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The map label for this gene is 114798270

Identifier: 114798270

GI number: 114798270

Start: 2707555

End: 2708373

Strand: Reverse

Name: 114798270

Synonym: HNE_2553

Alternate gene names: NA

Gene position: 2708373-2707555 (Counterclockwise)

Preceding gene: 114798955

Following gene: 114799758

Centisome position: 73.1

GC content: 53.24

Gene sequence:

>819_bases
ATGCGTAAACACGAATTTCGCGTTGTGCCGCTGAGAAAGCATAAAGTCGACGGCGAACTTTACACACGGCGATCGCCAAC
AACCCAGTTCATCGATAAGAGCCTCGACTGGCCATTCGAAGACCTGATCGACCGTGCAACAATACGGGATCGGTCTCACA
GCAACTATGTCCCCTCAGAAGTTCTTGTTTATCATCTGCGCCAGACGAAGTCGGACAATTCAGACGGTCGATTCATTCAA
CTCTACAACATTTTGCGCGATCGGACCGAAGCCGCGTGTCCACGACCAAACCGACACGCGGGCGAAAAAATCTATGAAAA
TGCGCATCTTTCCGAGATACGTGACGCGACAGTCAATCATGTCACGGAGCTGATGTTTACCGACCGGCAGGACTATGACG
AGCAGCTCGATATCTACGAGGTTGTCTTCGACAAGGCGGTCCGCGCGGCTCATATCACGAAGCTCCGAAAGGTATACCGG
CGGCAACGGGCGAGTGAAGACGTAGAGGACGAAGTCACCGGCGCGGCGCGCGCTGTCGTCGAAGCCGCCTTGGAGCGCTA
CAACAAAGTTGGTCTCACAGCTGAAGAAGATCTCGATTACCGGATTCACCTGCGTGGCGCGATTGATGCTCTACCGACTG
ACGAACGAGAGGTGATTGATTTGATGCTCGCAGACATTCCCATTGAAACGAACAAAAATGGCGAAGCGTCGATAACCGAG
CTTTTGGGCTGCGTGGAAAAGACTGTGCGCAATCGGCGGGATCGAGCTTTTGCAAAGATCCGGCAAGCATTAGAGTTGGA
GGTGGATGATGGCCAGTAG

Upstream 100 bases:

>100_bases
TACCGAAATATTTAATAAGAAGCATACTCTCGGAGGGTGCATATAGTGGCGTCATTAGCACTGAATATTGCGTGCTTGCG
GAGGAGGATGAGCCTGAGGC

Downstream 100 bases:

>100_bases
AGAAAACGTCCTCAACGACTTCACTGTGGAAGAGGAGATGTCGCCCGCCATCCTCAAGGCGTATCTTCAGCGCTACCCCG
AATATACCCAGGACCTCCTT

Product: hypothetical protein

Products: NA

Alternate protein names: ECF Subfamily RNA Polymerase Sigma-24 Factor; RNA Polymerase Sigma-24 Subunit ECF Subfamily; Chromosome Segregation ATPase

Number of amino acids: Translated: 272; Mature: 272

Protein sequence:

>272_residues
MRKHEFRVVPLRKHKVDGELYTRRSPTTQFIDKSLDWPFEDLIDRATIRDRSHSNYVPSEVLVYHLRQTKSDNSDGRFIQ
LYNILRDRTEAACPRPNRHAGEKIYENAHLSEIRDATVNHVTELMFTDRQDYDEQLDIYEVVFDKAVRAAHITKLRKVYR
RQRASEDVEDEVTGAARAVVEAALERYNKVGLTAEEDLDYRIHLRGAIDALPTDEREVIDLMLADIPIETNKNGEASITE
LLGCVEKTVRNRRDRAFAKIRQALELEVDDGQ

Sequences:

>Translated_272_residues
MRKHEFRVVPLRKHKVDGELYTRRSPTTQFIDKSLDWPFEDLIDRATIRDRSHSNYVPSEVLVYHLRQTKSDNSDGRFIQ
LYNILRDRTEAACPRPNRHAGEKIYENAHLSEIRDATVNHVTELMFTDRQDYDEQLDIYEVVFDKAVRAAHITKLRKVYR
RQRASEDVEDEVTGAARAVVEAALERYNKVGLTAEEDLDYRIHLRGAIDALPTDEREVIDLMLADIPIETNKNGEASITE
LLGCVEKTVRNRRDRAFAKIRQALELEVDDGQ
>Mature_272_residues
MRKHEFRVVPLRKHKVDGELYTRRSPTTQFIDKSLDWPFEDLIDRATIRDRSHSNYVPSEVLVYHLRQTKSDNSDGRFIQ
LYNILRDRTEAACPRPNRHAGEKIYENAHLSEIRDATVNHVTELMFTDRQDYDEQLDIYEVVFDKAVRAAHITKLRKVYR
RQRASEDVEDEVTGAARAVVEAALERYNKVGLTAEEDLDYRIHLRGAIDALPTDEREVIDLMLADIPIETNKNGEASITE
LLGCVEKTVRNRRDRAFAKIRQALELEVDDGQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 31633; Mature: 31633

Theoretical pI: Translated: 5.87; Mature: 5.87

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRKHEFRVVPLRKHKVDGELYTRRSPTTQFIDKSLDWPFEDLIDRATIRDRSHSNYVPSE
CCCCCEEEEEHHHHCCCCHHEECCCCHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCHH
VLVYHLRQTKSDNSDGRFIQLYNILRDRTEAACPRPNRHAGEKIYENAHLSEIRDATVNH
HHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCHHHHHHHHHHHH
VTELMFTDRQDYDEQLDIYEVVFDKAVRAAHITKLRKVYRRQRASEDVEDEVTGAARAVV
HHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH
EAALERYNKVGLTAEEDLDYRIHLRGAIDALPTDEREVIDLMLADIPIETNKNGEASITE
HHHHHHHHHCCCCCCCCCCEEEEEEECCCCCCCCHHHHHHHHHHHCCCCCCCCCCHHHHH
LLGCVEKTVRNRRDRAFAKIRQALELEVDDGQ
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure
MRKHEFRVVPLRKHKVDGELYTRRSPTTQFIDKSLDWPFEDLIDRATIRDRSHSNYVPSE
CCCCCEEEEEHHHHCCCCHHEECCCCHHHHHHHCCCCCHHHHHHHHHHHCCCCCCCCCHH
VLVYHLRQTKSDNSDGRFIQLYNILRDRTEAACPRPNRHAGEKIYENAHLSEIRDATVNH
HHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHCCCCCCCHHHHHHHHCCHHHHHHHHHHHH
VTELMFTDRQDYDEQLDIYEVVFDKAVRAAHITKLRKVYRRQRASEDVEDEVTGAARAVV
HHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHH
EAALERYNKVGLTAEEDLDYRIHLRGAIDALPTDEREVIDLMLADIPIETNKNGEASITE
HHHHHHHHHCCCCCCCCCCEEEEEEECCCCCCCCHHHHHHHHHHHCCCCCCCCCCHHHHH
LLGCVEKTVRNRRDRAFAKIRQALELEVDDGQ
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA