| Definition | Hyphomonas neptunium ATCC 15444 chromosome, complete genome. |
|---|---|
| Accession | NC_008358 |
| Length | 3,705,021 |
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The map label for this gene is fbpB2 [H]
Identifier: 114798364
GI number: 114798364
Start: 2853656
End: 2855221
Strand: Direct
Name: fbpB2 [H]
Synonym: HNE_2694
Alternate gene names: 114798364
Gene position: 2853656-2855221 (Clockwise)
Preceding gene: 114798060
Following gene: 114797566
Centisome position: 77.02
GC content: 69.35
Gene sequence:
>1566_bases ATGCCGGCGCTCGTCGCCGGCATCGTCATTGCTGTGCCCGTCGTCATGGTGCTGCTCGCCGGCCTGTTTGACGGCGCGGG CGACGCCTGGACCCACATTCGCGAAACCCTGCTCCTGCGCTATCTCGGCGGCACGCTGTCGGTTCTGGCACTGACCGGCG CGCTCTGCCTGCTGTTCGCCGTGCCATCGGCCTGGCTTGTCACCATGTTCCGCTTCCCGGGCCGCGCCGTCTTTGAATGG CTGCTGATCCTGCCGCTGGCCGCGCCGGGCTATGTGCTCGCCTATGCCTGGGCAGACCTTGCCGGCGTTGGCGGGCCGGT TCAGTCGGCCCTGCGCGAAGCCACCGGCTGGTCGGCGCGTGACTACTGGTTCCCCGACATCAACTCCCTGCCCGGCCTCG CCTTCGTACTGGCTTGCACGCTCTACCCCTACGTCTACCTCACCGCCCGTTCGGCCTTCGTCTCCCAGTCGGTCTGCGCG CTTGAGGCGGCCCGCAGCCTTGGCGCTGGCCCCGGCCGCAGCTTCTGGTCGGTCGCGCTGCCTGCGGCCCGCCCAGCCAT CGCCGCCGGCCTCGCCCTCGCCCTCATGGAAGCGGCGGCCGACTATGGCGCCGCCGAGTTCCTTGGCGTGCCCACGCTCA CCTTCGGCATCGTGCGTGCCTGGAAAAGCTTTGGTGAGCCGGCCGCCGCGGCCCGTCTTGCCTTTGTGCTGATCGGCTTG ATCGCGGTCCTGATCGTCACCGAGCGCTGGGGGCGGGGCCGCGCGGGCAGCCAGCAATCCTCCATCCGCTGGCGCCATGT TTCGCGCACGCAGTTGACCGGATTGTCCGCGATTGGCGCGAGTGTGTCCTGTCTTGTCCTGTTTCTGGCAGCCTTTGGCC TGCCTGTGGGACGCCTTGTCTGGCGCAGTGTCGAGACTGGCCCCGGCGCCGCGCCGATCTGGGACGCGCTCGGCAACTCC ATCATCCTCGCCGGTTCGGGCGCTGTCTTTGCCTTTATCCTCGCCCTGATGATCGTGCTGGCCGCCCGCGCCAAAGGCCC CGCCGCCTTCTTCGCCCGCGCCAGCGCCATCTCGGGCTATTCCATCCCCGGCGCCGTCCTTGCGCTCGGCGCCCTTGCAA TCATTGGCCTTTTGCCGCTGACACTCTCCGGCGGCGTTGCCCTCATCGCCCTCGCCTGGGTCTATGCCGCCCGCTTCACC GCCGCCGGCACCGAGCCGATGGCCGCCGCCCTCGCCCGCGCGCCCGCCTCCCTCTCCCACGCCGCCCGCAGCCTTGGCGC CAGCCCGTCCCGCCAGGCCTTTGAAGTTGACCTCCCCATCGCCCTTTCCGGTGCTGCGGTCGCCGCCCTCATCCTCTTCG TCGAGGCCTTGAAAGAACTCCCGGCTACCCTGATGTTGCGACCCTTCAACTGGGATACCCTGTCCGTGCGTGCCTATGCC TATGCCAGCGACGAGCGCCTCGCCGCCGCCGCGCTACCCTCGCTGCTGATCACCCTTGCGGGCCTTGTGCCGGTGATCCT CCTGTCCTGGCAGCTCTCGCGCTCCCGTCCCGGTGAAACCCAGTGA
Upstream 100 bases:
>100_bases TGAGCGAGCTGGGAACCCATCAGCCAGAGGCGCAGGCGATCTTTGATCGTGCGGGCTGGAACTGAAACAGGCCACCGCCG CCTTTCCACTCTCCAGACAG
Downstream 100 bases:
>100_bases GCGCTGCCCTTTCTGCCCATCAGGTGACCCGCCGCTATGGTGACCGCGCCGTCGTTGACGGGGTGAGCCTCACCCTGCCG CCCGGCCAGATCACAGCCCT
Product: ABC transporter permease
Products: ADP; phosphate; S2O32- [Cytoplasm]; SO42- [Cytoplasm] [C]
Alternate protein names: Iron(III)-transport system permease protein fbpB 2 [H]
Number of amino acids: Translated: 521; Mature: 520
Protein sequence:
>521_residues MPALVAGIVIAVPVVMVLLAGLFDGAGDAWTHIRETLLLRYLGGTLSVLALTGALCLLFAVPSAWLVTMFRFPGRAVFEW LLILPLAAPGYVLAYAWADLAGVGGPVQSALREATGWSARDYWFPDINSLPGLAFVLACTLYPYVYLTARSAFVSQSVCA LEAARSLGAGPGRSFWSVALPAARPAIAAGLALALMEAAADYGAAEFLGVPTLTFGIVRAWKSFGEPAAAARLAFVLIGL IAVLIVTERWGRGRAGSQQSSIRWRHVSRTQLTGLSAIGASVSCLVLFLAAFGLPVGRLVWRSVETGPGAAPIWDALGNS IILAGSGAVFAFILALMIVLAARAKGPAAFFARASAISGYSIPGAVLALGALAIIGLLPLTLSGGVALIALAWVYAARFT AAGTEPMAAALARAPASLSHAARSLGASPSRQAFEVDLPIALSGAAVAALILFVEALKELPATLMLRPFNWDTLSVRAYA YASDERLAAAALPSLLITLAGLVPVILLSWQLSRSRPGETQ
Sequences:
>Translated_521_residues MPALVAGIVIAVPVVMVLLAGLFDGAGDAWTHIRETLLLRYLGGTLSVLALTGALCLLFAVPSAWLVTMFRFPGRAVFEW LLILPLAAPGYVLAYAWADLAGVGGPVQSALREATGWSARDYWFPDINSLPGLAFVLACTLYPYVYLTARSAFVSQSVCA LEAARSLGAGPGRSFWSVALPAARPAIAAGLALALMEAAADYGAAEFLGVPTLTFGIVRAWKSFGEPAAAARLAFVLIGL IAVLIVTERWGRGRAGSQQSSIRWRHVSRTQLTGLSAIGASVSCLVLFLAAFGLPVGRLVWRSVETGPGAAPIWDALGNS IILAGSGAVFAFILALMIVLAARAKGPAAFFARASAISGYSIPGAVLALGALAIIGLLPLTLSGGVALIALAWVYAARFT AAGTEPMAAALARAPASLSHAARSLGASPSRQAFEVDLPIALSGAAVAALILFVEALKELPATLMLRPFNWDTLSVRAYA YASDERLAAAALPSLLITLAGLVPVILLSWQLSRSRPGETQ >Mature_520_residues PALVAGIVIAVPVVMVLLAGLFDGAGDAWTHIRETLLLRYLGGTLSVLALTGALCLLFAVPSAWLVTMFRFPGRAVFEWL LILPLAAPGYVLAYAWADLAGVGGPVQSALREATGWSARDYWFPDINSLPGLAFVLACTLYPYVYLTARSAFVSQSVCAL EAARSLGAGPGRSFWSVALPAARPAIAAGLALALMEAAADYGAAEFLGVPTLTFGIVRAWKSFGEPAAAARLAFVLIGLI AVLIVTERWGRGRAGSQQSSIRWRHVSRTQLTGLSAIGASVSCLVLFLAAFGLPVGRLVWRSVETGPGAAPIWDALGNSI ILAGSGAVFAFILALMIVLAARAKGPAAFFARASAISGYSIPGAVLALGALAIIGLLPLTLSGGVALIALAWVYAARFTA AGTEPMAAALARAPASLSHAARSLGASPSRQAFEVDLPIALSGAAVAALILFVEALKELPATLMLRPFNWDTLSVRAYAY ASDERLAAAALPSLLITLAGLVPVILLSWQLSRSRPGETQ
Specific function: Part of the ABC transporter complex fbpABC (TC 3.A.1.10.1) involved in Fe(3+) ions import. Probably responsible for the translocation of the substrate across the membrane [H]
COG id: COG1178
COG function: function code P; ABC-type Fe3+ transport system, permease component
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein (Probable) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 2 ABC transmembrane type-1 domains [H]
Homologues:
Organism=Escherichia coli, GI1788764, Length=183, Percent_Identity=30.6010928961749, Blast_Score=62, Evalue=7e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000515 [H]
Pfam domain/function: PF00528 BPD_transp_1 [H]
EC number: NA
Molecular weight: Translated: 54071; Mature: 53940
Theoretical pI: Translated: 9.79; Mature: 9.79
Prosite motif: PS50928 ABC_TM1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPALVAGIVIAVPVVMVLLAGLFDGAGDAWTHIRETLLLRYLGGTLSVLALTGALCLLFA CCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VPSAWLVTMFRFPGRAVFEWLLILPLAAPGYVLAYAWADLAGVGGPVQSALREATGWSAR HHHHHHHHHHHCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCC DYWFPDINSLPGLAFVLACTLYPYVYLTARSAFVSQSVCALEAARSLGAGPGRSFWSVAL CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHEEC PAARPAIAAGLALALMEAAADYGAAEFLGVPTLTFGIVRAWKSFGEPAAAARLAFVLIGL CCCCHHHHHHHHHHHHHHHHHCCCHHHHCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH IAVLIVTERWGRGRAGSQQSSIRWRHVSRTQLTGLSAIGASVSCLVLFLAAFGLPVGRLV HHHHHHHHCCCCCCCCCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH WRSVETGPGAAPIWDALGNSIILAGSGAVFAFILALMIVLAARAKGPAAFFARASAISGY HHHCCCCCCCCHHHHHCCCCEEEECCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCC SIPGAVLALGALAIIGLLPLTLSGGVALIALAWVYAARFTAAGTEPMAAALARAPASLSH CCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCHHHHH AARSLGASPSRQAFEVDLPIALSGAAVAALILFVEALKELPATLMLRPFNWDTLSVRAYA HHHHHCCCCCCCEEEECCCEEECHHHHHHHHHHHHHHHHCCHHEEEECCCCCEEEEEEEE YASDERLAAAALPSLLITLAGLVPVILLSWQLSRSRPGETQ ECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure PALVAGIVIAVPVVMVLLAGLFDGAGDAWTHIRETLLLRYLGGTLSVLALTGALCLLFA CHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH VPSAWLVTMFRFPGRAVFEWLLILPLAAPGYVLAYAWADLAGVGGPVQSALREATGWSAR HHHHHHHHHHHCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCC DYWFPDINSLPGLAFVLACTLYPYVYLTARSAFVSQSVCALEAARSLGAGPGRSFWSVAL CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHEEC PAARPAIAAGLALALMEAAADYGAAEFLGVPTLTFGIVRAWKSFGEPAAAARLAFVLIGL CCCCHHHHHHHHHHHHHHHHHCCCHHHHCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHH IAVLIVTERWGRGRAGSQQSSIRWRHVSRTQLTGLSAIGASVSCLVLFLAAFGLPVGRLV HHHHHHHHCCCCCCCCCCCCCCHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH WRSVETGPGAAPIWDALGNSIILAGSGAVFAFILALMIVLAARAKGPAAFFARASAISGY HHHCCCCCCCCHHHHHCCCCEEEECCCHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCC SIPGAVLALGALAIIGLLPLTLSGGVALIALAWVYAARFTAAGTEPMAAALARAPASLSH CCCHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHCCCCCHHHHHHHHCCHHHHH AARSLGASPSRQAFEVDLPIALSGAAVAALILFVEALKELPATLMLRPFNWDTLSVRAYA HHHHHCCCCCCCEEEECCCEEECHHHHHHHHHHHHHHHHCCHHEEEECCCCCEEEEEEEE YASDERLAAAALPSLLITLAGLVPVILLSWQLSRSRPGETQ ECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; S2O32- [Periplasm]; H2O; SO42- [Periplasm]; ATP [C]
Specific reaction: ATP + S2O32- [Periplasm] + H2O = ADP + phosphate + S2O32- [Cytoplasm] SO42- [Periplasm] + H2O + ATP = SO42- [Cytoplasm] + phosphate + ADP [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 7542800; 7927717 [H]