| Definition | Hyphomonas neptunium ATCC 15444 chromosome, complete genome. |
|---|---|
| Accession | NC_008358 |
| Length | 3,705,021 |
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The map label for this gene is 114798531
Identifier: 114798531
GI number: 114798531
Start: 2701302
End: 2702693
Strand: Reverse
Name: 114798531
Synonym: HNE_2549
Alternate gene names: NA
Gene position: 2702693-2701302 (Counterclockwise)
Preceding gene: 114798489
Following gene: 114799894
Centisome position: 72.95
GC content: 59.41
Gene sequence:
>1392_bases ATGGAGGCGCTTGATCTCATCCTTCTGGAGCCGCACGAGGCGCTGATTCGGTCCTTGTTGACAGCGGGGGCTGGGTCGGA GCGCTCGGCTTACATGCTGTTTGGCATCGCCGATATCCAAGTCGATCCATGGTCAAACCAGCCGCGGCGCCGGCTGGTTT CTCATCGTTTCCAATCCATCAGCTGTCACGACCTTGTATCAGCATCAGCGCGGCATGTGACTTGGCAGACCGATGGCTTC ATGCGCCTCCTGAACGAGGCCAAGGAAATGGGTCTCGCTCCAGCCCTAGTTCATACCCATCCCGACGGCCAGGCCAAGTT CTCTGAGCAGGACAACCGCAACGAAGCCGAGCTGGCCCGCACCGCTCTTTTGAAGGGGGCGCCAGGATTGATCAGCGTCG TTATTGCCGGGAATGGCGATATTGCTGCACGCTTTTGGGCGCAGACAGAGAAAGCAGAAGACATCGGTCGGATCCTGCAT GTCGGACCGCGCCTGCATATCTCGGGAGTGAAGGGAGCGCCGGCGGGTTTTCTGGATCGCCAGGTCCGGCTCTTCGGGCA TGAAGCCTCGCGTCAAATAGCTGGGTTCCGATGTGGGATTGCTGGTGGAGGTGCGACCGGAAGTGCCGTCTTGCCCCTGC TGTTGCGGCTTGGGGTTCAGGAGGCCATCCAATTCGAGAAGGACATCGTGGACGAAACAAATCTCAACCGCCTTCACGGA GCGCGGCGCTCGGATGTCGATGAAAAAATGCCTAAGACCGCTATTCACACGCGAACGGTGAAGGAATCCGGGCTCGGCAT GACCTTGGTGAGCGTGGATGCCTGGGCCGGAAACCCGCAAACCTGGGATGCTCTAAAAGCGTGCGATGTGATCTTTTGCT GCACAGATGACCACGCCGGACGGTTGTTTCTCAATCGCTTCGCGCGGTTCTACGGCATCCCCGTTATCGATGTCGGACTC GCGATGCAGCGGCGGACCGACACAGCATTTGATCTCTTTGCCCGCGTTTCGACGCTAGTGCCTGGGCATTCCTGCTTACT TTGCGGCGGCTTCGTCGATCCGCGGCGAGCGCGTGAAGAAGCAATGCGGCGCAATGATCCCGATGCATATGAGCGGTTGA AAGAAGAAGCCTACGTTCTGGGTGAAGGTGATCCGTCCCCGGCTGTCGTCACCTTCACGACCGAAGCGGCGGCGATGGCA GTCAATGAGTGGTTGGCCGGAGTGACCGGGCTTGCTGGAGAGGCCGGAATGGTGTCTACGCGGATGCGGCGCTTTCACGC CAGAGACGAGCGCAGACCGTTTGTTGAGTCGCAACCCGATTGCCCCTGCTGCAACCAGCCAGCAACACTTGGTCGGGCAG ATATGCAACCGTTTCTGGACGTGGTCAGCTGA
Upstream 100 bases:
>100_bases AGCGCTGGTCCCGTCATAACGATGCGTGGCGCCCAGGCGTTGACGGACTTCAAACCATGGTCGCCCGCGTCCAAACAGCA TTGGCGGAGGCCCGGGCGTA
Downstream 100 bases:
>100_bases CATGAAAGAGAAAATTTCACGGTTATTGAGAAGCGTCCACCTATTGCAGTTTAACTTTTTGGCGACCCGAGTTTCGAGAT TGCCGGACTCTTCAACAATG
Product: ThiF family protein
Products: NA
Alternate protein names: HesA/MoeB/ThiF Family Protein
Number of amino acids: Translated: 463; Mature: 463
Protein sequence:
>463_residues MEALDLILLEPHEALIRSLLTAGAGSERSAYMLFGIADIQVDPWSNQPRRRLVSHRFQSISCHDLVSASARHVTWQTDGF MRLLNEAKEMGLAPALVHTHPDGQAKFSEQDNRNEAELARTALLKGAPGLISVVIAGNGDIAARFWAQTEKAEDIGRILH VGPRLHISGVKGAPAGFLDRQVRLFGHEASRQIAGFRCGIAGGGATGSAVLPLLLRLGVQEAIQFEKDIVDETNLNRLHG ARRSDVDEKMPKTAIHTRTVKESGLGMTLVSVDAWAGNPQTWDALKACDVIFCCTDDHAGRLFLNRFARFYGIPVIDVGL AMQRRTDTAFDLFARVSTLVPGHSCLLCGGFVDPRRAREEAMRRNDPDAYERLKEEAYVLGEGDPSPAVVTFTTEAAAMA VNEWLAGVTGLAGEAGMVSTRMRRFHARDERRPFVESQPDCPCCNQPATLGRADMQPFLDVVS
Sequences:
>Translated_463_residues MEALDLILLEPHEALIRSLLTAGAGSERSAYMLFGIADIQVDPWSNQPRRRLVSHRFQSISCHDLVSASARHVTWQTDGF MRLLNEAKEMGLAPALVHTHPDGQAKFSEQDNRNEAELARTALLKGAPGLISVVIAGNGDIAARFWAQTEKAEDIGRILH VGPRLHISGVKGAPAGFLDRQVRLFGHEASRQIAGFRCGIAGGGATGSAVLPLLLRLGVQEAIQFEKDIVDETNLNRLHG ARRSDVDEKMPKTAIHTRTVKESGLGMTLVSVDAWAGNPQTWDALKACDVIFCCTDDHAGRLFLNRFARFYGIPVIDVGL AMQRRTDTAFDLFARVSTLVPGHSCLLCGGFVDPRRAREEAMRRNDPDAYERLKEEAYVLGEGDPSPAVVTFTTEAAAMA VNEWLAGVTGLAGEAGMVSTRMRRFHARDERRPFVESQPDCPCCNQPATLGRADMQPFLDVVS >Mature_463_residues MEALDLILLEPHEALIRSLLTAGAGSERSAYMLFGIADIQVDPWSNQPRRRLVSHRFQSISCHDLVSASARHVTWQTDGF MRLLNEAKEMGLAPALVHTHPDGQAKFSEQDNRNEAELARTALLKGAPGLISVVIAGNGDIAARFWAQTEKAEDIGRILH VGPRLHISGVKGAPAGFLDRQVRLFGHEASRQIAGFRCGIAGGGATGSAVLPLLLRLGVQEAIQFEKDIVDETNLNRLHG ARRSDVDEKMPKTAIHTRTVKESGLGMTLVSVDAWAGNPQTWDALKACDVIFCCTDDHAGRLFLNRFARFYGIPVIDVGL AMQRRTDTAFDLFARVSTLVPGHSCLLCGGFVDPRRAREEAMRRNDPDAYERLKEEAYVLGEGDPSPAVVTFTTEAAAMA VNEWLAGVTGLAGEAGMVSTRMRRFHARDERRPFVESQPDCPCCNQPATLGRADMQPFLDVVS
Specific function: Unknown
COG id: COG0476
COG function: function code H; Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 2
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 50629; Mature: 50629
Theoretical pI: Translated: 6.62; Mature: 6.62
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEALDLILLEPHEALIRSLLTAGAGSERSAYMLFGIADIQVDPWSNQPRRRLVSHRFQSI CCCCEEEEECCHHHHHHHHHHCCCCCCCCEEEEEEEEEEEECCCCCCHHHHHHHHHHCCC SCHDLVSASARHVTWQTDGFMRLLNEAKEMGLAPALVHTHPDGQAKFSEQDNRNEAELAR CHHHHHHCCCCEEEECCHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCHHHHHH TALLKGAPGLISVVIAGNGDIAARFWAQTEKAEDIGRILHVGPRLHISGVKGAPAGFLDR HHHHCCCCCEEEEEEECCCCEEEHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCHHHH QVRLFGHEASRQIAGFRCGIAGGGATGSAVLPLLLRLGVQEAIQFEKDIVDETNLNRLHG HHHHHCCHHHHHHCCEEEECCCCCCCHHHHHHHHHHHCHHHHHHHHHHHHCCCCCHHHCC ARRSDVDEKMPKTAIHTRTVKESGLGMTLVSVDAWAGNPQTWDALKACDVIFCCTDDHAG CCCCCHHHHCCHHHHHHHHHHHCCCCEEEEEEECCCCCCCCHHHHHHCCEEEEECCCCCC RLFLNRFARFYGIPVIDVGLAMQRRTDTAFDLFARVSTLVPGHSCLLCGGFVDPRRAREE HHHHHHHHHHHCCCEEECCHHHHHCCCHHHHHHHHHHHHCCCCCEEEECCCCCHHHHHHH AMRRNDPDAYERLKEEAYVLGEGDPSPAVVTFTTEAAAMAVNEWLAGVTGLAGEAGMVST HHHCCCCHHHHHHHHCEEEEECCCCCCEEEEEECHHHHHHHHHHHHHHHCCCCCCHHHHH RMRRFHARDERRPFVESQPDCPCCNQPATLGRADMQPFLDVVS HHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCC >Mature Secondary Structure MEALDLILLEPHEALIRSLLTAGAGSERSAYMLFGIADIQVDPWSNQPRRRLVSHRFQSI CCCCEEEEECCHHHHHHHHHHCCCCCCCCEEEEEEEEEEEECCCCCCHHHHHHHHHHCCC SCHDLVSASARHVTWQTDGFMRLLNEAKEMGLAPALVHTHPDGQAKFSEQDNRNEAELAR CHHHHHHCCCCEEEECCHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCCCCHHHHHH TALLKGAPGLISVVIAGNGDIAARFWAQTEKAEDIGRILHVGPRLHISGVKGAPAGFLDR HHHHCCCCCEEEEEEECCCCEEEHHHHHHHHHHHHHHHHHCCCEEEECCCCCCCCCHHHH QVRLFGHEASRQIAGFRCGIAGGGATGSAVLPLLLRLGVQEAIQFEKDIVDETNLNRLHG HHHHHCCHHHHHHCCEEEECCCCCCCHHHHHHHHHHHCHHHHHHHHHHHHCCCCCHHHCC ARRSDVDEKMPKTAIHTRTVKESGLGMTLVSVDAWAGNPQTWDALKACDVIFCCTDDHAG CCCCCHHHHCCHHHHHHHHHHHCCCCEEEEEEECCCCCCCCHHHHHHCCEEEEECCCCCC RLFLNRFARFYGIPVIDVGLAMQRRTDTAFDLFARVSTLVPGHSCLLCGGFVDPRRAREE HHHHHHHHHHHCCCEEECCHHHHHCCCHHHHHHHHHHHHCCCCCEEEECCCCCHHHHHHH AMRRNDPDAYERLKEEAYVLGEGDPSPAVVTFTTEAAAMAVNEWLAGVTGLAGEAGMVST HHHCCCCHHHHHHHHCEEEEECCCCCCEEEEEECHHHHHHHHHHHHHHHCCCCCCHHHHH RMRRFHARDERRPFVESQPDCPCCNQPATLGRADMQPFLDVVS HHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA