVSSCGDALLSTVGAYQL
EGPGAQLFTRIEGDYFSILGLPLLPLLDYLRIRKVLPT
>Mature_197_residues
SLAVTLASTSKSRRALLAAAGVEADGVAPNVDEESFRNTMRANKLPVREQAMQLAELKAMRVSAKRPGLVIGGDQMLALG
DEAFDKPADLEAAKNHLRQLSGKSHTLETAIVICEDGAPIWRHLARPKLTMRPLTEDFIETYVSSCGDALLSTVGAYQLE
GPGAQLFTRIEGDYFSILGLPLLPLLDYLRIRKVLPT

Specific function: Unknown

COG id: COG0424

COG function: function code D; Nucleotide-binding protein implicated in inhibition of septum formation

Gene ontology:

Cell location: Cytoplasm (Potential)

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the maf family

Homologues:

Organism=Homo sapiens, GI117553627, Length=193, Percent_Identity=28.4974093264249, Blast_Score=66, Evalue=2e-11,
Organism=Escherichia coli, GI1789646, Length=184, Percent_Identity=32.6086956521739, Blast_Score=83, Evalue=1e-17,
Organism=Escherichia coli, GI87081830, Length=190, Percent_Identity=34.7368421052632, Blast_Score=82, Evalue=2e-17,
Organism=Drosophila melanogaster, GI78706856, Length=188, Percent_Identity=30.8510638297872, Blast_Score=70, Evalue=9e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y002_HYPNA (Q0C6A7)

Other databases:

- EMBL:   CP000158
- RefSeq:   YP_758736.1
- ProteinModelPortal:   Q0C6A7
- SMR:   Q0C6A7
- STRING:   Q0C6A7
- GeneID:   4290506
- GenomeReviews:   CP000158_GR
- KEGG:   hne:HNE_0002
- NMPDR:   fig|228405.5.peg.2
- TIGR:   HNE_0002
- eggNOG:   COG0424
- HOGENOM:   HBG414045
- OMA:   LVLGCDQ
- BioCyc:   HNEP81032:HNE_0002-MONOMER
- GO:   GO:0005737
- HAMAP:   MF_00528
- InterPro:   IPR003697
- PIRSF:   PIRSF006305

Pfam domain/function: PF02545 Maf

EC number: NA

Molecular weight: Translated: 21515; Mature: 21384

Theoretical pI: Translated: 6.79; Mature: 6.79

Prosite motif: NA

Important sites: ACT_SITE 34-34

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
3.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLAVTLASTSKSRRALLAAAGVEADGVAPNVDEESFRNTMRANKLPVREQAMQLAELKA
CCEEEEECCCCCHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHH
MRVSAKRPGLVIGGDQMLALGDEAFDKPADLEAAKNHLRQLSGKSHTLETAIVICEDGAP
HHHHCCCCCEEECCCCEEEECCHHCCCCCCHHHHHHHHHHHCCCCCEEEEEEEEECCCCH
IWRHLARPKLTMRPLTEDFIETYVSSCGDALLSTVGAYQLEGPGAQLFTRIEGDYFSILG
HHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCEEECCCCHHHHHHHCCCHHHHHH
LPLLPLLDYLRIRKVLPT
CCHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
SLAVTLASTSKSRRALLAAAGVEADGVAPNVDEESFRNTMRANKLPVREQAMQLAELKA
CEEEEECCCCCHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHCCCCHHHHHHHHHHHHH
MRVSAKRPGLVIGGDQMLALGDEAFDKPADLEAAKNHLRQLSGKSHTLETAIVICEDGAP
HHHHCCCCCEEECCCCEEEECCHHCCCCCCHHHHHHHHHHHCCCCCEEEEEEEEECCCCH
IWRHLARPKLTMRPLTEDFIETYVSSCGDALLSTVGAYQLEGPGAQLFTRIEGDYFSILG
HHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCEEECCCCHHHHHHHCCCHHHHHH
LPLLPLLDYLRIRKVLPT
CCHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA