Definition Hyphomonas neptunium ATCC 15444 chromosome, complete genome.
Accession NC_008358
Length 3,705,021

Click here to switch to the map view.

The map label for this gene is 114798373

Identifier: 114798373

GI number: 114798373

Start: 2064619

End: 2065332

Strand: Reverse

Name: 114798373

Synonym: HNE_1988

Alternate gene names: NA

Gene position: 2065332-2064619 (Counterclockwise)

Preceding gene: 114798053

Following gene: 114797711

Centisome position: 55.74

GC content: 56.86

Gene sequence:

>714_bases
ATGTCAGAGAATGAAAAGCCGGATTATGGCATCGTAGAAGTCCAGCCTCCCGCCAAGCAGGGACTGCTGGCCTGGCTGCG
TGCGCGGTTTGTGGCCGGCATGCTGATCGCCTTGCCGATTGTCGCGACATTCGTGATTCTGGAATTCCTGATCAACCTGA
TCGACAGCCGCGTTGTGCCGTTGCTGCCGCCGAGTCTGCGGCCAGAAACCTATCTCGATTACGCCGTGCCGGGCTTTGGA
CTGATCATCCTGATCCTGTTCCTGACACTGGTAGGCGCGGTTGCCACAAATTTCCTCGGCAAATTCTTTGTCGATCTGAC
AGACCGGGTCCTGACACGTGTTCCCGTCGTGCGGTCGGTCTACTCGGTGTTCAAGCAGATCCGCGATGTTTTCCAGAACA
ATACGGCGGGTCAGTACAAAGAAGTCGCGATGGTTGAATATCCACGCGAGGGAAGCTGGGTCATCGGATTTGTAGCAGGA
CCGATCAAGGGCGAGATGCGCCAGAGGCTGGGTGAGAATTTCATCGGTATCTTTGTGCCGACGACACCCAACCCGACATC
CGGATTCCTCCTCTACGTCGCCGAAGCCAAGATCGTGCGTCTGGACATGAGCGTTGAGGAAGGCGCGAAGATCATCTTCT
CTGGTGGCCTTGTGGTTCCGGACTATCCGTTACCCGGCCAGCCTCTTGCGCCGAACTCGAACCCCGCCAAATAG

Upstream 100 bases:

>100_bases
TATATCGGTTACGGTTCCCATCTTCGCCACAATTACGCGGAAGAAGGTGCGCGCCAAGCGGTAACGCTGAGGAAGGCCGC
AGCGTCATAGGGTCAGATTC

Downstream 100 bases:

>100_bases
CGGCTTCACGAGCCGGTTTCGGCGCCCTGCACCACGCGCGGCGTCAACAGTTCCCGCGCTATGCGCAGCGATTGCCAACG
CTCACCCTTGCGGTCCGGGT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 237; Mature: 236

Protein sequence:

>237_residues
MSENEKPDYGIVEVQPPAKQGLLAWLRARFVAGMLIALPIVATFVILEFLINLIDSRVVPLLPPSLRPETYLDYAVPGFG
LIILILFLTLVGAVATNFLGKFFVDLTDRVLTRVPVVRSVYSVFKQIRDVFQNNTAGQYKEVAMVEYPREGSWVIGFVAG
PIKGEMRQRLGENFIGIFVPTTPNPTSGFLLYVAEAKIVRLDMSVEEGAKIIFSGGLVVPDYPLPGQPLAPNSNPAK

Sequences:

>Translated_237_residues
MSENEKPDYGIVEVQPPAKQGLLAWLRARFVAGMLIALPIVATFVILEFLINLIDSRVVPLLPPSLRPETYLDYAVPGFG
LIILILFLTLVGAVATNFLGKFFVDLTDRVLTRVPVVRSVYSVFKQIRDVFQNNTAGQYKEVAMVEYPREGSWVIGFVAG
PIKGEMRQRLGENFIGIFVPTTPNPTSGFLLYVAEAKIVRLDMSVEEGAKIIFSGGLVVPDYPLPGQPLAPNSNPAK
>Mature_236_residues
SENEKPDYGIVEVQPPAKQGLLAWLRARFVAGMLIALPIVATFVILEFLINLIDSRVVPLLPPSLRPETYLDYAVPGFGL
IILILFLTLVGAVATNFLGKFFVDLTDRVLTRVPVVRSVYSVFKQIRDVFQNNTAGQYKEVAMVEYPREGSWVIGFVAGP
IKGEMRQRLGENFIGIFVPTTPNPTSGFLLYVAEAKIVRLDMSVEEGAKIIFSGGLVVPDYPLPGQPLAPNSNPAK

Specific function: Unknown

COG id: COG2928

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 26079; Mature: 25948

Theoretical pI: Translated: 6.95; Mature: 6.95

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
1.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSENEKPDYGIVEVQPPAKQGLLAWLRARFVAGMLIALPIVATFVILEFLINLIDSRVVP
CCCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
LLPPSLRPETYLDYAVPGFGLIILILFLTLVGAVATNFLGKFFVDLTDRVLTRVPVVRSV
CCCCCCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YSVFKQIRDVFQNNTAGQYKEVAMVEYPREGSWVIGFVAGPIKGEMRQRLGENFIGIFVP
HHHHHHHHHHHCCCCCCCHHHHHEEECCCCCCEEEEEEECCCCHHHHHHHCCCEEEEEEC
TTPNPTSGFLLYVAEAKIVRLDMSVEEGAKIIFSGGLVVPDYPLPGQPLAPNSNPAK
CCCCCCCCEEEEEECCEEEEEECCHHHCCEEEEECCEEECCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
SENEKPDYGIVEVQPPAKQGLLAWLRARFVAGMLIALPIVATFVILEFLINLIDSRVVP
CCCCCCCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
LLPPSLRPETYLDYAVPGFGLIILILFLTLVGAVATNFLGKFFVDLTDRVLTRVPVVRSV
CCCCCCCCCCHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
YSVFKQIRDVFQNNTAGQYKEVAMVEYPREGSWVIGFVAGPIKGEMRQRLGENFIGIFVP
HHHHHHHHHHHCCCCCCCHHHHHEEECCCCCCEEEEEEECCCCHHHHHHHCCCEEEEEEC
TTPNPTSGFLLYVAEAKIVRLDMSVEEGAKIIFSGGLVVPDYPLPGQPLAPNSNPAK
CCCCCCCCEEEEEECCEEEEEECCHHHCCEEEEECCEEECCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA