| Definition | Hyphomonas neptunium ATCC 15444 chromosome, complete genome. |
|---|---|
| Accession | NC_008358 |
| Length | 3,705,021 |
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The map label for this gene is 114798272
Identifier: 114798272
GI number: 114798272
Start: 3626752
End: 3627315
Strand: Reverse
Name: 114798272
Synonym: HNE_3492
Alternate gene names: NA
Gene position: 3627315-3626752 (Counterclockwise)
Preceding gene: 114797802
Following gene: 114799277
Centisome position: 97.9
GC content: 66.13
Gene sequence:
>564_bases ATGCCCCGCCCGGAACTCTGGACCCGCATCTTCGCCCTCCTCGGCGCGCTGCGGACCCTCCTGCGCGAGGCCGTCCCCGA ACTCTTCGGTACCATCGCAGGCGACGCCCGCGCCCAGCTCGTGGCCGTCACATCGCTGGTGCGCCGCTACATCCACGTGC TTGCCGCTGAGCTGAGCCTTCCGCCGCTCGCGGTTGGAGTTCCCAAAGAAAACTCCAAGAGTAATTCTGAAAAACTCCAA CCGCGCCGCGAAGCCCCGTTCCGCCTCACGGAACTGATCAGCCCGCCCAAAGGCTCATCCGCCAGCGAAGGCACCGACAC CCCGTTCATCCAATGGGCTCTGATGTTCGAAGCAGCCCGGCGCCTGAATGCCGTCCTGGCCACCCCCCAGAAACACGCCC TCCGCCTCGCCCGCCTCTTGCGCAAGCGTAAAGGCGAAACGCTCAAACCCATGCCCGTCCCCGGCCACATTCTCCGCCGT CTACCCCCCTGGACCGACGCGCTGCTCTGCCGGCTGGATGAAGAGGCAAGACCAGAGGCGTGGGCCGGGATCAACACGTC CTGA
Upstream 100 bases:
>100_bases GTCCCGGATCGGCCCATGGGGCCGTCCGGGATGACACGGAATAACAAAACTTATCCGCCGGGGTCCCCCGCGCCGTCATC CTAGCGCCATGTTCGATCAC
Downstream 100 bases:
>100_bases TGCTGAACGCCGGACCATAAAAAAGCGCCTCCCCTGAAGGTCAGGGGAGGGCGCCGGTGTTTGTGTTGGCGTGAAAGCGA TCAGTTCTTGCCGAACTTCC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 187; Mature: 186
Protein sequence:
>187_residues MPRPELWTRIFALLGALRTLLREAVPELFGTIAGDARAQLVAVTSLVRRYIHVLAAELSLPPLAVGVPKENSKSNSEKLQ PRREAPFRLTELISPPKGSSASEGTDTPFIQWALMFEAARRLNAVLATPQKHALRLARLLRKRKGETLKPMPVPGHILRR LPPWTDALLCRLDEEARPEAWAGINTS
Sequences:
>Translated_187_residues MPRPELWTRIFALLGALRTLLREAVPELFGTIAGDARAQLVAVTSLVRRYIHVLAAELSLPPLAVGVPKENSKSNSEKLQ PRREAPFRLTELISPPKGSSASEGTDTPFIQWALMFEAARRLNAVLATPQKHALRLARLLRKRKGETLKPMPVPGHILRR LPPWTDALLCRLDEEARPEAWAGINTS >Mature_186_residues PRPELWTRIFALLGALRTLLREAVPELFGTIAGDARAQLVAVTSLVRRYIHVLAAELSLPPLAVGVPKENSKSNSEKLQP RREAPFRLTELISPPKGSSASEGTDTPFIQWALMFEAARRLNAVLATPQKHALRLARLLRKRKGETLKPMPVPGHILRRL PPWTDALLCRLDEEARPEAWAGINTS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20802; Mature: 20670
Theoretical pI: Translated: 11.27; Mature: 11.27
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPRPELWTRIFALLGALRTLLREAVPELFGTIAGDARAQLVAVTSLVRRYIHVLAAELSL CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCC PPLAVGVPKENSKSNSEKLQPRREAPFRLTELISPPKGSSASEGTDTPFIQWALMFEAAR CCEEECCCCCCCCCCHHHCCCHHCCCHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHH RLNAVLATPQKHALRLARLLRKRKGETLKPMPVPGHILRRLPPWTDALLCRLDEEARPEA HHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHCCCHHHHHHHHCCHHCCCCC WAGINTS CCCCCCC >Mature Secondary Structure PRPELWTRIFALLGALRTLLREAVPELFGTIAGDARAQLVAVTSLVRRYIHVLAAELSL CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCC PPLAVGVPKENSKSNSEKLQPRREAPFRLTELISPPKGSSASEGTDTPFIQWALMFEAAR CCEEECCCCCCCCCCHHHCCCHHCCCHHHHHHCCCCCCCCCCCCCCCHHHHHHHHHHHHH RLNAVLATPQKHALRLARLLRKRKGETLKPMPVPGHILRRLPPWTDALLCRLDEEARPEA HHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHCCCHHHHHHHHCCHHCCCCC WAGINTS CCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA