Definition Hyphomonas neptunium ATCC 15444 chromosome, complete genome.
Accession NC_008358
Length 3,705,021

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The map label for this gene is ygaY [H]

Identifier: 114798199

GI number: 114798199

Start: 946329

End: 947519

Strand: Direct

Name: ygaY [H]

Synonym: HNE_0931

Alternate gene names: 114798199

Gene position: 946329-947519 (Clockwise)

Preceding gene: 114797271

Following gene: 114799963

Centisome position: 25.54

GC content: 61.38

Gene sequence:

>1191_bases
TTGACGCGCCGGGACCTGTTGCTGCTGACGCTTGCGGGCGCGGTGGTTACGGCCAACGCATATTATATCCATCCGATCAT
CGCCCTTGTGGCGAAGGATTTTGGCGTGTCGGCGTCTGCCATCGGCCTGGTGCCTGCGCTGAACCAGATTGCGCTGGCGC
TCGGCATTTTCTTTCTTCTTCCGCTGGGTGACCGGTTCAGTAACCGGCAGCTTGCCATCGTGTTTGCCGCCGGCCAGTTC
GTCGGCCTGCTGATGATGGCGTTCGGAGGCAGTTTCTGGCTGTTCGTTGCAGGCTCCACCTTCCTCGGCTTTTCAACGAT
CACGCCTTACCTTCTGCCTGCCTATGCCTCCAAAAGGGTGGCGCCGGGGGATCTGGGCCGCGTCACGGCGACCCTGACGA
CGGGCGTGATTGCGGGCATCCTGCTGGCGCGCGTGGGTGCGGGATGGGTGGGCGAGCATCTTGGCTGGCGCACGGTTTAC
TACATTGCGGCGGGCGTCATGCTCGTGATCACATTGCTCCTGCCCCGGATCATGGACGGGCGAGAAAAATCTGAAGACCA
GGCGCCCGCGGGCAGCTATTTCGGCCTTGTGCTTTCGATGTTCCCGATTGTGCGGCGTCACCCCGAAGTGCTGATCTCCG
GCACGATCCAGGGCATCGGCTTTGGGGTGTTTCTCTCGGTCTGGCTGACCCTTGGTCTGCATCTGACCAGCCCCGAGATG
GGGTATGGCGCCGATACAGTTGGCTATCTCGCCGGGCTGGCTTTGTTAAACCTTCTGACGACGGCGCCGCTCGGGGCCTG
GGCAGACCGGACGGGTCCGAGAAAGGCACGTCTTATCATTTCCATTGTCCAGTTTTCCGGCGTCTGCCTGCTGGGGGTGT
TCGGCCACAGCCTATGGCTGTTGATGATCCCGCTGACGATGATGAATGTGGTTGGTCCGCTGATCGATGTGACAGGCCGG
ATGACCTTTCTCAGCCAGCCGCCCGGCGTGCGCACGCGCCTGATGACGGCTTATATCGTGCTGATGTTCATTGGCGGGGG
TGTTGCCAGCTGGGCGGCAACCTTTGTGTATGAGCAGGGCGGCTGGGCAGCCACAACCAAGCTGACGCTTGTGCTCTCGG
CCTTGCTGGTGATGCTGTCATTCCTGAGCCTTGTGATTTTCGGGAAGGATGCCGGGCGCAGCAAGACGTGA

Upstream 100 bases:

>100_bases
CGCTGGCCAAATTCGCCGCTGAATACGCGCGCCGCGCCGGCATGCCGGGGTGAGCGTTGCTCCCACCAGTCCGCCGGCGC
CGGAGAGCGGCCGGCGGCTG

Downstream 100 bases:

>100_bases
CGCGCCGTCCTGAACATGGCAGGATCATGTGAAACGGAGGAACCATGACCGACATTCTCAAAGGCCCGCTGCGCAGCCCC
GTCAACATGCTCACCGAGCA

Product: major facilitator family transporter

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 396; Mature: 395

Protein sequence:

>396_residues
MTRRDLLLLTLAGAVVTANAYYIHPIIALVAKDFGVSASAIGLVPALNQIALALGIFFLLPLGDRFSNRQLAIVFAAGQF
VGLLMMAFGGSFWLFVAGSTFLGFSTITPYLLPAYASKRVAPGDLGRVTATLTTGVIAGILLARVGAGWVGEHLGWRTVY
YIAAGVMLVITLLLPRIMDGREKSEDQAPAGSYFGLVLSMFPIVRRHPEVLISGTIQGIGFGVFLSVWLTLGLHLTSPEM
GYGADTVGYLAGLALLNLLTTAPLGAWADRTGPRKARLIISIVQFSGVCLLGVFGHSLWLLMIPLTMMNVVGPLIDVTGR
MTFLSQPPGVRTRLMTAYIVLMFIGGGVASWAATFVYEQGGWAATTKLTLVLSALLVMLSFLSLVIFGKDAGRSKT

Sequences:

>Translated_396_residues
MTRRDLLLLTLAGAVVTANAYYIHPIIALVAKDFGVSASAIGLVPALNQIALALGIFFLLPLGDRFSNRQLAIVFAAGQF
VGLLMMAFGGSFWLFVAGSTFLGFSTITPYLLPAYASKRVAPGDLGRVTATLTTGVIAGILLARVGAGWVGEHLGWRTVY
YIAAGVMLVITLLLPRIMDGREKSEDQAPAGSYFGLVLSMFPIVRRHPEVLISGTIQGIGFGVFLSVWLTLGLHLTSPEM
GYGADTVGYLAGLALLNLLTTAPLGAWADRTGPRKARLIISIVQFSGVCLLGVFGHSLWLLMIPLTMMNVVGPLIDVTGR
MTFLSQPPGVRTRLMTAYIVLMFIGGGVASWAATFVYEQGGWAATTKLTLVLSALLVMLSFLSLVIFGKDAGRSKT
>Mature_395_residues
TRRDLLLLTLAGAVVTANAYYIHPIIALVAKDFGVSASAIGLVPALNQIALALGIFFLLPLGDRFSNRQLAIVFAAGQFV
GLLMMAFGGSFWLFVAGSTFLGFSTITPYLLPAYASKRVAPGDLGRVTATLTTGVIAGILLARVGAGWVGEHLGWRTVYY
IAAGVMLVITLLLPRIMDGREKSEDQAPAGSYFGLVLSMFPIVRRHPEVLISGTIQGIGFGVFLSVWLTLGLHLTSPEMG
YGADTVGYLAGLALLNLLTTAPLGAWADRTGPRKARLIISIVQFSGVCLLGVFGHSLWLLMIPLTMMNVVGPLIDVTGRM
TFLSQPPGVRTRLMTAYIVLMFIGGGVASWAATFVYEQGGWAATTKLTLVLSALLVMLSFLSLVIFGKDAGRSKT

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the major facilitator superfamily [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR020846
- InterPro:   IPR011701
- InterPro:   IPR016196 [H]

Pfam domain/function: PF07690 MFS_1 [H]

EC number: NA

Molecular weight: Translated: 42146; Mature: 42015

Theoretical pI: Translated: 10.25; Mature: 10.25

Prosite motif: PS50850 MFS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
3.3 %Met     (Mature Protein)
3.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTRRDLLLLTLAGAVVTANAYYIHPIIALVAKDFGVSASAIGLVPALNQIALALGIFFLL
CCCCCEEHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHH
PLGDRFSNRQLAIVFAAGQFVGLLMMAFGGSFWLFVAGSTFLGFSTITPYLLPAYASKRV
CCCCCCCCCEEEEEEECHHHHHHHHHHHCCCEEEEEECCHHHCHHHHHHHHHHHHHCCCC
APGDLGRVTATLTTGVIAGILLARVGAGWVGEHLGWRTVYYIAAGVMLVITLLLPRIMDG
CCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCC
REKSEDQAPAGSYFGLVLSMFPIVRRHPEVLISGTIQGIGFGVFLSVWLTLGLHLTSPEM
CCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEECCHHHHHHHHHHHHHHHHCCEECCCCC
GYGADTVGYLAGLALLNLLTTAPLGAWADRTGPRKARLIISIVQFSGVCLLGVFGHSLWL
CCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHH
LMIPLTMMNVVGPLIDVTGRMTFLSQPPGVRTRLMTAYIVLMFIGGGVASWAATFVYEQG
HHHHHHHHHHHHHHHHHCCCEEEECCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHEECC
GWAATTKLTLVLSALLVMLSFLSLVIFGKDAGRSKT
CCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
>Mature Secondary Structure 
TRRDLLLLTLAGAVVTANAYYIHPIIALVAKDFGVSASAIGLVPALNQIALALGIFFLL
CCCCEEHHHHHHHHHHCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHH
PLGDRFSNRQLAIVFAAGQFVGLLMMAFGGSFWLFVAGSTFLGFSTITPYLLPAYASKRV
CCCCCCCCCEEEEEEECHHHHHHHHHHHCCCEEEEEECCHHHCHHHHHHHHHHHHHCCCC
APGDLGRVTATLTTGVIAGILLARVGAGWVGEHLGWRTVYYIAAGVMLVITLLLPRIMDG
CCCCCHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCC
REKSEDQAPAGSYFGLVLSMFPIVRRHPEVLISGTIQGIGFGVFLSVWLTLGLHLTSPEM
CCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEECCHHHHHHHHHHHHHHHHCCEECCCCC
GYGADTVGYLAGLALLNLLTTAPLGAWADRTGPRKARLIISIVQFSGVCLLGVFGHSLWL
CCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHH
LMIPLTMMNVVGPLIDVTGRMTFLSQPPGVRTRLMTAYIVLMFIGGGVASWAATFVYEQG
HHHHHHHHHHHHHHHHHCCCEEEECCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHEECC
GWAATTKLTLVLSALLVMLSFLSLVIFGKDAGRSKT
CCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]