| Definition | Hyphomonas neptunium ATCC 15444 chromosome, complete genome. |
|---|---|
| Accession | NC_008358 |
| Length | 3,705,021 |
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The map label for this gene is 114798523
Identifier: 114798523
GI number: 114798523
Start: 1235996
End: 1236565
Strand: Reverse
Name: 114798523
Synonym: HNE_1216
Alternate gene names: NA
Gene position: 1236565-1235996 (Counterclockwise)
Preceding gene: 114797408
Following gene: 114799020
Centisome position: 33.38
GC content: 61.23
Gene sequence:
>570_bases ATGAGCATCCGGCCCTGGACGATCCTATCTTCGAAGCAGGTGATGAAGGACAGCTTCATGGGCCTGCGCACCGACCGGTG CCGGCGGGAGGATGGGCATATCGTCGAGGCTTATCATGTGACCGAGCTGACCGATTGGGTGACGGTGATCCCGGTGACGG ATGCGGGCAATATCGTGCTGGTGCGGGAGTATCGCCATGCGGCGGGGGTGATCCTGACGGGGCTGCCGGGCGGCGTGGCT GATCCGGGCGAAACGAATTGGGCAGACGTTGGCGCGCGGGAGCTGCGCGAGGAGACGGGTTATGTGGCGCGCGAGATGGT GTGGGTGGGTACGTGCTATCCCAATCCCGCGACGCAGGATAACCGACTGCACTATTACCTCGCGCTGGGCTGCACGCAGG ATGCCGATCAGTCGCTTGATCCGAATGAGGAGATCGAGGTTCTCGAAATGCCGTATTCGGAGTTTCTCGATTATGGCAGC CTGAAGGTTCAGCACGCACTTCACGCCGCGGGGCTGTTTTATGCCGAGCGGTATTTCCTGAAGCACCCTGACCAACGCCC CAAGGAGTAA
Upstream 100 bases:
>100_bases ATCCCGGCCAGCGGCATGGCATTCAGGGGGAAGCCTTGCAGGTGCATCTGATGCGCACACGGATGGCGTTTCTGGAGCGG CACCTGAAGGCGCCCGCCCC
Downstream 100 bases:
>100_bases AGCCATGCCCGCCTTTCAACCGACTGCTGACCAGTTCCGCGCGTTCCGGGATGATCCGTATGATGGGTCGGTGGCGCAGG TGAATATTCTGAAGTTCAGG
Product: NUDIX family hydrolase
Products: NA
Alternate protein names: ADP-Ribose Pyrophosphatase; MutT/Nudix Family Protein; Nudix Hydrolase; Hydrolase NUDIX Family; Hydrolase Protein; NTP Pyrophosphohydrolase; Nudix Family Protein; NUDIX/MutT-Family Protein; MutT/NUDIX NTP Pyrophosphatase; ADPribose Diphosphatase; MutT/NUDIX Family Protein; Hydrolase Protein MutT/Nudix Family; Phosphohydrolase; NUDIX Family Hydrolase; NTP Pyrophosphohydrolases; MutT/NUDIX Family ADP Compounds Hydrolase; MutT/Nudix Family Phosphohydrolase; ADP-Ribose Pyrophosphatase-Like Protein; Phosphohydrolase MutT/Nudix Family; Phosphohydrolase MutT/NUDIX Family; MutT/NUDIX Family Hydrolase; Nudix/MutT Family Protein
Number of amino acids: Translated: 189; Mature: 188
Protein sequence:
>189_residues MSIRPWTILSSKQVMKDSFMGLRTDRCRREDGHIVEAYHVTELTDWVTVIPVTDAGNIVLVREYRHAAGVILTGLPGGVA DPGETNWADVGARELREETGYVAREMVWVGTCYPNPATQDNRLHYYLALGCTQDADQSLDPNEEIEVLEMPYSEFLDYGS LKVQHALHAAGLFYAERYFLKHPDQRPKE
Sequences:
>Translated_189_residues MSIRPWTILSSKQVMKDSFMGLRTDRCRREDGHIVEAYHVTELTDWVTVIPVTDAGNIVLVREYRHAAGVILTGLPGGVA DPGETNWADVGARELREETGYVAREMVWVGTCYPNPATQDNRLHYYLALGCTQDADQSLDPNEEIEVLEMPYSEFLDYGS LKVQHALHAAGLFYAERYFLKHPDQRPKE >Mature_188_residues SIRPWTILSSKQVMKDSFMGLRTDRCRREDGHIVEAYHVTELTDWVTVIPVTDAGNIVLVREYRHAAGVILTGLPGGVAD PGETNWADVGARELREETGYVAREMVWVGTCYPNPATQDNRLHYYLALGCTQDADQSLDPNEEIEVLEMPYSEFLDYGSL KVQHALHAAGLFYAERYFLKHPDQRPKE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21442; Mature: 21311
Theoretical pI: Translated: 4.80; Mature: 4.80
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSIRPWTILSSKQVMKDSFMGLRTDRCRREDGHIVEAYHVTELTDWVTVIPVTDAGNIVL CCCCCEEEECCHHHHHHHHCCCCCHHHCCCCCCEEEEEEEEECCCEEEEEEECCCCCEEE VREYRHAAGVILTGLPGGVADPGETNWADVGARELREETGYVAREMVWVGTCYPNPATQD EEECCCCCCEEEECCCCCCCCCCCCCCHHHCHHHHHHHHCHHEEEEEEEEECCCCCCCCC NRLHYYLALGCTQDADQSLDPNEEIEVLEMPYSEFLDYGSLKVQHALHAAGLFYAERYFL CCEEEEEEEECCCCCCCCCCCCCCEEEEECCHHHHHCCCCCHHHHHHHHHHHHHHHHHHH KHPDQRPKE CCCCCCCCC >Mature Secondary Structure SIRPWTILSSKQVMKDSFMGLRTDRCRREDGHIVEAYHVTELTDWVTVIPVTDAGNIVL CCCCEEEECCHHHHHHHHCCCCCHHHCCCCCCEEEEEEEEECCCEEEEEEECCCCCEEE VREYRHAAGVILTGLPGGVADPGETNWADVGARELREETGYVAREMVWVGTCYPNPATQD EEECCCCCCEEEECCCCCCCCCCCCCCHHHCHHHHHHHHCHHEEEEEEEEECCCCCCCCC NRLHYYLALGCTQDADQSLDPNEEIEVLEMPYSEFLDYGSLKVQHALHAAGLFYAERYFL CCEEEEEEEECCCCCCCCCCCCCCEEEEECCHHHHHCCCCCHHHHHHHHHHHHHHHHHHH KHPDQRPKE CCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA