| Definition | Hyphomonas neptunium ATCC 15444 chromosome, complete genome. |
|---|---|
| Accession | NC_008358 |
| Length | 3,705,021 |
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The map label for this gene is 114798385
Identifier: 114798385
GI number: 114798385
Start: 1509436
End: 1510770
Strand: Reverse
Name: 114798385
Synonym: HNE_1482
Alternate gene names: NA
Gene position: 1510770-1509436 (Counterclockwise)
Preceding gene: 114797834
Following gene: 114798855
Centisome position: 40.78
GC content: 58.43
Gene sequence:
>1335_bases ATGAGTGACAACACATCTGGCTCTAAATCGGCTGCGGGCTTGCGCGCCGCTGCGAGTACGGACGAAGGCGCTTTATTCCC GACAGCCGAACGCGCAGGCAAATTCAATCAAAGCTGCTTCTGCATCACACTGGACCGCGAAGCGCTTGCGTTAGCCATGC GCTCAGCAGCCGGCGACAGCGCGTTCTACGATGTCCACATTGCCAGCCGCCCGCATCTCTTTTCGGGCGTTCCGGTGTTC CTGCCAGAAGCAGATCGCGCGGCAATGATGGGAATCGTGGGAGCCATTGAGGCGACCGCCCGCACCAGCGCCTATATCAA AACGGTTATGGATTGGGCGCCCGAGATATCGCGGCACGATTTTGGTCCGCGCGGAGTCCTGATGGGCTATGACTTTCACC TTGGCAGCGGTCCGCCTCGCCTCATCGAGATCAACACCAATGCCGGCGGCGCTTTTCTGAACGCTTTTGGCGCACGCGCG CAGCTTGCCTGTTGTGACGCGGTCGAGCCAGTCATCCGCAGCTTGAATACTGGCACATTTGATCCGTCGGTCATCGGGAT GTTCGAAGCCGAATGGCAAAGCCAGCGTACTTCTATCCGTCCCAGGATGGTTGCTATTCTGGATGACGCCCCTGAGACGC AGTATCTTTATCCCGAGTTCCTGCTGGCCGAGCAGCTGCTGGAGGCGTCCAGTATTGATGCAATGGTCGCGGACCCATCC GAATTGACTCATGTCGGGGGAAAACTCATCGCACGCGAACGGGAAATTGACCTCGTCTACAACAGGCTTGTGGATTTCAG CCTGTCGGAACCGCGGCACGCGGCTTTGCGTGAAGCCTACCTGACAGGCGCCGTAGTCGTCACGCCTAACCCTCACAATC ACGCCCTGTTTGCGGACAAACGAAATCTTGCTGTGCTCTCCGATCCGGAATTGCTCCGGAGCTGGGAGATTTCGCCGGCC AATTTGAGCGCATTGTCTGCAATTCCACGTTCAGTCTCTGTCACGCCAGAGAACGCCGACGATCTCTGGGCGAGACGCAA GCGCCTGTTCTTCAAGCCCGTATCGGGACATGGCGGGAAGGCCGTCTACCGGGGTGATAAGCTCACACGGTCAGTGTGGG AGGCGATTCTGAAGGCAGATTATATTGCACAGGACCTTGTTGCGCCCGGCGAACGGGAGATCATGCTCGACGGCGCGGCA CACACACTCAAGACCGATGTGCGGCTCTATACCTATGACGGGGTCCTCCTGCTCGCGGCTGCGCGCCTTTACCGAGGACA GACAACCAACTTCAGGACACCGGGAGGCGGCTTTGCACCAGTGTTTTTCATATGA
Upstream 100 bases:
>100_bases CTGTCGTGATAGCGTGGAGCCATGAGGACCTGGGCTCGCGGGTAAGAGCCGGCGACCTTGAACGTTACTGAAATCTCAGC GTGCCTAAATTGAGTGGAAT
Downstream 100 bases:
>100_bases ACTGCGCCTTCTTCGGATTTGGACATCGCAATAATCCGATCGCCGCCGGCAGCGCGCCTCGTCTTAAATTCTGCAGACCC TGTCTTCTGCTTCTTTCATC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 444; Mature: 443
Protein sequence:
>444_residues MSDNTSGSKSAAGLRAAASTDEGALFPTAERAGKFNQSCFCITLDREALALAMRSAAGDSAFYDVHIASRPHLFSGVPVF LPEADRAAMMGIVGAIEATARTSAYIKTVMDWAPEISRHDFGPRGVLMGYDFHLGSGPPRLIEINTNAGGAFLNAFGARA QLACCDAVEPVIRSLNTGTFDPSVIGMFEAEWQSQRTSIRPRMVAILDDAPETQYLYPEFLLAEQLLEASSIDAMVADPS ELTHVGGKLIAREREIDLVYNRLVDFSLSEPRHAALREAYLTGAVVVTPNPHNHALFADKRNLAVLSDPELLRSWEISPA NLSALSAIPRSVSVTPENADDLWARRKRLFFKPVSGHGGKAVYRGDKLTRSVWEAILKADYIAQDLVAPGEREIMLDGAA HTLKTDVRLYTYDGVLLLAAARLYRGQTTNFRTPGGGFAPVFFI
Sequences:
>Translated_444_residues MSDNTSGSKSAAGLRAAASTDEGALFPTAERAGKFNQSCFCITLDREALALAMRSAAGDSAFYDVHIASRPHLFSGVPVF LPEADRAAMMGIVGAIEATARTSAYIKTVMDWAPEISRHDFGPRGVLMGYDFHLGSGPPRLIEINTNAGGAFLNAFGARA QLACCDAVEPVIRSLNTGTFDPSVIGMFEAEWQSQRTSIRPRMVAILDDAPETQYLYPEFLLAEQLLEASSIDAMVADPS ELTHVGGKLIAREREIDLVYNRLVDFSLSEPRHAALREAYLTGAVVVTPNPHNHALFADKRNLAVLSDPELLRSWEISPA NLSALSAIPRSVSVTPENADDLWARRKRLFFKPVSGHGGKAVYRGDKLTRSVWEAILKADYIAQDLVAPGEREIMLDGAA HTLKTDVRLYTYDGVLLLAAARLYRGQTTNFRTPGGGFAPVFFI >Mature_443_residues SDNTSGSKSAAGLRAAASTDEGALFPTAERAGKFNQSCFCITLDREALALAMRSAAGDSAFYDVHIASRPHLFSGVPVFL PEADRAAMMGIVGAIEATARTSAYIKTVMDWAPEISRHDFGPRGVLMGYDFHLGSGPPRLIEINTNAGGAFLNAFGARAQ LACCDAVEPVIRSLNTGTFDPSVIGMFEAEWQSQRTSIRPRMVAILDDAPETQYLYPEFLLAEQLLEASSIDAMVADPSE LTHVGGKLIAREREIDLVYNRLVDFSLSEPRHAALREAYLTGAVVVTPNPHNHALFADKRNLAVLSDPELLRSWEISPAN LSALSAIPRSVSVTPENADDLWARRKRLFFKPVSGHGGKAVYRGDKLTRSVWEAILKADYIAQDLVAPGEREIMLDGAAH TLKTDVRLYTYDGVLLLAAARLYRGQTTNFRTPGGGFAPVFFI
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 48261; Mature: 48130
Theoretical pI: Translated: 6.02; Mature: 6.02
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSDNTSGSKSAAGLRAAASTDEGALFPTAERAGKFNQSCFCITLDREALALAMRSAAGDS CCCCCCCCCHHCCCEEECCCCCCCCCCCHHHCCCCCCCEEEEEECHHHHHHHHHHCCCCC AFYDVHIASRPHLFSGVPVFLPEADRAAMMGIVGAIEATARTSAYIKTVMDWAPEISRHD EEEEEEECCCCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCC FGPRGVLMGYDFHLGSGPPRLIEINTNAGGAFLNAFGARAQLACCDAVEPVIRSLNTGTF CCCCEEEEEEEEECCCCCCEEEEEECCCCCHHHHHHCCCCEEHHHHHHHHHHHHCCCCCC DPSVIGMFEAEWQSQRTSIRPRMVAILDDAPETQYLYPEFLLAEQLLEASSIDAMVADPS CCCEEEEEHHHHHHHHHCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHCCCCEEECCHH ELTHVGGKLIAREREIDLVYNRLVDFSLSEPRHAALREAYLTGAVVVTPNPHNHALFADK HHHHHCHHHHCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCEEEECCCCCCCEEEECC RNLAVLSDPELLRSWEISPANLSALSAIPRSVSVTPENADDLWARRKRLFFKPVSGHGGK CCEEEECCHHHHHHCCCCCCCHHHHHHCCCCEEECCCCHHHHHHHHHHHEEEECCCCCCC AVYRGDKLTRSVWEAILKADYIAQDLVAPGEREIMLDGAAHTLKTDVRLYTYDGVLLLAA EEEECCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCEEECCEEEEEECCHHHHHH ARLYRGQTTNFRTPGGGFAPVFFI HHHHCCCCCCCCCCCCCCCCEEEC >Mature Secondary Structure SDNTSGSKSAAGLRAAASTDEGALFPTAERAGKFNQSCFCITLDREALALAMRSAAGDS CCCCCCCCHHCCCEEECCCCCCCCCCCHHHCCCCCCCEEEEEECHHHHHHHHHHCCCCC AFYDVHIASRPHLFSGVPVFLPEADRAAMMGIVGAIEATARTSAYIKTVMDWAPEISRHD EEEEEEECCCCCCCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCC FGPRGVLMGYDFHLGSGPPRLIEINTNAGGAFLNAFGARAQLACCDAVEPVIRSLNTGTF CCCCEEEEEEEEECCCCCCEEEEEECCCCCHHHHHHCCCCEEHHHHHHHHHHHHCCCCCC DPSVIGMFEAEWQSQRTSIRPRMVAILDDAPETQYLYPEFLLAEQLLEASSIDAMVADPS CCCEEEEEHHHHHHHHHCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHCCCCEEECCHH ELTHVGGKLIAREREIDLVYNRLVDFSLSEPRHAALREAYLTGAVVVTPNPHNHALFADK HHHHHCHHHHCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHCCEEEECCCCCCCEEEECC RNLAVLSDPELLRSWEISPANLSALSAIPRSVSVTPENADDLWARRKRLFFKPVSGHGGK CCEEEECCHHHHHHCCCCCCCHHHHHHCCCCEEECCCCHHHHHHHHHHHEEEECCCCCCC AVYRGDKLTRSVWEAILKADYIAQDLVAPGEREIMLDGAAHTLKTDVRLYTYDGVLLLAA EEEECCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCEEECCEEEEEECCHHHHHH ARLYRGQTTNFRTPGGGFAPVFFI HHHHCCCCCCCCCCCCCCCCEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA