| Definition | Hyphomonas neptunium ATCC 15444 chromosome, complete genome. |
|---|---|
| Accession | NC_008358 |
| Length | 3,705,021 |
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The map label for this gene is 114798271
Identifier: 114798271
GI number: 114798271
Start: 2693495
End: 2694640
Strand: Reverse
Name: 114798271
Synonym: HNE_2541
Alternate gene names: NA
Gene position: 2694640-2693495 (Counterclockwise)
Preceding gene: 114798203
Following gene: 114800126
Centisome position: 72.73
GC content: 54.54
Gene sequence:
>1146_bases ATGAATTGGCCCCTCAGAACGCTTGACGAGATTTTCGAGATCGCGCGCGGAGGCTCGCCCCGTCCGATTGACCAATTCAT CACGGATGCGGACGACGGCGTGAATTGGATCATGATCGGCGATGCGTCAAACAGCTCGAAGCACATTCGTGAGACCAAGA AAAAGATCAAACCATCTGGGGTATCACGGTCCCGATTGGTTAAACCGGGTGACTTCCTTCTCACAAACTCTATGAGCTTC GGAAGGCCTTACATCCTCGATACACACGGTTGCATACATGACGGCTGGCTTGTTCTTAGTCCACGCCGCGCCAACGTGGA TCACGACTATTTTTATCACTTGCTCGGCTCGCCTGCGATCTTCGGGCAATTTGAGAAACTGGCGGCGGGCGCGACGGTCA AGAACCTGAACATCGACTTGGTCAAAAGAGTCATCGTCGCGCTCCCTCCGCTGGAGGAGCAGAAGCGGATTGCGGCGATC CTGGATCAGGCCGATGAGCTGCGCCGCAAACGCCAGCGCGCCCTCGACCGCCTCAACCAACTCGGCCAAGCCATCTTCAT CGACATGTTTGGTGATGGGGCCTCGTTCGAGAGCGCATCACTCAGAACGTTAGGAAGAGTCTCAACTGGCTCAACGCCAC CCACCTCTGATGCGGATAGCTTCGGCGGACCGGTGCCCTTTGTCACGCCAGGAGACCTCGGCTCCGGTGAAGCCGTAAAA CGAAGTCTGACTGAAGCCGGTGCTCAGAAGTCACGATTGGTCGGCCCTGGAGCCACGTTGGTGTGCTGTATCGGCGCGAC CATCGGGAAGATGGGGCAAGCAAGGGAGCGGTCAGCGTTTAATCAACAGATAAACGCTGTTGATTGGGGTGATCGAATTG GGGCTGCCTTCGGCTTCTTTGCTGTTCAGCAAATTCGCAGCCTAATAATCCACAAGGGCAAGGGGGCATCCACTACGCTT CCAATACTGAAAAAATCTGAGTTTGAAAAACTAGAGATTTTTGTTCCGCCGATGGTTGAGCAGCAGGAATTCGCCCATCG TGTAGGTATTGTTCAATGTTCGCTGACCGACGCTTCATTACACAATAGCCGATTAGAGGAGCTGTTCGCTTCTCTCCAAC ACCGCGCATTCCGAGGAGAACTATAG
Upstream 100 bases:
>100_bases AGGAGGTGGAGCACGAAAGCCCCGCCGCTATAATCGCCGACCTGCGCAAGCTGGAGGACGAGATAAGCAAAAGCCTCACC AACCTGGAGGCAATGCTGGG
Downstream 100 bases:
>100_bases CGATGCGAGGCGACCTCAAATCAGCTTGGCCATATGTGTGGAGTGATATCTGGGTTCGGCTCTACGAAACTAGGGGTGCC CCAGTCGAGCTGTTCTCCGA
Product: type I restriction-modification system, S subunit
Products: NA
Alternate protein names: S.MjaXIP; Type I restriction enzyme MjaXIP specificity protein; S protein [H]
Number of amino acids: Translated: 381; Mature: 381
Protein sequence:
>381_residues MNWPLRTLDEIFEIARGGSPRPIDQFITDADDGVNWIMIGDASNSSKHIRETKKKIKPSGVSRSRLVKPGDFLLTNSMSF GRPYILDTHGCIHDGWLVLSPRRANVDHDYFYHLLGSPAIFGQFEKLAAGATVKNLNIDLVKRVIVALPPLEEQKRIAAI LDQADELRRKRQRALDRLNQLGQAIFIDMFGDGASFESASLRTLGRVSTGSTPPTSDADSFGGPVPFVTPGDLGSGEAVK RSLTEAGAQKSRLVGPGATLVCCIGATIGKMGQARERSAFNQQINAVDWGDRIGAAFGFFAVQQIRSLIIHKGKGASTTL PILKKSEFEKLEIFVPPMVEQQEFAHRVGIVQCSLTDASLHNSRLEELFASLQHRAFRGEL
Sequences:
>Translated_381_residues MNWPLRTLDEIFEIARGGSPRPIDQFITDADDGVNWIMIGDASNSSKHIRETKKKIKPSGVSRSRLVKPGDFLLTNSMSF GRPYILDTHGCIHDGWLVLSPRRANVDHDYFYHLLGSPAIFGQFEKLAAGATVKNLNIDLVKRVIVALPPLEEQKRIAAI LDQADELRRKRQRALDRLNQLGQAIFIDMFGDGASFESASLRTLGRVSTGSTPPTSDADSFGGPVPFVTPGDLGSGEAVK RSLTEAGAQKSRLVGPGATLVCCIGATIGKMGQARERSAFNQQINAVDWGDRIGAAFGFFAVQQIRSLIIHKGKGASTTL PILKKSEFEKLEIFVPPMVEQQEFAHRVGIVQCSLTDASLHNSRLEELFASLQHRAFRGEL >Mature_381_residues MNWPLRTLDEIFEIARGGSPRPIDQFITDADDGVNWIMIGDASNSSKHIRETKKKIKPSGVSRSRLVKPGDFLLTNSMSF GRPYILDTHGCIHDGWLVLSPRRANVDHDYFYHLLGSPAIFGQFEKLAAGATVKNLNIDLVKRVIVALPPLEEQKRIAAI LDQADELRRKRQRALDRLNQLGQAIFIDMFGDGASFESASLRTLGRVSTGSTPPTSDADSFGGPVPFVTPGDLGSGEAVK RSLTEAGAQKSRLVGPGATLVCCIGATIGKMGQARERSAFNQQINAVDWGDRIGAAFGFFAVQQIRSLIIHKGKGASTTL PILKKSEFEKLEIFVPPMVEQQEFAHRVGIVQCSLTDASLHNSRLEELFASLQHRAFRGEL
Specific function: The M and S subunits together form a methyltransferase (MTase) that methylates two adenine residues in complementary strands of a bipartite DNA recognition sequence. In the presence of the R subunit the complex can also act as an endonuclease, binding to
COG id: COG0732
COG function: function code V; Restriction endonuclease S subunits
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the type-I restriction system S methylase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000055 [H]
Pfam domain/function: PF01420 Methylase_S [H]
EC number: NA
Molecular weight: Translated: 41762; Mature: 41762
Theoretical pI: Translated: 9.22; Mature: 9.22
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNWPLRTLDEIFEIARGGSPRPIDQFITDADDGVNWIMIGDASNSSKHIRETKKKIKPSG CCCCHHHHHHHHHHHCCCCCCCHHHHHCCCCCCCEEEEEECCCCCHHHHHHHHHHCCCCC VSRSRLVKPGDFLLTNSMSFGRPYILDTHGCIHDGWLVLSPRRANVDHDYFYHLLGSPAI CCHHHCCCCCCEEEECCCCCCCCEEEECCCCEECCEEEECCCCCCCCHHHHHHHHCCCHH FGQFEKLAAGATVKNLNIDLVKRVIVALPPLEEQKRIAAILDQADELRRKRQRALDRLNQ HHHHHHHHCCCEEECCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LGQAIFIDMFGDGASFESASLRTLGRVSTGSTPPTSDADSFGGPVPFVTPGDLGSGEAVK HCCEEEEEECCCCCCCCCHHHHHHHCCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCHHHH RSLTEAGAQKSRLVGPGATLVCCIGATIGKMGQARERSAFNQQINAVDWGDRIGAAFGFF HHHHHHCCHHCCCCCCCCCEEHHHHHHHHHHCCHHHHHHHHHHCCCCCCCHHHHHHHHHH AVQQIRSLIIHKGKGASTTLPILKKSEFEKLEIFVPPMVEQQEFAHRVGIVQCSLTDASL HHHHHHHHHHCCCCCCCCCCCHHHCCCCCEEEEECCCCCCHHHHHHHHCEEEEECCHHHH HNSRLEELFASLQHRAFRGEL HHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MNWPLRTLDEIFEIARGGSPRPIDQFITDADDGVNWIMIGDASNSSKHIRETKKKIKPSG CCCCHHHHHHHHHHHCCCCCCCHHHHHCCCCCCCEEEEEECCCCCHHHHHHHHHHCCCCC VSRSRLVKPGDFLLTNSMSFGRPYILDTHGCIHDGWLVLSPRRANVDHDYFYHLLGSPAI CCHHHCCCCCCEEEECCCCCCCCEEEECCCCEECCEEEECCCCCCCCHHHHHHHHCCCHH FGQFEKLAAGATVKNLNIDLVKRVIVALPPLEEQKRIAAILDQADELRRKRQRALDRLNQ HHHHHHHHCCCEEECCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LGQAIFIDMFGDGASFESASLRTLGRVSTGSTPPTSDADSFGGPVPFVTPGDLGSGEAVK HCCEEEEEECCCCCCCCCHHHHHHHCCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCHHHH RSLTEAGAQKSRLVGPGATLVCCIGATIGKMGQARERSAFNQQINAVDWGDRIGAAFGFF HHHHHHCCHHCCCCCCCCCEEHHHHHHHHHHCCHHHHHHHHHHCCCCCCCHHHHHHHHHH AVQQIRSLIIHKGKGASTTLPILKKSEFEKLEIFVPPMVEQQEFAHRVGIVQCSLTDASL HHHHHHHHHHCCCCCCCCCCCHHHCCCCCEEEEECCCCCCHHHHHHHHCEEEEECCHHHH HNSRLEELFASLQHRAFRGEL HHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8688087 [H]