Click here to switch to the map view.

The map label for this gene is 114798502

Identifier: 114798502

GI number: 114798502

Start: 1385302

End: 1386189

Strand: Reverse

Name: 114798502

Synonym: HNE_1352

Alternate gene names: NA

Gene position: 1386189-1385302 (Counterclockwise)

Preceding gene: 114797234

Following gene: 114797523

Centisome position: 37.41

GC content: 65.2

Gene sequence:

>888_bases
GTGACCAGCGGCGGCGATTCCGTGACAAGCGGCAAGGCGGGTTTCCGCCTCGGCCCCTGGGCCAGCATCGCGCTGGTCAC
TGTGCCGGTGGTGCTGGTGAACGCGACCTCTGATCTGATCGAAATGAACCGCTCAGGTCTGCGCGTGCACCCGGCCGAGC
CCTTCATCTGGGAGATTTCAAGCGCCCTTGTTCTGGTGCTCATGGCGCCCCTGGTCGGATGGGCGGTGAAGCGCTGGCCT
CTCCGGGGCGGCGCCCTGCCGATGGCGCTGTTGATCCATGCCGCGCTGACCGTGCCCTTCTCGCTGGCGCATGTCGGCGT
CATGGTGCCCCTTCGGGAGCTGGCTTATCTGCCGACGCCCTGGGAGTATGACTTCTTTACGGGCGGCCTCTGGATGACGC
TCATCTATGAGTGGCGCAAGGACCTGATAACCTATGCCATCTTTGCCGGAGTCTACAGTCTCTACGCCTGGTGGCAGGCG
CGGGAAACGGCGCCTGCGCCCTCCCCCGCCGGCCCGCAGCGGATCGAAGTGCGCACCAGTTCGCGAACGATCTTCCTGAT
GCCCGGCGAGATCCTCTATCTGGAATCGGCCGGCAATTACGTGACCCTGCACACGGCAGCGGGCAGCCATCTGGTGCGCG
CAACGCTCTCAGACTGGGCCAAACGCCTGTCAGCCGCGGGCACATCCATGACAGATCAGGACAAATCCGGACAAATCGGG
ACAGTTTCAGCGCCCGGTTCCGACTTCGTGCGCATCCACCGCTCCCGCATCGTCAACCGTCACCACATCCGCGAAACCCG
CTCCACGGCATCGGGCGATTTCGAGCTGATCCTCTCAGACGGCACCGCGCTGACCGGCAGCCGGCGGTTCCGGAGCGCCC
TGGGCTGA

Upstream 100 bases:

>100_bases
CCTTGGGCAATGAGATTGCCCGGCTTCTTGCGCCCGCCTGTGGCTGGCGCTACGCCAATGCCACGAAAGGCGCCCCGGTG
GGACGAGCGGAGAGGCATCT

Downstream 100 bases:

>100_bases
GGCCCCGCCCGCACCGCTCAAATCTGTTGTTGCAAAAAATGACGCGTGTGTCATTTTTGAATCATGGATGCAAAGCCCTC
CCTCCTGTTTCGCCTGGTTG

Product: putative DNA-binding protein

Products: NA

Alternate protein names: Response Regulator Receiver Protein; Response Regulator Receiver Domain Protein; LytTR Family Two Component Transcriptional Regulator; Response Regulator Receiver Domain-Containing Protein; AlgR/AgrA/LytR Family Regulatory Protein; Transmembrane Sensory Transduction Protein LytT

Number of amino acids: Translated: 295; Mature: 294

Protein sequence:

>295_residues
MTSGGDSVTSGKAGFRLGPWASIALVTVPVVLVNATSDLIEMNRSGLRVHPAEPFIWEISSALVLVLMAPLVGWAVKRWP
LRGGALPMALLIHAALTVPFSLAHVGVMVPLRELAYLPTPWEYDFFTGGLWMTLIYEWRKDLITYAIFAGVYSLYAWWQA
RETAPAPSPAGPQRIEVRTSSRTIFLMPGEILYLESAGNYVTLHTAAGSHLVRATLSDWAKRLSAAGTSMTDQDKSGQIG
TVSAPGSDFVRIHRSRIVNRHHIRETRSTASGDFELILSDGTALTGSRRFRSALG

Sequences:

>Translated_295_residues
MTSGGDSVTSGKAGFRLGPWASIALVTVPVVLVNATSDLIEMNRSGLRVHPAEPFIWEISSALVLVLMAPLVGWAVKRWP
LRGGALPMALLIHAALTVPFSLAHVGVMVPLRELAYLPTPWEYDFFTGGLWMTLIYEWRKDLITYAIFAGVYSLYAWWQA
RETAPAPSPAGPQRIEVRTSSRTIFLMPGEILYLESAGNYVTLHTAAGSHLVRATLSDWAKRLSAAGTSMTDQDKSGQIG
TVSAPGSDFVRIHRSRIVNRHHIRETRSTASGDFELILSDGTALTGSRRFRSALG
>Mature_294_residues
TSGGDSVTSGKAGFRLGPWASIALVTVPVVLVNATSDLIEMNRSGLRVHPAEPFIWEISSALVLVLMAPLVGWAVKRWPL
RGGALPMALLIHAALTVPFSLAHVGVMVPLRELAYLPTPWEYDFFTGGLWMTLIYEWRKDLITYAIFAGVYSLYAWWQAR
ETAPAPSPAGPQRIEVRTSSRTIFLMPGEILYLESAGNYVTLHTAAGSHLVRATLSDWAKRLSAAGTSMTDQDKSGQIGT
VSAPGSDFVRIHRSRIVNRHHIRETRSTASGDFELILSDGTALTGSRRFRSALG

Specific function: Unknown

COG id: COG3279

COG function: function code KT; Response regulator of the LytR/AlgR family

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 32203; Mature: 32072

Theoretical pI: Translated: 9.96; Mature: 9.96

Prosite motif: PS50930 HTH_LYTTR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTSGGDSVTSGKAGFRLGPWASIALVTVPVVLVNATSDLIEMNRSGLRVHPAEPFIWEIS
CCCCCCCCCCCCCCCEECCCHHHHHHHHHHHEECCCHHHHHHCCCCCEEECCCCHHHHHH
SALVLVLMAPLVGWAVKRWPLRGGALPMALLIHAALTVPFSLAHVGVMVPLRELAYLPTP
HHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCC
WEYDFFTGGLWMTLIYEWRKDLITYAIFAGVYSLYAWWQARETAPAPSPAGPQRIEVRTS
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEC
SRTIFLMPGEILYLESAGNYVTLHTAAGSHLVRATLSDWAKRLSAAGTSMTDQDKSGQIG
CCEEEEECCEEEEEECCCCEEEEEECCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEE
TVSAPGSDFVRIHRSRIVNRHHIRETRSTASGDFELILSDGTALTGSRRFRSALG
EECCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCEECCCHHHHHHCC
>Mature Secondary Structure 
TSGGDSVTSGKAGFRLGPWASIALVTVPVVLVNATSDLIEMNRSGLRVHPAEPFIWEIS
CCCCCCCCCCCCCCEECCCHHHHHHHHHHHEECCCHHHHHHCCCCCEEECCCCHHHHHH
SALVLVLMAPLVGWAVKRWPLRGGALPMALLIHAALTVPFSLAHVGVMVPLRELAYLPTP
HHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCC
WEYDFFTGGLWMTLIYEWRKDLITYAIFAGVYSLYAWWQARETAPAPSPAGPQRIEVRTS
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEC
SRTIFLMPGEILYLESAGNYVTLHTAAGSHLVRATLSDWAKRLSAAGTSMTDQDKSGQIG
CCEEEEECCEEEEEECCCCEEEEEECCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEE
TVSAPGSDFVRIHRSRIVNRHHIRETRSTASGDFELILSDGTALTGSRRFRSALG
EECCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCCEECCCHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA