Definition Hyphomonas neptunium ATCC 15444 chromosome, complete genome.
Accession NC_008358
Length 3,705,021

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The map label for this gene is 114798114

Identifier: 114798114

GI number: 114798114

Start: 1482988

End: 1484316

Strand: Reverse

Name: 114798114

Synonym: HNE_1456

Alternate gene names: NA

Gene position: 1484316-1482988 (Counterclockwise)

Preceding gene: 114798482

Following gene: 114799129

Centisome position: 40.06

GC content: 64.64

Gene sequence:

>1329_bases
ATGCCCCGGAGCGCCTGTTCAGGCGGCAGCGCGTTTCCGGCGCACGCGGTCCAGGATCTCTTCCTCGGTCCCGCGCAGGT
CATACACGCCGACCAGCCGCACCTCGTCGCCATGGGCTTCGTCGGCGGCGACCTCCAGGTCGAGCGCCACATCATCTTCG
CAGAAGTCGCAGAAATGGACAAAATCGACCGTGTCGGAGAATACGAGAAGCCATTTCGCGCGGCGATCAATTCCCGAACG
CACCCAGCTGCGGAACTCATCGGAAATATCAGAAAACCCACTCATGATGACCACCTTCGCTGTTCGCCCTGCTCTGCGTT
CCGTGTATGTTCTTTTGAAAAAAGAGTCAACAATTCCTTACCGAAATTCTGTCGCCGCGCCGACCGGCGCCGGGTAAAGA
GATCCGGTATCCCTTCCCCGTCTGTCCGGAGCCTCGTCATGTTTTACCGCATCCTGGTCCTTGCCACCGCCTTGCTGGTC
TCGGCCTGCCAGACACCGGCTCCTCCGCCTGCGGATCAGGAGGCGGGTCCCTTGCGGATCGCCGCCTGGAACACCGAACA
CCTCACGGCGGTTTCCGGCGCGGGCTGCTTCCCCCGGGACGAGGCGGCGCTGGATCTTATTGCCGACTATATCACCCGCG
TGGACGCGGACATCTGGCTGCTCCAGGAAGTCGATGGGGATGGCGCCCTGGCGCGCGTCTTCGGCGACGGATGGACCTTT
CATGTCGAACAAAGGGCCGGCGGCGAAACGTATCCGCTCTGCCGCGGCCGCGATGACGGTACCCGCCTGCGTGCCCAGAA
TACCGCCATCGCCGTGCGCGACGGCATCACCCATGACCGGCTCCCCGACCTCGCCGCGCTCGATCTGACCGGTGAGGGCC
GCACCCGCTATGGCGTGGCGATCACGCTGCCCGGCCCGGTCCCGACCGACATTATGAGCGTGCATCTCACATCCGGCTGT
TTTTCCGGGGACACGTCGGTGCGCTGCCCCGCGCTGTTTGATCAGGCAGACGTCCTGGAGGCGTGGATCGATCAGCGCAG
CGCTGCCGGGCGCGCGGTCATCGTCGGCGGCGATTTCAACCGCCGCCTGGAAGCGGAAGATGATCCGGTCTGGACCGGCC
TCAATGATGGCACGCCGGCAGGGCTCCATATCGCCGGCGCCGGAACCGGCCCGTCCTGCGACCCGCGTTACAGGGAATTT
ATCGATTTCCTCCTGCTGAGCGACACCGCCCTCACCCGAATGGTCGCGGGCAGCTTCCGGGAAACGACCTATGACACCCC
CGCCCGGCCCTCCGATCACTGCCCGATCTCGCTCAGTATAGCGCGCTGA

Upstream 100 bases:

>100_bases
TGTTCTGAGTTCCCCCCAAAGGAGCGCGCGCCAGCGCCTGCACCAGAGGCGGCATCACAGGAGACCGCTCCGGCTACGGA
TTGTGTGAGGCGGTTCGCCC

Downstream 100 bases:

>100_bases
CGGCCCTCGCGGGTCTGCGCTGGCCCGGTTCAGCCAAAGGACCGCCCTTCATACCAGTATCCCATAGGGCTTCCCCGATC
CCATTGACCGGGATGCCCCT

Product: endonuclease/exonuclease/phosphatase family protein

Products: NA

Alternate protein names: Endonuclease/Exonuclease/Phosphatase Family Protein; Metal-Dependent Hydrolase; Endonuclease/Exonuclease/Phosphatase Family

Number of amino acids: Translated: 442; Mature: 441

Protein sequence:

>442_residues
MPRSACSGGSAFPAHAVQDLFLGPAQVIHADQPHLVAMGFVGGDLQVERHIIFAEVAEMDKIDRVGEYEKPFRAAINSRT
HPAAELIGNIRKPTHDDHLRCSPCSAFRVCSFEKRVNNSLPKFCRRADRRRVKRSGIPSPSVRSLVMFYRILVLATALLV
SACQTPAPPPADQEAGPLRIAAWNTEHLTAVSGAGCFPRDEAALDLIADYITRVDADIWLLQEVDGDGALARVFGDGWTF
HVEQRAGGETYPLCRGRDDGTRLRAQNTAIAVRDGITHDRLPDLAALDLTGEGRTRYGVAITLPGPVPTDIMSVHLTSGC
FSGDTSVRCPALFDQADVLEAWIDQRSAAGRAVIVGGDFNRRLEAEDDPVWTGLNDGTPAGLHIAGAGTGPSCDPRYREF
IDFLLLSDTALTRMVAGSFRETTYDTPARPSDHCPISLSIAR

Sequences:

>Translated_442_residues
MPRSACSGGSAFPAHAVQDLFLGPAQVIHADQPHLVAMGFVGGDLQVERHIIFAEVAEMDKIDRVGEYEKPFRAAINSRT
HPAAELIGNIRKPTHDDHLRCSPCSAFRVCSFEKRVNNSLPKFCRRADRRRVKRSGIPSPSVRSLVMFYRILVLATALLV
SACQTPAPPPADQEAGPLRIAAWNTEHLTAVSGAGCFPRDEAALDLIADYITRVDADIWLLQEVDGDGALARVFGDGWTF
HVEQRAGGETYPLCRGRDDGTRLRAQNTAIAVRDGITHDRLPDLAALDLTGEGRTRYGVAITLPGPVPTDIMSVHLTSGC
FSGDTSVRCPALFDQADVLEAWIDQRSAAGRAVIVGGDFNRRLEAEDDPVWTGLNDGTPAGLHIAGAGTGPSCDPRYREF
IDFLLLSDTALTRMVAGSFRETTYDTPARPSDHCPISLSIAR
>Mature_441_residues
PRSACSGGSAFPAHAVQDLFLGPAQVIHADQPHLVAMGFVGGDLQVERHIIFAEVAEMDKIDRVGEYEKPFRAAINSRTH
PAAELIGNIRKPTHDDHLRCSPCSAFRVCSFEKRVNNSLPKFCRRADRRRVKRSGIPSPSVRSLVMFYRILVLATALLVS
ACQTPAPPPADQEAGPLRIAAWNTEHLTAVSGAGCFPRDEAALDLIADYITRVDADIWLLQEVDGDGALARVFGDGWTFH
VEQRAGGETYPLCRGRDDGTRLRAQNTAIAVRDGITHDRLPDLAALDLTGEGRTRYGVAITLPGPVPTDIMSVHLTSGCF
SGDTSVRCPALFDQADVLEAWIDQRSAAGRAVIVGGDFNRRLEAEDDPVWTGLNDGTPAGLHIAGAGTGPSCDPRYREFI
DFLLLSDTALTRMVAGSFRETTYDTPARPSDHCPISLSIAR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 47946; Mature: 47814

Theoretical pI: Translated: 6.19; Mature: 6.19

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.7 %Cys     (Translated Protein)
1.4 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
2.7 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
3.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPRSACSGGSAFPAHAVQDLFLGPAQVIHADQPHLVAMGFVGGDLQVERHIIFAEVAEMD
CCCCCCCCCCCCHHHHHHHHHCCCHHEEECCCCCEEEEEEECCCEEEEHEEHHHHHHHHH
KIDRVGEYEKPFRAAINSRTHPAAELIGNIRKPTHDDHLRCSPCSAFRVCSFEKRVNNSL
HHHHCCCCCHHHHHHHCCCCCHHHHHHHHCCCCCCCCCCEECCCCHHHHHHHHHHHCCHH
PKFCRRADRRRVKRSGIPSPSVRSLVMFYRILVLATALLVSACQTPAPPPADQEAGPLRI
HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEE
AAWNTEHLTAVSGAGCFPRDEAALDLIADYITRVDADIWLLQEVDGDGALARVFGDGWTF
EEECCCCEEEECCCCCCCCHHHHHHHHHHHHHHCCCCEEEEEEECCCCCEEEEECCCEEE
HVEQRAGGETYPLCRGRDDGTRLRAQNTAIAVRDGITHDRLPDLAALDLTGEGRTRYGVA
EEEECCCCCCCCCCCCCCCCCEEEECCCEEEEECCCCCCCCCCCEEEEECCCCCEEEEEE
ITLPGPVPTDIMSVHLTSGCFSGDTSVRCPALFDQADVLEAWIDQRSAAGRAVIVGGDFN
EEECCCCCCHHEEEEEECCCCCCCCCEECCHHHCHHHHHHHHHHHHCCCCCEEEECCCCC
RRLEAEDDPVWTGLNDGTPAGLHIAGAGTGPSCDPRYREFIDFLLLSDTALTRMVAGSFR
CCCCCCCCCEEECCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHH
ETTYDTPARPSDHCPISLSIAR
HCCCCCCCCCCCCCCEEEEECC
>Mature Secondary Structure 
PRSACSGGSAFPAHAVQDLFLGPAQVIHADQPHLVAMGFVGGDLQVERHIIFAEVAEMD
CCCCCCCCCCCHHHHHHHHHCCCHHEEECCCCCEEEEEEECCCEEEEHEEHHHHHHHHH
KIDRVGEYEKPFRAAINSRTHPAAELIGNIRKPTHDDHLRCSPCSAFRVCSFEKRVNNSL
HHHHCCCCCHHHHHHHCCCCCHHHHHHHHCCCCCCCCCCEECCCCHHHHHHHHHHHCCHH
PKFCRRADRRRVKRSGIPSPSVRSLVMFYRILVLATALLVSACQTPAPPPADQEAGPLRI
HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEE
AAWNTEHLTAVSGAGCFPRDEAALDLIADYITRVDADIWLLQEVDGDGALARVFGDGWTF
EEECCCCEEEECCCCCCCCHHHHHHHHHHHHHHCCCCEEEEEEECCCCCEEEEECCCEEE
HVEQRAGGETYPLCRGRDDGTRLRAQNTAIAVRDGITHDRLPDLAALDLTGEGRTRYGVA
EEEECCCCCCCCCCCCCCCCCEEEECCCEEEEECCCCCCCCCCCEEEEECCCCCEEEEEE
ITLPGPVPTDIMSVHLTSGCFSGDTSVRCPALFDQADVLEAWIDQRSAAGRAVIVGGDFN
EEECCCCCCHHEEEEEECCCCCCCCCEECCHHHCHHHHHHHHHHHHCCCCCEEEECCCCC
RRLEAEDDPVWTGLNDGTPAGLHIAGAGTGPSCDPRYREFIDFLLLSDTALTRMVAGSFR
CCCCCCCCCEEECCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHH
ETTYDTPARPSDHCPISLSIAR
HCCCCCCCCCCCCCCEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA