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The map label for this gene is blc [H]

Identifier: 114798121

GI number: 114798121

Start: 2505275

End: 2505823

Strand: Reverse

Name: blc [H]

Synonym: HNE_2399

Alternate gene names: 114798121

Gene position: 2505823-2505275 (Counterclockwise)

Preceding gene: 114797146

Following gene: 114798152

Centisome position: 67.63

GC content: 57.56

Gene sequence:

>549_bases
ATGAAACTCAAACACATGATGGCCCCGCTTTCCGCCTTGGCCCTCGCGGCATGCATTTCACAGCCCGATTATCGCGCTTC
TGACGCAGAACTGCCAACCGTCTCTGAAGTCGATCTTGATCGGTATGTGGGCAAATGGCACGAGATCGCGCGCTATCCAA
ACTCGTTTGAGCGGGGATGTGTGACGGCTACGGCTGAATATGCGCAACTGCCCGACGGCAAGATTTCGGTGACCAACAGC
TGCGCCAAGGAAGACGGCAAGACGGATGTGGCCGAAGGCACAGCACGCGTGGTTGAAGGCTCCAATGGGGCTAAGCTGAA
GGTCAAATTTGCGCCGTCCTGGGTGCCTTTTGCGGAAGGCGACTATTGGGTGCTTCACCTTGAGCCAGACTATTCTGCCG
TGCTGGTCGGCGCGCCGAGCGGGAAATATCTCTGGATACTGGCACGCGACCCCGCGCCGCCCAAGGCGATGATTGACCGT
ATCCTGAAGAAAGCAGAAGACTTGGGGTTTGAAACGGACCCCCTGACTTACGCCGGAAATCCGGCGTAA

Upstream 100 bases:

>100_bases
TTGGTTCAGCTTCGCGGTGACGAAGACCAGGCAACCTTGGGCATGTTCATCAGTTATACCTTCCAATGATGGATTTTTTC
CGTGAGGATCGAGAAGAGAT

Downstream 100 bases:

>100_bases
ATCAGGGATTTTCTCACCCCTTCAGGCTGGGCAGGTCCAGGCCATGTTCGCGTGCACTGTCGATGGCAATGTCATAGCCG
GCATCGGCATGGCGCATGAC

Product: lipocalin-like lipoprotein

Products: NA

Alternate protein names: Protein vlp [H]

Number of amino acids: Translated: 182; Mature: 182

Protein sequence:

>182_residues
MKLKHMMAPLSALALAACISQPDYRASDAELPTVSEVDLDRYVGKWHEIARYPNSFERGCVTATAEYAQLPDGKISVTNS
CAKEDGKTDVAEGTARVVEGSNGAKLKVKFAPSWVPFAEGDYWVLHLEPDYSAVLVGAPSGKYLWILARDPAPPKAMIDR
ILKKAEDLGFETDPLTYAGNPA

Sequences:

>Translated_182_residues
MKLKHMMAPLSALALAACISQPDYRASDAELPTVSEVDLDRYVGKWHEIARYPNSFERGCVTATAEYAQLPDGKISVTNS
CAKEDGKTDVAEGTARVVEGSNGAKLKVKFAPSWVPFAEGDYWVLHLEPDYSAVLVGAPSGKYLWILARDPAPPKAMIDR
ILKKAEDLGFETDPLTYAGNPA
>Mature_182_residues
MKLKHMMAPLSALALAACISQPDYRASDAELPTVSEVDLDRYVGKWHEIARYPNSFERGCVTATAEYAQLPDGKISVTNS
CAKEDGKTDVAEGTARVVEGSNGAKLKVKFAPSWVPFAEGDYWVLHLEPDYSAVLVGAPSGKYLWILARDPAPPKAMIDR
ILKKAEDLGFETDPLTYAGNPA

Specific function: Involved in the storage or transport of lipids necessary for membrane maintenance under stressful conditions. Displays a binding preference for lysophospholipids [H]

COG id: COG3040

COG function: function code M; Bacterial lipocalin

Gene ontology:

Cell location: Cell outer membrane; Lipid-anchor [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the calycin superfamily. Lipocalin family [H]

Homologues:

Organism=Homo sapiens, GI4502163, Length=137, Percent_Identity=33.5766423357664, Blast_Score=75, Evalue=2e-14,
Organism=Escherichia coli, GI1790592, Length=183, Percent_Identity=32.7868852459016, Blast_Score=85, Evalue=3e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012674
- InterPro:   IPR011038
- InterPro:   IPR013208
- InterPro:   IPR022271
- InterPro:   IPR002446
- InterPro:   IPR022272 [H]

Pfam domain/function: PF08212 Lipocalin_2 [H]

EC number: NA

Molecular weight: Translated: 19787; Mature: 19787

Theoretical pI: Translated: 5.05; Mature: 5.05

Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS00213 LIPOCALIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
3.8 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKLKHMMAPLSALALAACISQPDYRASDAELPTVSEVDLDRYVGKWHEIARYPNSFERGC
CCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCHHCCC
VTATAEYAQLPDGKISVTNSCAKEDGKTDVAEGTARVVEGSNGAKLKVKFAPSWVPFAEG
EEECHHHHHCCCCCEEECCCHHHCCCCCCHHCCCEEEEECCCCCEEEEEECCCCCCCCCC
DYWVLHLEPDYSAVLVGAPSGKYLWILARDPAPPKAMIDRILKKAEDLGFETDPLTYAGN
CEEEEEECCCCCEEEEECCCCCEEEEEECCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCC
PA
CC
>Mature Secondary Structure
MKLKHMMAPLSALALAACISQPDYRASDAELPTVSEVDLDRYVGKWHEIARYPNSFERGC
CCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCHHCCC
VTATAEYAQLPDGKISVTNSCAKEDGKTDVAEGTARVVEGSNGAKLKVKFAPSWVPFAEG
EEECHHHHHCCCCCEEECCCHHHCCCCCCHHCCCEEEEECCCCCEEEEEECCCCCCCCCC
DYWVLHLEPDYSAVLVGAPSGKYLWILARDPAPPKAMIDRILKKAEDLGFETDPLTYAGN
CEEEEEECCCCCEEEEECCCCCEEEEEECCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCC
PA
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8514410; 10952301 [H]