| Definition | Hyphomonas neptunium ATCC 15444 chromosome, complete genome. |
|---|---|
| Accession | NC_008358 |
| Length | 3,705,021 |
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The map label for this gene is 114798309
Identifier: 114798309
GI number: 114798309
Start: 3337776
End: 3339659
Strand: Direct
Name: 114798309
Synonym: HNE_3157
Alternate gene names: NA
Gene position: 3337776-3339659 (Clockwise)
Preceding gene: 114797718
Following gene: 114799776
Centisome position: 90.09
GC content: 67.89
Gene sequence:
>1884_bases ATGCTAGCCGTAACCGGACGCAGAACTGCGAGCCTTTTGCCGGCTGGGCTTTGCACAGCCCTTCTCATGGCTGTGCTCCC AGTTGCGTGCACCCCCCGCGCCGACCCTGAAGGCACCCCGCGCCGCGTGGCGCGCGAGATCGAGCAGACCCTGACAACCG TTGCCCAGAATGAGGTCACGCGGGACCCCGAGCTCGCCACCCGGCTGGGCCTGGCGCAGGCGGATGCGGGCTTTGCCTAC AACCGCCACCTGACAGACCGCTCGCAGGCCGCCTATGAGCGCGCCCGCCTGTCACGCCTGGAAACGCGCGACCTTCTGGT GCGCATTACCCGTCCGGCGAGAGGCAGCGCCCTCGCCCGCCACCTCGACACGCTGATTGCCGCCCATGAGACCGCCGAAA CCCTCTTCATGGGCGGGTATGGCGCCTCCGGGCTCGCAGCGTCCTACCCCTATGTCGCCGACCATACGCGCGGCGCGTAT CTTGATGTGCCCGACCTGCTCGCCCGGTTTCACCCGCTCCGGACGCCGGCCGATGCCCGCGCCTTTGCCGACCGGATGGC CCAGTTTGCCGACGCCATCGAGGACGACCGGCGGCGCTTGGAATCTGACGCCCGCGCCGGCGTGGTGCCCCCTGCGCCAG TACTGCGCAGAATGCAGGCGCTGGCCGCTACCGCAGCGGCCCAGCCGCCCGAGCTCAGCCCGCCTGTGGTCACCTTCGAG AACCTGACCCCCGGCATCCGAGACCTTGAACCCGCCGAACGGGACCGGCTGATCGCCCAGGTGCGCCGCCTCGCGGCCGA CCGCGTGCAGCCCGCCTATGCCGCCTTCGCTGATAGCTTGGGCACGCTCGCCAACACGGCGCCGGAACTGCCGGGCGCAT GGCAATTGCCCGAAGGCACAGAGTATTACGCCGCCGCCCTGAAAGCCTATACCGGCGACGATGCCGCCGCTGCGGGTCTG CATGAGCGCGGCAAGCTGGAAGTTGATGCGCTGCTGGCGGAAACCGGCCGCGCTCTGGCCGCGCTTGGCCTGGTAGAGGG CAGTGTTGGCGAACGCCTTGCGATCCTCGCCGCCCAGCCGGAGCAGATTTATCCTGATACGGAAGAAGGCCGCGCGGCGC TGATCGGGCGCATCCTGGCCCATACGGACCGGGCGGCCGCCGCCATTCCCGAACAGTTCGATTTTACCATGCCCGAACGG GCAGGCCTGCGCGCAGTGCCGCCCGAATTTGCCGCCTTTCTTCCGCCAGCCGCCTATCTGCCGCGCTCTCTCAGCGGCAG CACACCGGCACGGGTCGAGATCAATCTTGCCCGCATGAATGACTGGCCGGACTTTTCCCTGGCAGTCACCGCCTTCCATG AGCTTGTGCCCGGCCACCATCTGGAAAGCAGCGCCGCGCGCAGCGCCGCCGAGCTGCCTCTGGCCCGGCAGATGGTCTGG AATGTGGCCTATGGGGAAGGCTGGGCGTCTTACGCCGAAACCCTGGCAGACGAGCTGGGCCTGTATTCAAGCGACCCGCT CAGCCGTATCGGATACCTGCAATCCATGCTGCTGCGCGCCGCCGGGCTGGTGGCCGATACCGGCATTCACAATGAGCGCT GGACCCGCGATCAGGCGATTGCCTATCTGACTGAAACTGTCGGCCTCAGCCCTGAAAGAAGCGCTGACGAGGTGGACCGC TACACAGTTCGCCCCGGATATGCCGCTGCCTACTGGCTCGGGCGGGAGCGCATCCTCGATCTCCGGGAACGCGCCATCCG GGTGCTTGGGCCGCGGTTTGATCCCAAGGCGTTTCACCGGGTCATCCTGGCGGGCGGGCCGCGCCCGCTCAGCATGGTCG AGGAAGACGTGACCCGCTGGTACACCGAGCAGGTCGAGAACTGA
Upstream 100 bases:
>100_bases TGGCTCCTCGGAATTTTGGCGCAGAAGTAACGGAAATAAACTATGGCCACAACTCCCGAAACAGGCTCAATTGCAGTGAA AACCGAGTAATATAAGTGTC
Downstream 100 bases:
>100_bases GCCCTTCCCTGCGCGGTGTATGTCAGCGTGTCAGGCCGCCATGCGGACAGGCTCCTGGGTCGACCGGCAGACCGGCATGA AGCCCGCCTCCAGATCGGCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 627; Mature: 627
Protein sequence:
>627_residues MLAVTGRRTASLLPAGLCTALLMAVLPVACTPRADPEGTPRRVAREIEQTLTTVAQNEVTRDPELATRLGLAQADAGFAY NRHLTDRSQAAYERARLSRLETRDLLVRITRPARGSALARHLDTLIAAHETAETLFMGGYGASGLAASYPYVADHTRGAY LDVPDLLARFHPLRTPADARAFADRMAQFADAIEDDRRRLESDARAGVVPPAPVLRRMQALAATAAAQPPELSPPVVTFE NLTPGIRDLEPAERDRLIAQVRRLAADRVQPAYAAFADSLGTLANTAPELPGAWQLPEGTEYYAAALKAYTGDDAAAAGL HERGKLEVDALLAETGRALAALGLVEGSVGERLAILAAQPEQIYPDTEEGRAALIGRILAHTDRAAAAIPEQFDFTMPER AGLRAVPPEFAAFLPPAAYLPRSLSGSTPARVEINLARMNDWPDFSLAVTAFHELVPGHHLESSAARSAAELPLARQMVW NVAYGEGWASYAETLADELGLYSSDPLSRIGYLQSMLLRAAGLVADTGIHNERWTRDQAIAYLTETVGLSPERSADEVDR YTVRPGYAAAYWLGRERILDLRERAIRVLGPRFDPKAFHRVILAGGPRPLSMVEEDVTRWYTEQVEN
Sequences:
>Translated_627_residues MLAVTGRRTASLLPAGLCTALLMAVLPVACTPRADPEGTPRRVAREIEQTLTTVAQNEVTRDPELATRLGLAQADAGFAY NRHLTDRSQAAYERARLSRLETRDLLVRITRPARGSALARHLDTLIAAHETAETLFMGGYGASGLAASYPYVADHTRGAY LDVPDLLARFHPLRTPADARAFADRMAQFADAIEDDRRRLESDARAGVVPPAPVLRRMQALAATAAAQPPELSPPVVTFE NLTPGIRDLEPAERDRLIAQVRRLAADRVQPAYAAFADSLGTLANTAPELPGAWQLPEGTEYYAAALKAYTGDDAAAAGL HERGKLEVDALLAETGRALAALGLVEGSVGERLAILAAQPEQIYPDTEEGRAALIGRILAHTDRAAAAIPEQFDFTMPER AGLRAVPPEFAAFLPPAAYLPRSLSGSTPARVEINLARMNDWPDFSLAVTAFHELVPGHHLESSAARSAAELPLARQMVW NVAYGEGWASYAETLADELGLYSSDPLSRIGYLQSMLLRAAGLVADTGIHNERWTRDQAIAYLTETVGLSPERSADEVDR YTVRPGYAAAYWLGRERILDLRERAIRVLGPRFDPKAFHRVILAGGPRPLSMVEEDVTRWYTEQVEN >Mature_627_residues MLAVTGRRTASLLPAGLCTALLMAVLPVACTPRADPEGTPRRVAREIEQTLTTVAQNEVTRDPELATRLGLAQADAGFAY NRHLTDRSQAAYERARLSRLETRDLLVRITRPARGSALARHLDTLIAAHETAETLFMGGYGASGLAASYPYVADHTRGAY LDVPDLLARFHPLRTPADARAFADRMAQFADAIEDDRRRLESDARAGVVPPAPVLRRMQALAATAAAQPPELSPPVVTFE NLTPGIRDLEPAERDRLIAQVRRLAADRVQPAYAAFADSLGTLANTAPELPGAWQLPEGTEYYAAALKAYTGDDAAAAGL HERGKLEVDALLAETGRALAALGLVEGSVGERLAILAAQPEQIYPDTEEGRAALIGRILAHTDRAAAAIPEQFDFTMPER AGLRAVPPEFAAFLPPAAYLPRSLSGSTPARVEINLARMNDWPDFSLAVTAFHELVPGHHLESSAARSAAELPLARQMVW NVAYGEGWASYAETLADELGLYSSDPLSRIGYLQSMLLRAAGLVADTGIHNERWTRDQAIAYLTETVGLSPERSADEVDR YTVRPGYAAAYWLGRERILDLRERAIRVLGPRFDPKAFHRVILAGGPRPLSMVEEDVTRWYTEQVEN
Specific function: Unknown
COG id: COG4805
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 68177; Mature: 68177
Theoretical pI: Translated: 5.34; Mature: 5.34
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLAVTGRRTASLLPAGLCTALLMAVLPVACTPRADPEGTPRRVAREIEQTLTTVAQNEVT CEEECCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCC RDPELATRLGLAQADAGFAYNRHLTDRSQAAYERARLSRLETRDLLVRITRPARGSALAR CCHHHHHHHCCHHCCCCCEECCCCCHHHHHHHHHHHHHHHHHHHHHEEECCCCCHHHHHH HLDTLIAAHETAETLFMGGYGASGLAASYPYVADHTRGAYLDVPDLLARFHPLRTPADAR HHHHHHHHHHHHHHHEECCCCCCCHHCCCCCCCCCCCCCEECHHHHHHHHCCCCCCHHHH AFADRMAQFADAIEDDRRRLESDARAGVVPPAPVLRRMQALAATAAAQPPELSPPVVTFE HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCEEEEC NLTPGIRDLEPAERDRLIAQVRRLAADRVQPAYAAFADSLGTLANTAPELPGAWQLPEGT CCCCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC EYYAAALKAYTGDDAAAAGLHERGKLEVDALLAETGRALAALGLVEGSVGERLAILAAQP HHHHHHHHHHCCCCHHHHCCCCCCCCHHHHHHHHHCHHHHHHHHHCCCCCCEEEEEECCC EQIYPDTEEGRAALIGRILAHTDRAAAAIPEQFDFTMPERAGLRAVPPEFAAFLPPAAYL HHCCCCCCCHHHHHHHHHHHHCCHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHCCCHHHC PRSLSGSTPARVEINLARMNDWPDFSLAVTAFHELVPGHHLESSAARSAAELPLARQMVW CCCCCCCCCCEEEEEEEECCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHCHHHHHHHH NVAYGEGWASYAETLADELGLYSSDPLSRIGYLQSMLLRAAGLVADTGIHNERWTRDQAI HHHCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHH AYLTETVGLSPERSADEVDRYTVRPGYAAAYWLGRERILDLRERAIRVLGPRFDPKAFHR HHHHHHHCCCCCCCHHHHHCEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHE VILAGGPRPLSMVEEDVTRWYTEQVEN EHCCCCCCCHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MLAVTGRRTASLLPAGLCTALLMAVLPVACTPRADPEGTPRRVAREIEQTLTTVAQNEVT CEEECCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCC RDPELATRLGLAQADAGFAYNRHLTDRSQAAYERARLSRLETRDLLVRITRPARGSALAR CCHHHHHHHCCHHCCCCCEECCCCCHHHHHHHHHHHHHHHHHHHHHEEECCCCCHHHHHH HLDTLIAAHETAETLFMGGYGASGLAASYPYVADHTRGAYLDVPDLLARFHPLRTPADAR HHHHHHHHHHHHHHHEECCCCCCCHHCCCCCCCCCCCCCEECHHHHHHHHCCCCCCHHHH AFADRMAQFADAIEDDRRRLESDARAGVVPPAPVLRRMQALAATAAAQPPELSPPVVTFE HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCEEEEC NLTPGIRDLEPAERDRLIAQVRRLAADRVQPAYAAFADSLGTLANTAPELPGAWQLPEGT CCCCCCCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC EYYAAALKAYTGDDAAAAGLHERGKLEVDALLAETGRALAALGLVEGSVGERLAILAAQP HHHHHHHHHHCCCCHHHHCCCCCCCCHHHHHHHHHCHHHHHHHHHCCCCCCEEEEEECCC EQIYPDTEEGRAALIGRILAHTDRAAAAIPEQFDFTMPERAGLRAVPPEFAAFLPPAAYL HHCCCCCCCHHHHHHHHHHHHCCHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHCCCHHHC PRSLSGSTPARVEINLARMNDWPDFSLAVTAFHELVPGHHLESSAARSAAELPLARQMVW CCCCCCCCCCEEEEEEEECCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHCHHHHHHHH NVAYGEGWASYAETLADELGLYSSDPLSRIGYLQSMLLRAAGLVADTGIHNERWTRDQAI HHHCCCHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHH AYLTETVGLSPERSADEVDRYTVRPGYAAAYWLGRERILDLRERAIRVLGPRFDPKAFHR HHHHHHHCCCCCCCHHHHHCEECCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHE VILAGGPRPLSMVEEDVTRWYTEQVEN EHCCCCCCCHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA