| Definition | Hyphomonas neptunium ATCC 15444 chromosome, complete genome. |
|---|---|
| Accession | NC_008358 |
| Length | 3,705,021 |
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The map label for this gene is bglS [H]
Identifier: 114798350
GI number: 114798350
Start: 2765490
End: 2766284
Strand: Direct
Name: bglS [H]
Synonym: HNE_2603
Alternate gene names: 114798350
Gene position: 2765490-2766284 (Clockwise)
Preceding gene: 114800291
Following gene: 114798983
Centisome position: 74.64
GC content: 59.87
Gene sequence:
>795_bases ATGTACTACCCCTGGACTGCGCCAAAGCCCTACACGCCCGACCTGCCCGAGCCCAAAGCGCCTGCTACACCGTTGAATTC TCAGGAATCCTTTCTGACGCGCCTGGAAACACCTGACGCAGACAGCATGCTGTACGCGTCCAACTATGACGTCAAAGACA GCCATTATGGCTGCCATTGGCGGGGCGAGAATGTCGAAAAGACCCCCAGCGGCGCCCTGCTGGCGATCCACCGCGTCAAA GGCGCGTCCCAACCCTGCACCGCCGCCGAAATGCAGACTGCCGGTCATTACAGCTATGGCCGCTATGAAGTGATCATGCG TCCGGCACGCGGATCAGGCCTGGTTTCGTCCTTCTTCACCTATACAGGCGGCTATTTTGGCGACCCCCATGATGAAATCG ACATCGAATTCCTGGGCAAGGACACAACCCGAATTCACTTCAACTATTTTCGCAAAGGCAAGACCGGCGCCGACGAGATC TTCGATCTTCCCTTCGATGCCGCCGATGCAGACCGCCTCTATGCGTTCGAATGGACGCCTGAGGGCATCACCTGGTTTGT CGAAGGCGTGCCCTATTACACCACGCCGGCAGAAGATTCCGGCCTGCCGGTTGCACCCGGACGGGTCTACATGAACGTGT GGGCGGGCGAACCCTGGATCGAGCAATGGACGGGCACGCCGACATACCGGTCCGGCGCAGGCGCCCATTACAGCTGCGTC TCATTCGTACCGCTGGGCCAAAAAGGCGCCGGATGCGGCGACGATTATACGCCGCCTGCCGTCCTCAGCCCTTGA
Upstream 100 bases:
>100_bases AGCTCTGACGCCCGCTCCCGCTCCATCGCCTTACACCGGCAAAGCGCCTCAGCAGATTGCCGCCGCCCTGCCCCAGGCGG CCCCGCGCACCTCCGGCACC
Downstream 100 bases:
>100_bases TATCGTTGATGATCTGCTCGCGGGCGATCGGCAGCAAACGCGCCATTTCTTCCCGGACCTGGGCCTCCGTGCGGGTCAGC CCGGCCTTTTCGAGATCGCC
Product: putative licheninase
Products: NA
Alternate protein names: 1,3-1,4-beta-D-glucan 4-glucanohydrolase; Endo-beta-1,3-1,4 glucanase; Lichenase [H]
Number of amino acids: Translated: 264; Mature: 264
Protein sequence:
>264_residues MYYPWTAPKPYTPDLPEPKAPATPLNSQESFLTRLETPDADSMLYASNYDVKDSHYGCHWRGENVEKTPSGALLAIHRVK GASQPCTAAEMQTAGHYSYGRYEVIMRPARGSGLVSSFFTYTGGYFGDPHDEIDIEFLGKDTTRIHFNYFRKGKTGADEI FDLPFDAADADRLYAFEWTPEGITWFVEGVPYYTTPAEDSGLPVAPGRVYMNVWAGEPWIEQWTGTPTYRSGAGAHYSCV SFVPLGQKGAGCGDDYTPPAVLSP
Sequences:
>Translated_264_residues MYYPWTAPKPYTPDLPEPKAPATPLNSQESFLTRLETPDADSMLYASNYDVKDSHYGCHWRGENVEKTPSGALLAIHRVK GASQPCTAAEMQTAGHYSYGRYEVIMRPARGSGLVSSFFTYTGGYFGDPHDEIDIEFLGKDTTRIHFNYFRKGKTGADEI FDLPFDAADADRLYAFEWTPEGITWFVEGVPYYTTPAEDSGLPVAPGRVYMNVWAGEPWIEQWTGTPTYRSGAGAHYSCV SFVPLGQKGAGCGDDYTPPAVLSP >Mature_264_residues MYYPWTAPKPYTPDLPEPKAPATPLNSQESFLTRLETPDADSMLYASNYDVKDSHYGCHWRGENVEKTPSGALLAIHRVK GASQPCTAAEMQTAGHYSYGRYEVIMRPARGSGLVSSFFTYTGGYFGDPHDEIDIEFLGKDTTRIHFNYFRKGKTGADEI FDLPFDAADADRLYAFEWTPEGITWFVEGVPYYTTPAEDSGLPVAPGRVYMNVWAGEPWIEQWTGTPTYRSGAGAHYSCV SFVPLGQKGAGCGDDYTPPAVLSP
Specific function: Unknown
COG id: COG2273
COG function: function code G; Beta-glucanase/Beta-glucan synthetase
Gene ontology:
Cell location: Secreted [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the glycosyl hydrolase 16 family [H]
Homologues:
Organism=Saccharomyces cerevisiae, GI6321628, Length=124, Percent_Identity=35.4838709677419, Blast_Score=73, Evalue=6e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008264 - InterPro: IPR008985 - InterPro: IPR013320 - InterPro: IPR000757 - InterPro: IPR008263 [H]
Pfam domain/function: PF00722 Glyco_hydro_16 [H]
EC number: =3.2.1.73 [H]
Molecular weight: Translated: 29234; Mature: 29234
Theoretical pI: Translated: 4.66; Mature: 4.66
Prosite motif: PS01034 GLYCOSYL_HYDROL_F16
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYYPWTAPKPYTPDLPEPKAPATPLNSQESFLTRLETPDADSMLYASNYDVKDSHYGCHW CCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCEEEECCCCCCCCCCCCEE RGENVEKTPSGALLAIHRVKGASQPCTAAEMQTAGHYSYGRYEVIMRPARGSGLVSSFFT ECCCCCCCCCCEEEEEEECCCCCCCCCHHHHHHCCCCCCCEEEEEEECCCCCCHHHHHHH YTGGYFGDPHDEIDIEFLGKDTTRIHFNYFRKGKTGADEIFDLPFDAADADRLYAFEWTP HCCCCCCCCCCCEEEEEECCCCEEEEEEEEECCCCCCHHHEECCCCCCCCCEEEEEEECC EGITWFVEGVPYYTTPAEDSGLPVAPGRVYMNVWAGEPWIEQWTGTPTYRSGAGAHYSCV CCEEEEECCCCEEECCCCCCCCCCCCCEEEEEEECCCCHHHHCCCCCCCCCCCCCCEEEE SFVPLGQKGAGCGDDYTPPAVLSP EEEECCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MYYPWTAPKPYTPDLPEPKAPATPLNSQESFLTRLETPDADSMLYASNYDVKDSHYGCHW CCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCEEEECCCCCCCCCCCCEE RGENVEKTPSGALLAIHRVKGASQPCTAAEMQTAGHYSYGRYEVIMRPARGSGLVSSFFT ECCCCCCCCCCEEEEEEECCCCCCCCCHHHHHHCCCCCCCEEEEEEECCCCCCHHHHHHH YTGGYFGDPHDEIDIEFLGKDTTRIHFNYFRKGKTGADEIFDLPFDAADADRLYAFEWTP HCCCCCCCCCCCEEEEEECCCCEEEEEEEEECCCCCCHHHEECCCCCCCCCEEEEEEECC EGITWFVEGVPYYTTPAEDSGLPVAPGRVYMNVWAGEPWIEQWTGTPTYRSGAGAHYSCV CCEEEEECCCCEEECCCCCCCCCCCCCEEEEEEECCCCHHHHCCCCCCCCCCCCCCEEEE SFVPLGQKGAGCGDDYTPPAVLSP EEEECCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 6087283; 8969509; 7704256; 9384377; 8606172 [H]