| Definition | Hyphomonas neptunium ATCC 15444 chromosome, complete genome. |
|---|---|
| Accession | NC_008358 |
| Length | 3,705,021 |
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The map label for this gene is fcuA [H]
Identifier: 114798388
GI number: 114798388
Start: 2258935
End: 2261115
Strand: Reverse
Name: fcuA [H]
Synonym: HNE_2174
Alternate gene names: 114798388
Gene position: 2261115-2258935 (Counterclockwise)
Preceding gene: 114797369
Following gene: 114799735
Centisome position: 61.03
GC content: 61.67
Gene sequence:
>2181_bases ATGAAGCCGGTCATCTGGAAAACACTCGTCACTCAAACCGCGTTTTGCGCTCTCGCAGCCGCAGCACTCGCGCAGGAAGC GCCGCCATCCGATCAGGAGCGTGTGCTGGAAACAGTGATTGTGACGGGCAACGGGTCTCAGGTCGAGCTGCCGGACGCTT ATGCCGGCGGCCAGGTTGCGCGCGGCGGACGGGCAGGGCTTCTGGGTAATCTGGATTTTCTGGACGCGCCCTTTTCCGGC ACCGCCTACACAGCCGACCTCGTCAGCGCGCAGCAATCGGAAAGCGTCGGCGACGTTTTGCAGAACGACCCTGTTGTTCG TGTGGCCAAAGGATTTGGCAATTTCCAGGAGGTCTATGTCATCCGCGGTTTCCCGGTCTATTCCGATGACGTCACTTTAA ACGGCGTATTCGGCATTCTGCCGCGCCAGTTCGTGGCGGCCGAATTGCTAGAGCGAGTTGAGGTGTTTCGCGGGGCAAAC GCCTTCGTCAATGGCGCGGCGCCCGGTGGCAGCGGTGTGGGTGGGTCGATCAACCTTGTTCCCAAACGCGCGCCGCAGGA TGGCATCCGCCGCGTCACCGCTGGATATGAAAGCGAAGGCCAGGCCTTCGGCGCGCTGGATATGGGCCAGCGTTTCGGCG CGGATGAGGCTTGGGGCGCGCGCTTCAACGCGGTGCTCCGCGACGGGGAGACGTCCGTGACGGATCAGTCCCGCAGCTTG ACGGCGCTGTCGCTCGGAACGGACTATGCGGGCGACCGCTTCCGCTTCACGGCCGATGTCGGCTATCAGGACAACCGGAT CGATGCGCCGCGTCCGCAGGTCTCGCCGCTGGCTGGCGTACCCGAGGCGCCCGACGCTGACACCAACTTCGCCCAGCCCT GGACGTATACGGACGAGCAACAGCTTTTCGGCGTCGTGCGCGGCGAATATGATGTGACAGATGCTGTCACCGTTTGGGCA GCAGCCGGCGCCCGGCAGGGCGAAGAAGCCAACGTATTGGCAAACCCCAATGCCGCTGCCGATGGCAGCATGACCGCTTA CCGGTTCGATAATACGCGTGAGGATGAAGTATTCTCCGCCGATGCGGGCGTGCGCGCCGAATTCCCGACCGGCCCGATCG GCCACCGGGTGGTCGTCTCCGCCACGTCGACCCAGCTTGAGTCTAAAAATGCCTACGCCTTCTCGAGCTTCTCAGCGTCG TTTGCCACAGACCTCTACAACCCCGTGGCGGCGGCGCCACCGGCGGCTGACTTCTTCATCGGCGGTGATCTGGGCGATCC CCTGAAAACCGAAGCCGCGCGCACCCGGTCGATTGCCGTCGCCGACACGCTGTCTTTCCTCGATGGCCGCCTGCTGGCGA CACTGGGTCTGCGCCATCAGGAGATCGAGACGGCTTCCTATGACTATAATTCCGGCGCCGCACTTTCACGCTATGAGGAT AGCAAGGTAACGCCGGCCGTGGGGCTCGTCTGGAAAGCCAGCGACCGCATGTCCCTGTTTGGCAACTACGCCGAAAGCCT TCAGCCGGGCGCCATAGCGCCGTCAACCAGCGGCGGCACGGTGATCCTCAATGCGGGTGAAGTGCTCGAGCCGTTTACCG GCGAACAGATGGAAGCGGGTATCAAATATGATTCCGGAAGCTTCGGCATGACCGCCAGCGTTTTCCAGCTCACCCGCCCG AACGCCATTGTTGTGGATCAGGTTTTCCAGGCTTCCGGTGAGCAGGAAAATCAGGGGGTCGAGCTGACGGTGTTCGGAGA GCCGGTCGAATCCGTTCGTTTGATCGGCGGCCTGACGCTGATCGATGCGGAGTTCTCCAAAACACAAGGCGGCGTGAACG AGGGCAACACCGTGATCGGCGTTCCGGAGGTTCAGGCAAACATCAACGCCGAATGGGATGTGCCCGGCATTGAGGGCTTA GCGGTGGATGGCCGTGTTACCTATACCGGCGAGCAATATGTAAACGAGACGAATACGGTAGATCTCGATAGCTGGGCCAG GCTTGATTTCGGCGTCCGCTATGCGCTCCAGGTTGCGCAGCAGGATGTGATGTTGCGGGCCCGGATTGAGAATGTCTCGG ATGAAGCGTATTGGGCCTCTACGGGCGGCTTCCCCGGTGCCAATTATCTTATTCTTGGCAATCCGCGGACCTTTACGGTT TCGGCCTCCGTCGATTTCTAG
Upstream 100 bases:
>100_bases ATCATCCAGACGCATGCATTAAAATGTGAGCATCCCCCACCCTTGTATTGCAAATGAGTTGCAATTACAGACGGGATTCT ACCAATTGGGAACCTCACAC
Downstream 100 bases:
>100_bases AGGAGACGGCATTGAAGGCATCGACGATCCGCGCATGGAGCTGGGTCCACAAATGGACCAGCCTGCTGTGTACGGTATTC CTGCTCATGCTCTGCGTGAC
Product: TonB-dependent receptor family protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 726; Mature: 726
Protein sequence:
>726_residues MKPVIWKTLVTQTAFCALAAAALAQEAPPSDQERVLETVIVTGNGSQVELPDAYAGGQVARGGRAGLLGNLDFLDAPFSG TAYTADLVSAQQSESVGDVLQNDPVVRVAKGFGNFQEVYVIRGFPVYSDDVTLNGVFGILPRQFVAAELLERVEVFRGAN AFVNGAAPGGSGVGGSINLVPKRAPQDGIRRVTAGYESEGQAFGALDMGQRFGADEAWGARFNAVLRDGETSVTDQSRSL TALSLGTDYAGDRFRFTADVGYQDNRIDAPRPQVSPLAGVPEAPDADTNFAQPWTYTDEQQLFGVVRGEYDVTDAVTVWA AAGARQGEEANVLANPNAAADGSMTAYRFDNTREDEVFSADAGVRAEFPTGPIGHRVVVSATSTQLESKNAYAFSSFSAS FATDLYNPVAAAPPAADFFIGGDLGDPLKTEAARTRSIAVADTLSFLDGRLLATLGLRHQEIETASYDYNSGAALSRYED SKVTPAVGLVWKASDRMSLFGNYAESLQPGAIAPSTSGGTVILNAGEVLEPFTGEQMEAGIKYDSGSFGMTASVFQLTRP NAIVVDQVFQASGEQENQGVELTVFGEPVESVRLIGGLTLIDAEFSKTQGGVNEGNTVIGVPEVQANINAEWDVPGIEGL AVDGRVTYTGEQYVNETNTVDLDSWARLDFGVRYALQVAQQDVMLRARIENVSDEAYWASTGGFPGANYLILGNPRTFTV SASVDF
Sequences:
>Translated_726_residues MKPVIWKTLVTQTAFCALAAAALAQEAPPSDQERVLETVIVTGNGSQVELPDAYAGGQVARGGRAGLLGNLDFLDAPFSG TAYTADLVSAQQSESVGDVLQNDPVVRVAKGFGNFQEVYVIRGFPVYSDDVTLNGVFGILPRQFVAAELLERVEVFRGAN AFVNGAAPGGSGVGGSINLVPKRAPQDGIRRVTAGYESEGQAFGALDMGQRFGADEAWGARFNAVLRDGETSVTDQSRSL TALSLGTDYAGDRFRFTADVGYQDNRIDAPRPQVSPLAGVPEAPDADTNFAQPWTYTDEQQLFGVVRGEYDVTDAVTVWA AAGARQGEEANVLANPNAAADGSMTAYRFDNTREDEVFSADAGVRAEFPTGPIGHRVVVSATSTQLESKNAYAFSSFSAS FATDLYNPVAAAPPAADFFIGGDLGDPLKTEAARTRSIAVADTLSFLDGRLLATLGLRHQEIETASYDYNSGAALSRYED SKVTPAVGLVWKASDRMSLFGNYAESLQPGAIAPSTSGGTVILNAGEVLEPFTGEQMEAGIKYDSGSFGMTASVFQLTRP NAIVVDQVFQASGEQENQGVELTVFGEPVESVRLIGGLTLIDAEFSKTQGGVNEGNTVIGVPEVQANINAEWDVPGIEGL AVDGRVTYTGEQYVNETNTVDLDSWARLDFGVRYALQVAQQDVMLRARIENVSDEAYWASTGGFPGANYLILGNPRTFTV SASVDF >Mature_726_residues MKPVIWKTLVTQTAFCALAAAALAQEAPPSDQERVLETVIVTGNGSQVELPDAYAGGQVARGGRAGLLGNLDFLDAPFSG TAYTADLVSAQQSESVGDVLQNDPVVRVAKGFGNFQEVYVIRGFPVYSDDVTLNGVFGILPRQFVAAELLERVEVFRGAN AFVNGAAPGGSGVGGSINLVPKRAPQDGIRRVTAGYESEGQAFGALDMGQRFGADEAWGARFNAVLRDGETSVTDQSRSL TALSLGTDYAGDRFRFTADVGYQDNRIDAPRPQVSPLAGVPEAPDADTNFAQPWTYTDEQQLFGVVRGEYDVTDAVTVWA AAGARQGEEANVLANPNAAADGSMTAYRFDNTREDEVFSADAGVRAEFPTGPIGHRVVVSATSTQLESKNAYAFSSFSAS FATDLYNPVAAAPPAADFFIGGDLGDPLKTEAARTRSIAVADTLSFLDGRLLATLGLRHQEIETASYDYNSGAALSRYED SKVTPAVGLVWKASDRMSLFGNYAESLQPGAIAPSTSGGTVILNAGEVLEPFTGEQMEAGIKYDSGSFGMTASVFQLTRP NAIVVDQVFQASGEQENQGVELTVFGEPVESVRLIGGLTLIDAEFSKTQGGVNEGNTVIGVPEVQANINAEWDVPGIEGL AVDGRVTYTGEQYVNETNTVDLDSWARLDFGVRYALQVAQQDVMLRARIENVSDEAYWASTGGFPGANYLILGNPRTFTV SASVDF
Specific function: Receptor for the hydroxamate siderophore, ferrichrome. Binds also to most other ferrichrome derivatives except enantio ferrichrome and ferric rhodotorulate [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell outer membrane [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the tonB-dependent receptor family [H]
Homologues:
Organism=Escherichia coli, GI1787344, Length=768, Percent_Identity=22.265625, Blast_Score=81, Evalue=2e-16, Organism=Escherichia coli, GI1786344, Length=370, Percent_Identity=25.9459459459459, Blast_Score=80, Evalue=6e-16,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR012910 - InterPro: IPR000531 - InterPro: IPR010916 - InterPro: IPR010917 - InterPro: IPR010105 [H]
Pfam domain/function: PF07715 Plug; PF00593 TonB_dep_Rec [H]
EC number: NA
Molecular weight: Translated: 76987; Mature: 76987
Theoretical pI: Translated: 4.09; Mature: 4.09
Prosite motif: PS00430 TONB_DEPENDENT_REC_1 ; PS01156 TONB_DEPENDENT_REC_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.1 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 1.1 %Cys+Met (Translated Protein) 0.1 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKPVIWKTLVTQTAFCALAAAALAQEAPPSDQERVLETVIVTGNGSQVELPDAYAGGQVA CCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHEEEEEEEECCCCEEECCCCCCCCCCC RGGRAGLLGNLDFLDAPFSGTAYTADLVSAQQSESVGDVLQNDPVVRVAKGFGNFQEVYV CCCCCCEEECCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCEEEEE IRGFPVYSDDVTLNGVFGILPRQFVAAELLERVEVFRGANAFVNGAAPGGSGVGGSINLV EECCEEECCCEEECCHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCCCCCEEEEE PKRAPQDGIRRVTAGYESEGQAFGALDMGQRFGADEAWGARFNAVLRDGETSVTDQSRSL ECCCCHHHHHHHHCCCCCCCCEECCHHHHHHCCCCCCCCCCEEEEEECCCCCCCCCCCCE TALSLGTDYAGDRFRFTADVGYQDNRIDAPRPQVSPLAGVPEAPDADTNFAQPWTYTDEQ EEEECCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHH QLFGVVRGEYDVTDAVTVWAAAGARQGEEANVLANPNAAADGSMTAYRFDNTREDEVFSA HHHHHHCCCCCCHHHHHHHHHCCCCCCCCCEEEECCCCCCCCCEEEEECCCCCCCCEEEC DAGVRAEFPTGPIGHRVVVSATSTQLESKNAYAFSSFSASFATDLYNPVAAAPPAADFFI CCCCEEECCCCCCCCEEEEEECCHHCCCCCCEEEECCCHHHHHHHCCCCCCCCCCCCEEE GGDLGDPLKTEAARTRSIAVADTLSFLDGRLLATLGLRHQEIETASYDYNSGAALSRYED ECCCCCCHHHHHHHHCEEEHHHHHHHHCCHHHHHHCCCHHHCCCCCCCCCCCCEEEECCC SKVTPAVGLVWKASDRMSLFGNYAESLQPGAIAPSTSGGTVILNAGEVLEPFTGEQMEAG CCCCCEEEEEEECCCCHHHHHHHHHHCCCCCCCCCCCCCEEEEECCCCCCCCCCCHHHCC IKYDSGSFGMTASVFQLTRPNAIVVDQVFQASGEQENQGVELTVFGEPVESVRLIGGLTL EEECCCCCCCEEEEEEECCCCEEEEHHHHHCCCCCCCCCEEEEEECCCHHHHHHHCCEEE IDAEFSKTQGGVNEGNTVIGVPEVQANINAEWDVPGIEGLAVDGRVTYTGEQYVNETNTV EECCHHHCCCCCCCCCEEEECCCEEECCCCEECCCCCCEEEECCEEEECCHHHCCCCCCE DLDSWARLDFGVRYALQVAQQDVMLRARIENVSDEAYWASTGGFPGANYLILGNPRTFTV ECCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCEEEECCCEEEEE SASVDF EEECCC >Mature Secondary Structure MKPVIWKTLVTQTAFCALAAAALAQEAPPSDQERVLETVIVTGNGSQVELPDAYAGGQVA CCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHEEEEEEEECCCCEEECCCCCCCCCCC RGGRAGLLGNLDFLDAPFSGTAYTADLVSAQQSESVGDVLQNDPVVRVAKGFGNFQEVYV CCCCCCEEECCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCEEEEE IRGFPVYSDDVTLNGVFGILPRQFVAAELLERVEVFRGANAFVNGAAPGGSGVGGSINLV EECCEEECCCEEECCHHHHHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCCCCCEEEEE PKRAPQDGIRRVTAGYESEGQAFGALDMGQRFGADEAWGARFNAVLRDGETSVTDQSRSL ECCCCHHHHHHHHCCCCCCCCEECCHHHHHHCCCCCCCCCCEEEEEECCCCCCCCCCCCE TALSLGTDYAGDRFRFTADVGYQDNRIDAPRPQVSPLAGVPEAPDADTNFAQPWTYTDEQ EEEECCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHH QLFGVVRGEYDVTDAVTVWAAAGARQGEEANVLANPNAAADGSMTAYRFDNTREDEVFSA HHHHHHCCCCCCHHHHHHHHHCCCCCCCCCEEEECCCCCCCCCEEEEECCCCCCCCEEEC DAGVRAEFPTGPIGHRVVVSATSTQLESKNAYAFSSFSASFATDLYNPVAAAPPAADFFI CCCCEEECCCCCCCCEEEEEECCHHCCCCCCEEEECCCHHHHHHHCCCCCCCCCCCCEEE GGDLGDPLKTEAARTRSIAVADTLSFLDGRLLATLGLRHQEIETASYDYNSGAALSRYED ECCCCCCHHHHHHHHCEEEHHHHHHHHCCHHHHHHCCCHHHCCCCCCCCCCCCEEEECCC SKVTPAVGLVWKASDRMSLFGNYAESLQPGAIAPSTSGGTVILNAGEVLEPFTGEQMEAG CCCCCEEEEEEECCCCHHHHHHHHHHCCCCCCCCCCCCCEEEEECCCCCCCCCCCHHHCC IKYDSGSFGMTASVFQLTRPNAIVVDQVFQASGEQENQGVELTVFGEPVESVRLIGGLTL EEECCCCCCCEEEEEEECCCCEEEEHHHHHCCCCCCCCCEEEEEECCCHHHHHHHCCEEE IDAEFSKTQGGVNEGNTVIGVPEVQANINAEWDVPGIEGLAVDGRVTYTGEQYVNETNTV EECCHHHCCCCCCCCCEEEECCCEEECCCCEECCCCCCEEEECCEEEECCHHHCCCCCCE DLDSWARLDFGVRYALQVAQQDVMLRARIENVSDEAYWASTGGFPGANYLILGNPRTFTV ECCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCEEEECCCEEEEE SASVDF EEECCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 8384682 [H]