Definition Hyphomonas neptunium ATCC 15444 chromosome, complete genome.
Accession NC_008358
Length 3,705,021

Click here to switch to the map view.

The map label for this gene is 114798561

Identifier: 114798561

GI number: 114798561

Start: 2869281

End: 2870369

Strand: Direct

Name: 114798561

Synonym: HNE_2709

Alternate gene names: NA

Gene position: 2869281-2870369 (Clockwise)

Preceding gene: 114798971

Following gene: 114798528

Centisome position: 77.44

GC content: 66.57

Gene sequence:

>1089_bases
ATGCTGCATCCTTCGACCAAGAAACTGATCGACAAGCTCAGCGAGATGACGCGCAAGCAGCGCGTCTCCTGGATCGAGGG
CGAGAACGGCACCATCGTGCATGACACCGAGGGCTACCGCGTCGTGCTGACGCCCGAGCCGCACGGCGTGGTGCTGACCG
ATGCTGTGGGCCGCGAAATCGAGACCTGCAGCCCGGAAGAAATCGCCGACGAGAAAGACAGCGCCGGGCGCCCCTATGCC
CAATTCATCGGGGAACTTTTCCGCGAGGCCCACCGCCATGCGCGCGGCGCCGAGAAGGCGATCCGCACGTTGCTCGCCGG
GCTGGAAGCGGCTGATGAGCCCCCGCCGGAGGCTGCAGCGCCTGAACCCGAAGCTGAGCCCGAGCCCGAGACACTGACCG
ATGAGACCGTCTCGATGGACGGCGAAACGGCGATCACGGCGGCCGTTGCCACGCTGGCCGACCAGATCAACAACACTGCG
CCCATGGCCGGGCCGGAGATTGCCGCGGCCCCTGAACCTGACCTGATTGCTGCAGAACCAGAGCCGCAGCCGGAACCAGA
GCCCGAGCCTGAACCTGAACCGGAGCTTGTCTCTGAACCCGCACCTGCGCCCCTGCCGGCGGCCTATGCCGAAACCGAGG
AGAGCGGTGAGGAGGAAGCTGAGCCAGAGGCCGAGGCCGAGGCGGAGGCCGAGCTTGAGGCGGCGCCGGAGGAGACGATG
GAGGAGGCCGCTGCGCTGGTGGCGCCTGAAGCTGCACCAGAGCCTGAACCTGTTGCGTTTGCGGCAGATCCCGAGCCTGA
ACCTACCCCTGCGCAGAGCCCGATGCAGCAGCGGTTTTCGCTGTCGGGCATCCCCTATGGGGTGGGCTTTGCGGGCACGC
AAACGATGACGCCGCCAGAAGAAAAGCCTGTAGAAACAGCGCCTTCGGAGCCGCGCGCGCTGGTCATCGACGGGACGGAA
GACCTGCCCGAGGGCATGCCGCATCTGGACGATGAGCCGGAGCTGCCGCCGCTGCCGGAAAGCCGGGATGAGGGCGATGA
GGAGGGTACGCCGCCGGCGATTCCGCGGCGGTTTAATCCCTGGAATTAA

Upstream 100 bases:

>100_bases
CCTCGCCCTCTGGCGTGGATGCAAGGTTTGAATCTTCTGCGCTGACCGGCTAGTCCTAGGCGCGGTGATGAACAAAAACG
GATGAGAAGGCGGGAAAAGA

Downstream 100 bases:

>100_bases
ACGGGTTTTTCCGCAGCCTTTTTCGGCGGGCGCGGGCCGACATGGGCCTCTCCCCGCGCTTTGGCGAGGTCGATCTGTTT
CTGGCGCTCGGCGAAGCGGG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 362; Mature: 362

Protein sequence:

>362_residues
MLHPSTKKLIDKLSEMTRKQRVSWIEGENGTIVHDTEGYRVVLTPEPHGVVLTDAVGREIETCSPEEIADEKDSAGRPYA
QFIGELFREAHRHARGAEKAIRTLLAGLEAADEPPPEAAAPEPEAEPEPETLTDETVSMDGETAITAAVATLADQINNTA
PMAGPEIAAAPEPDLIAAEPEPQPEPEPEPEPEPELVSEPAPAPLPAAYAETEESGEEEAEPEAEAEAEAELEAAPEETM
EEAAALVAPEAAPEPEPVAFAADPEPEPTPAQSPMQQRFSLSGIPYGVGFAGTQTMTPPEEKPVETAPSEPRALVIDGTE
DLPEGMPHLDDEPELPPLPESRDEGDEEGTPPAIPRRFNPWN

Sequences:

>Translated_362_residues
MLHPSTKKLIDKLSEMTRKQRVSWIEGENGTIVHDTEGYRVVLTPEPHGVVLTDAVGREIETCSPEEIADEKDSAGRPYA
QFIGELFREAHRHARGAEKAIRTLLAGLEAADEPPPEAAAPEPEAEPEPETLTDETVSMDGETAITAAVATLADQINNTA
PMAGPEIAAAPEPDLIAAEPEPQPEPEPEPEPEPELVSEPAPAPLPAAYAETEESGEEEAEPEAEAEAEAELEAAPEETM
EEAAALVAPEAAPEPEPVAFAADPEPEPTPAQSPMQQRFSLSGIPYGVGFAGTQTMTPPEEKPVETAPSEPRALVIDGTE
DLPEGMPHLDDEPELPPLPESRDEGDEEGTPPAIPRRFNPWN
>Mature_362_residues
MLHPSTKKLIDKLSEMTRKQRVSWIEGENGTIVHDTEGYRVVLTPEPHGVVLTDAVGREIETCSPEEIADEKDSAGRPYA
QFIGELFREAHRHARGAEKAIRTLLAGLEAADEPPPEAAAPEPEAEPEPETLTDETVSMDGETAITAAVATLADQINNTA
PMAGPEIAAAPEPDLIAAEPEPQPEPEPEPEPEPELVSEPAPAPLPAAYAETEESGEEEAEPEAEAEAEAELEAAPEETM
EEAAALVAPEAAPEPEPVAFAADPEPEPTPAQSPMQQRFSLSGIPYGVGFAGTQTMTPPEEKPVETAPSEPRALVIDGTE
DLPEGMPHLDDEPELPPLPESRDEGDEEGTPPAIPRRFNPWN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 38687; Mature: 38687

Theoretical pI: Translated: 3.74; Mature: 3.74

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLHPSTKKLIDKLSEMTRKQRVSWIEGENGTIVHDTEGYRVVLTPEPHGVVLTDAVGREI
CCCCHHHHHHHHHHHHHHHHHHCEEECCCCEEEECCCCCEEEECCCCCCEEEEHHHCCHH
ETCSPEEIADEKDSAGRPYAQFIGELFREAHRHARGAEKAIRTLLAGLEAADEPPPEAAA
HCCCHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
PEPEAEPEPETLTDETVSMDGETAITAAVATLADQINNTAPMAGPEIAAAPEPDLIAAEP
CCCCCCCCCCCCCCHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEECCC
EPQPEPEPEPEPEPELVSEPAPAPLPAAYAETEESGEEEAEPEAEAEAEAELEAAPEETM
CCCCCCCCCCCCCHHHHCCCCCCCCCHHHHHHHHCCCHHCCCCHHHHHHHHHHCCCHHHH
EEAAALVAPEAAPEPEPVAFAADPEPEPTPAQSPMQQRFSLSGIPYGVGFAGTQTMTPPE
HHHHHHHCCCCCCCCCCEEEECCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCC
EKPVETAPSEPRALVIDGTEDLPEGMPHLDDEPELPPLPESRDEGDEEGTPPAIPRRFNP
CCCCCCCCCCCCEEEEECCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
WN
CC
>Mature Secondary Structure
MLHPSTKKLIDKLSEMTRKQRVSWIEGENGTIVHDTEGYRVVLTPEPHGVVLTDAVGREI
CCCCHHHHHHHHHHHHHHHHHHCEEECCCCEEEECCCCCEEEECCCCCCEEEEHHHCCHH
ETCSPEEIADEKDSAGRPYAQFIGELFREAHRHARGAEKAIRTLLAGLEAADEPPPEAAA
HCCCHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
PEPEAEPEPETLTDETVSMDGETAITAAVATLADQINNTAPMAGPEIAAAPEPDLIAAEP
CCCCCCCCCCCCCCHHHCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEECCC
EPQPEPEPEPEPEPELVSEPAPAPLPAAYAETEESGEEEAEPEAEAEAEAELEAAPEETM
CCCCCCCCCCCCCHHHHCCCCCCCCCHHHHHHHHCCCHHCCCCHHHHHHHHHHCCCHHHH
EEAAALVAPEAAPEPEPVAFAADPEPEPTPAQSPMQQRFSLSGIPYGVGFAGTQTMTPPE
HHHHHHHCCCCCCCCCCEEEECCCCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCC
EKPVETAPSEPRALVIDGTEDLPEGMPHLDDEPELPPLPESRDEGDEEGTPPAIPRRFNP
CCCCCCCCCCCCEEEEECCHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
WN
CC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA