Definition Hyphomonas neptunium ATCC 15444 chromosome, complete genome.
Accession NC_008358
Length 3,705,021

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The map label for this gene is 114798271

Identifier: 114798271

GI number: 114798271

Start: 2693495

End: 2694640

Strand: Reverse

Name: 114798271

Synonym: HNE_2541

Alternate gene names: NA

Gene position: 2694640-2693495 (Counterclockwise)

Preceding gene: 114798203

Following gene: 114800126

Centisome position: 72.73

GC content: 54.54

Gene sequence:

>1146_bases
ATGAATTGGCCCCTCAGAACGCTTGACGAGATTTTCGAGATCGCGCGCGGAGGCTCGCCCCGTCCGATTGACCAATTCAT
CACGGATGCGGACGACGGCGTGAATTGGATCATGATCGGCGATGCGTCAAACAGCTCGAAGCACATTCGTGAGACCAAGA
AAAAGATCAAACCATCTGGGGTATCACGGTCCCGATTGGTTAAACCGGGTGACTTCCTTCTCACAAACTCTATGAGCTTC
GGAAGGCCTTACATCCTCGATACACACGGTTGCATACATGACGGCTGGCTTGTTCTTAGTCCACGCCGCGCCAACGTGGA
TCACGACTATTTTTATCACTTGCTCGGCTCGCCTGCGATCTTCGGGCAATTTGAGAAACTGGCGGCGGGCGCGACGGTCA
AGAACCTGAACATCGACTTGGTCAAAAGAGTCATCGTCGCGCTCCCTCCGCTGGAGGAGCAGAAGCGGATTGCGGCGATC
CTGGATCAGGCCGATGAGCTGCGCCGCAAACGCCAGCGCGCCCTCGACCGCCTCAACCAACTCGGCCAAGCCATCTTCAT
CGACATGTTTGGTGATGGGGCCTCGTTCGAGAGCGCATCACTCAGAACGTTAGGAAGAGTCTCAACTGGCTCAACGCCAC
CCACCTCTGATGCGGATAGCTTCGGCGGACCGGTGCCCTTTGTCACGCCAGGAGACCTCGGCTCCGGTGAAGCCGTAAAA
CGAAGTCTGACTGAAGCCGGTGCTCAGAAGTCACGATTGGTCGGCCCTGGAGCCACGTTGGTGTGCTGTATCGGCGCGAC
CATCGGGAAGATGGGGCAAGCAAGGGAGCGGTCAGCGTTTAATCAACAGATAAACGCTGTTGATTGGGGTGATCGAATTG
GGGCTGCCTTCGGCTTCTTTGCTGTTCAGCAAATTCGCAGCCTAATAATCCACAAGGGCAAGGGGGCATCCACTACGCTT
CCAATACTGAAAAAATCTGAGTTTGAAAAACTAGAGATTTTTGTTCCGCCGATGGTTGAGCAGCAGGAATTCGCCCATCG
TGTAGGTATTGTTCAATGTTCGCTGACCGACGCTTCATTACACAATAGCCGATTAGAGGAGCTGTTCGCTTCTCTCCAAC
ACCGCGCATTCCGAGGAGAACTATAG

Upstream 100 bases:

>100_bases
AGGAGGTGGAGCACGAAAGCCCCGCCGCTATAATCGCCGACCTGCGCAAGCTGGAGGACGAGATAAGCAAAAGCCTCACC
AACCTGGAGGCAATGCTGGG

Downstream 100 bases:

>100_bases
CGATGCGAGGCGACCTCAAATCAGCTTGGCCATATGTGTGGAGTGATATCTGGGTTCGGCTCTACGAAACTAGGGGTGCC
CCAGTCGAGCTGTTCTCCGA

Product: type I restriction-modification system, S subunit

Products: NA

Alternate protein names: S.MjaXIP; Type I restriction enzyme MjaXIP specificity protein; S protein [H]

Number of amino acids: Translated: 381; Mature: 381

Protein sequence:

>381_residues
MNWPLRTLDEIFEIARGGSPRPIDQFITDADDGVNWIMIGDASNSSKHIRETKKKIKPSGVSRSRLVKPGDFLLTNSMSF
GRPYILDTHGCIHDGWLVLSPRRANVDHDYFYHLLGSPAIFGQFEKLAAGATVKNLNIDLVKRVIVALPPLEEQKRIAAI
LDQADELRRKRQRALDRLNQLGQAIFIDMFGDGASFESASLRTLGRVSTGSTPPTSDADSFGGPVPFVTPGDLGSGEAVK
RSLTEAGAQKSRLVGPGATLVCCIGATIGKMGQARERSAFNQQINAVDWGDRIGAAFGFFAVQQIRSLIIHKGKGASTTL
PILKKSEFEKLEIFVPPMVEQQEFAHRVGIVQCSLTDASLHNSRLEELFASLQHRAFRGEL

Sequences:

>Translated_381_residues
MNWPLRTLDEIFEIARGGSPRPIDQFITDADDGVNWIMIGDASNSSKHIRETKKKIKPSGVSRSRLVKPGDFLLTNSMSF
GRPYILDTHGCIHDGWLVLSPRRANVDHDYFYHLLGSPAIFGQFEKLAAGATVKNLNIDLVKRVIVALPPLEEQKRIAAI
LDQADELRRKRQRALDRLNQLGQAIFIDMFGDGASFESASLRTLGRVSTGSTPPTSDADSFGGPVPFVTPGDLGSGEAVK
RSLTEAGAQKSRLVGPGATLVCCIGATIGKMGQARERSAFNQQINAVDWGDRIGAAFGFFAVQQIRSLIIHKGKGASTTL
PILKKSEFEKLEIFVPPMVEQQEFAHRVGIVQCSLTDASLHNSRLEELFASLQHRAFRGEL
>Mature_381_residues
MNWPLRTLDEIFEIARGGSPRPIDQFITDADDGVNWIMIGDASNSSKHIRETKKKIKPSGVSRSRLVKPGDFLLTNSMSF
GRPYILDTHGCIHDGWLVLSPRRANVDHDYFYHLLGSPAIFGQFEKLAAGATVKNLNIDLVKRVIVALPPLEEQKRIAAI
LDQADELRRKRQRALDRLNQLGQAIFIDMFGDGASFESASLRTLGRVSTGSTPPTSDADSFGGPVPFVTPGDLGSGEAVK
RSLTEAGAQKSRLVGPGATLVCCIGATIGKMGQARERSAFNQQINAVDWGDRIGAAFGFFAVQQIRSLIIHKGKGASTTL
PILKKSEFEKLEIFVPPMVEQQEFAHRVGIVQCSLTDASLHNSRLEELFASLQHRAFRGEL

Specific function: The M and S subunits together form a methyltransferase (MTase) that methylates two adenine residues in complementary strands of a bipartite DNA recognition sequence. In the presence of the R subunit the complex can also act as an endonuclease, binding to

COG id: COG0732

COG function: function code V; Restriction endonuclease S subunits

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the type-I restriction system S methylase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000055 [H]

Pfam domain/function: PF01420 Methylase_S [H]

EC number: NA

Molecular weight: Translated: 41762; Mature: 41762

Theoretical pI: Translated: 9.22; Mature: 9.22

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNWPLRTLDEIFEIARGGSPRPIDQFITDADDGVNWIMIGDASNSSKHIRETKKKIKPSG
CCCCHHHHHHHHHHHCCCCCCCHHHHHCCCCCCCEEEEEECCCCCHHHHHHHHHHCCCCC
VSRSRLVKPGDFLLTNSMSFGRPYILDTHGCIHDGWLVLSPRRANVDHDYFYHLLGSPAI
CCHHHCCCCCCEEEECCCCCCCCEEEECCCCEECCEEEECCCCCCCCHHHHHHHHCCCHH
FGQFEKLAAGATVKNLNIDLVKRVIVALPPLEEQKRIAAILDQADELRRKRQRALDRLNQ
HHHHHHHHCCCEEECCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LGQAIFIDMFGDGASFESASLRTLGRVSTGSTPPTSDADSFGGPVPFVTPGDLGSGEAVK
HCCEEEEEECCCCCCCCCHHHHHHHCCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCHHHH
RSLTEAGAQKSRLVGPGATLVCCIGATIGKMGQARERSAFNQQINAVDWGDRIGAAFGFF
HHHHHHCCHHCCCCCCCCCEEHHHHHHHHHHCCHHHHHHHHHHCCCCCCCHHHHHHHHHH
AVQQIRSLIIHKGKGASTTLPILKKSEFEKLEIFVPPMVEQQEFAHRVGIVQCSLTDASL
HHHHHHHHHHCCCCCCCCCCCHHHCCCCCEEEEECCCCCCHHHHHHHHCEEEEECCHHHH
HNSRLEELFASLQHRAFRGEL
HHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure
MNWPLRTLDEIFEIARGGSPRPIDQFITDADDGVNWIMIGDASNSSKHIRETKKKIKPSG
CCCCHHHHHHHHHHHCCCCCCCHHHHHCCCCCCCEEEEEECCCCCHHHHHHHHHHCCCCC
VSRSRLVKPGDFLLTNSMSFGRPYILDTHGCIHDGWLVLSPRRANVDHDYFYHLLGSPAI
CCHHHCCCCCCEEEECCCCCCCCEEEECCCCEECCEEEECCCCCCCCHHHHHHHHCCCHH
FGQFEKLAAGATVKNLNIDLVKRVIVALPPLEEQKRIAAILDQADELRRKRQRALDRLNQ
HHHHHHHHCCCEEECCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LGQAIFIDMFGDGASFESASLRTLGRVSTGSTPPTSDADSFGGPVPFVTPGDLGSGEAVK
HCCEEEEEECCCCCCCCCHHHHHHHCCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCHHHH
RSLTEAGAQKSRLVGPGATLVCCIGATIGKMGQARERSAFNQQINAVDWGDRIGAAFGFF
HHHHHHCCHHCCCCCCCCCEEHHHHHHHHHHCCHHHHHHHHHHCCCCCCCHHHHHHHHHH
AVQQIRSLIIHKGKGASTTLPILKKSEFEKLEIFVPPMVEQQEFAHRVGIVQCSLTDASL
HHHHHHHHHHCCCCCCCCCCCHHHCCCCCEEEEECCCCCCHHHHHHHHCEEEEECCHHHH
HNSRLEELFASLQHRAFRGEL
HHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]