| Definition | Hyphomonas neptunium ATCC 15444 chromosome, complete genome. |
|---|---|
| Accession | NC_008358 |
| Length | 3,705,021 |
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The map label for this gene is ytfP [H]
Identifier: 114798488
GI number: 114798488
Start: 734501
End: 735694
Strand: Direct
Name: ytfP [H]
Synonym: HNE_0722
Alternate gene names: 114798488
Gene position: 734501-735694 (Clockwise)
Preceding gene: 114797652
Following gene: 114799912
Centisome position: 19.82
GC content: 67.25
Gene sequence:
>1194_bases ATGAAACAGGTCGCAATCATCGGGGCAGGGCCAGCGGGCCTGATGGCGGCAGAGGCTGCGCTGGAACGCGGCGCGCGCGT CGCGATCTATGACGCAATGCCCAGCCCTGCGCGCAAATTCCTGATGGCCGGCAAAAGCGGTCTCAACATCACGCATTCGG AAGACGAGAGTTTATTCCGTTCCCGGTATACCGCGCCGGACGCCCGCCTTGCCGCAATGGTGGCCGCCTTCGGCCCGGCA GAGATCACCGCCTGGATGGCTGGGCTCGGCATCGAAAGTTATGCCGGTTCCTCAGGGCGCGTGTTTCCCATCGGCATGAA AGCCTCGCCCCTGCTGCGCCGCTGGCTCGCCCGGCTGGGCGAAGGCGGCGCCACGCTGCACACGCGCCATCGCTGGACGG GCTGGGACGCGGCCGGCGCGCTGGTGTTCGATACGCCCGATGGCGAAATGCGCGTGGCGGCAGACGCCACCATCCTGGCG CTGGGCGGGGCAAGCTGGTCGCGCCTTGGATCAGATGGGGCGTGGGCGGACATTCTGGCCGCGCGCGGCGTTGCGATAGA GCCCTTCGCGCCGTCCAATTGCGGCTTCATGGTGGACTGGTCCGCGCGCCTGCTCGCCGCTCATGAAGGCGCGCCGATAA AGAGTGTTTCTCTGTCGGCGGGCGGCAAGACCCAGCGCGGCGATTTCGTAATCACGCGCGCCGGCATTGAAAGCGGCGCG GTCTATCCGCTCTCGGCGGCATTGAGGCAGGAACTGGCGGGCAGGGGCGCGACCACGCTCCTGATCGATCTTCTGCCGGA TACGGACGAAGCTGCCCTCGCTGCGCGCCTCACCGGCGCCAACGCAAAAGACTCCGTTTCAAACCGCCTGCGCAAGGCGG CGCGGCTGGACGCGACAAAGATCGCCCTTCTCAATGAAGTGACCCAAGGCGGCGCGCCCAAAGACCCCGCCGCGCTCGCC CGCCTCCTCAAGGCGCTGCCCCTCATGCTCACCGGCACCGCCCCGATGGACACCGCCATCTCCACCGCCGGCGGCGTCGC CTGGGATGCGCTGGACAACCACCTGATGCTGAAGGCTGTTCCGGACACGTATTGTGTGGGCGAAATGGTAGCGTGGGATG CGCCTACGGGCGGCTATCTGCTGACGGCGTGTCTGGCGATGGGGCGGGGTGTGGGGTCTGCTGGAGGAAATTAG
Upstream 100 bases:
>100_bases CTGGGGTGACGATTACACCTATCTCTTCATCCTCGGCGAATGCGCCGCGCCGCCTGCGCAATAGCTGGCCACGCCCGCGC CCGCCCGCTAAAGGGGCGGG
Downstream 100 bases:
>100_bases CGAACGGAACGCGGCCCTCGAATACTATTTCGAGCCATCTGCATTAAACCTTCGGGGTTTCAAGCCGTAGAAATACATTA GGCAGATCACCAACTTTTGA
Product: pyridine nucleotide-disulfide oxidoreductase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 397; Mature: 397
Protein sequence:
>397_residues MKQVAIIGAGPAGLMAAEAALERGARVAIYDAMPSPARKFLMAGKSGLNITHSEDESLFRSRYTAPDARLAAMVAAFGPA EITAWMAGLGIESYAGSSGRVFPIGMKASPLLRRWLARLGEGGATLHTRHRWTGWDAAGALVFDTPDGEMRVAADATILA LGGASWSRLGSDGAWADILAARGVAIEPFAPSNCGFMVDWSARLLAAHEGAPIKSVSLSAGGKTQRGDFVITRAGIESGA VYPLSAALRQELAGRGATTLLIDLLPDTDEAALAARLTGANAKDSVSNRLRKAARLDATKIALLNEVTQGGAPKDPAALA RLLKALPLMLTGTAPMDTAISTAGGVAWDALDNHLMLKAVPDTYCVGEMVAWDAPTGGYLLTACLAMGRGVGSAGGN
Sequences:
>Translated_397_residues MKQVAIIGAGPAGLMAAEAALERGARVAIYDAMPSPARKFLMAGKSGLNITHSEDESLFRSRYTAPDARLAAMVAAFGPA EITAWMAGLGIESYAGSSGRVFPIGMKASPLLRRWLARLGEGGATLHTRHRWTGWDAAGALVFDTPDGEMRVAADATILA LGGASWSRLGSDGAWADILAARGVAIEPFAPSNCGFMVDWSARLLAAHEGAPIKSVSLSAGGKTQRGDFVITRAGIESGA VYPLSAALRQELAGRGATTLLIDLLPDTDEAALAARLTGANAKDSVSNRLRKAARLDATKIALLNEVTQGGAPKDPAALA RLLKALPLMLTGTAPMDTAISTAGGVAWDALDNHLMLKAVPDTYCVGEMVAWDAPTGGYLLTACLAMGRGVGSAGGN >Mature_397_residues MKQVAIIGAGPAGLMAAEAALERGARVAIYDAMPSPARKFLMAGKSGLNITHSEDESLFRSRYTAPDARLAAMVAAFGPA EITAWMAGLGIESYAGSSGRVFPIGMKASPLLRRWLARLGEGGATLHTRHRWTGWDAAGALVFDTPDGEMRVAADATILA LGGASWSRLGSDGAWADILAARGVAIEPFAPSNCGFMVDWSARLLAAHEGAPIKSVSLSAGGKTQRGDFVITRAGIESGA VYPLSAALRQELAGRGATTLLIDLLPDTDEAALAARLTGANAKDSVSNRLRKAARLDATKIALLNEVTQGGAPKDPAALA RLLKALPLMLTGTAPMDTAISTAGGVAWDALDNHLMLKAVPDTYCVGEMVAWDAPTGGYLLTACLAMGRGVGSAGGN
Specific function: Unknown
COG id: COG2081
COG function: function code R; Predicted flavoproteins
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004792 - InterPro: IPR013027 [H]
Pfam domain/function: PF03486 HI0933_like [H]
EC number: NA
Molecular weight: Translated: 40948; Mature: 40948
Theoretical pI: Translated: 8.07; Mature: 8.07
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKQVAIIGAGPAGLMAAEAALERGARVAIYDAMPSPARKFLMAGKSGLNITHSEDESLFR CCEEEEEECCCHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHCCCCCCCEECCCHHHHHH SRYTAPDARLAAMVAAFGPAEITAWMAGLGIESYAGSSGRVFPIGMKASPLLRRWLARLG HHCCCCHHHHHHHHHHCCHHHHHHHHHHCCHHHCCCCCCCEEEECCCCCHHHHHHHHHHC EGGATLHTRHRWTGWDAAGALVFDTPDGEMRVAADATILALGGASWSRLGSDGAWADILA CCCCEEEECCCCCCCCCCCEEEEECCCCCEEEECCEEEEEECCCCHHHCCCCCCHHHHHH ARGVAIEPFAPSNCGFMVDWSARLLAAHEGAPIKSVSLSAGGKTQRGDFVITRAGIESGA HCCEEECCCCCCCCCEEEECCCEEEEECCCCCCEEEEECCCCCCCCCCEEEEECCCCCCC VYPLSAALRQELAGRGATTLLIDLLPDTDEAALAARLTGANAKDSVSNRLRKAARLDATK CCHHHHHHHHHHHCCCCEEEEEEECCCCCHHHHHEEECCCCCHHHHHHHHHHHHHCCHHH IALLNEVTQGGAPKDPAALARLLKALPLMLTGTAPMDTAISTAGGVAWDALDNHLMLKAV HHHHHHHHCCCCCCCHHHHHHHHHHCCEEEECCCCCHHHHHHCCCEEEHHCCCCEEEEEC PDTYCVGEMVAWDAPTGGYLLTACLAMGRGVGSAGGN CCCHHCCCEEEECCCCCHHHHHHHHHHCCCCCCCCCC >Mature Secondary Structure MKQVAIIGAGPAGLMAAEAALERGARVAIYDAMPSPARKFLMAGKSGLNITHSEDESLFR CCEEEEEECCCHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHCCCCCCCEECCCHHHHHH SRYTAPDARLAAMVAAFGPAEITAWMAGLGIESYAGSSGRVFPIGMKASPLLRRWLARLG HHCCCCHHHHHHHHHHCCHHHHHHHHHHCCHHHCCCCCCCEEEECCCCCHHHHHHHHHHC EGGATLHTRHRWTGWDAAGALVFDTPDGEMRVAADATILALGGASWSRLGSDGAWADILA CCCCEEEECCCCCCCCCCCEEEEECCCCCEEEECCEEEEEECCCCHHHCCCCCCHHHHHH ARGVAIEPFAPSNCGFMVDWSARLLAAHEGAPIKSVSLSAGGKTQRGDFVITRAGIESGA HCCEEECCCCCCCCCEEEECCCEEEEECCCCCCEEEEECCCCCCCCCCEEEEECCCCCCC VYPLSAALRQELAGRGATTLLIDLLPDTDEAALAARLTGANAKDSVSNRLRKAARLDATK CCHHHHHHHHHHHCCCCEEEEEEECCCCCHHHHHEEECCCCCHHHHHHHHHHHHHCCHHH IALLNEVTQGGAPKDPAALARLLKALPLMLTGTAPMDTAISTAGGVAWDALDNHLMLKAV HHHHHHHHCCCCCCCHHHHHHHHHHCCEEEECCCCCHHHHHHCCCEEEHHCCCCEEEEEC PDTYCVGEMVAWDAPTGGYLLTACLAMGRGVGSAGGN CCCHHCCCEEEECCCCCHHHHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 9387221; 9384377 [H]