| Definition | Hyphomonas neptunium ATCC 15444 chromosome, complete genome. |
|---|---|
| Accession | NC_008358 |
| Length | 3,705,021 |
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The map label for this gene is 114798114
Identifier: 114798114
GI number: 114798114
Start: 1482988
End: 1484316
Strand: Reverse
Name: 114798114
Synonym: HNE_1456
Alternate gene names: NA
Gene position: 1484316-1482988 (Counterclockwise)
Preceding gene: 114798482
Following gene: 114799129
Centisome position: 40.06
GC content: 64.64
Gene sequence:
>1329_bases ATGCCCCGGAGCGCCTGTTCAGGCGGCAGCGCGTTTCCGGCGCACGCGGTCCAGGATCTCTTCCTCGGTCCCGCGCAGGT CATACACGCCGACCAGCCGCACCTCGTCGCCATGGGCTTCGTCGGCGGCGACCTCCAGGTCGAGCGCCACATCATCTTCG CAGAAGTCGCAGAAATGGACAAAATCGACCGTGTCGGAGAATACGAGAAGCCATTTCGCGCGGCGATCAATTCCCGAACG CACCCAGCTGCGGAACTCATCGGAAATATCAGAAAACCCACTCATGATGACCACCTTCGCTGTTCGCCCTGCTCTGCGTT CCGTGTATGTTCTTTTGAAAAAAGAGTCAACAATTCCTTACCGAAATTCTGTCGCCGCGCCGACCGGCGCCGGGTAAAGA GATCCGGTATCCCTTCCCCGTCTGTCCGGAGCCTCGTCATGTTTTACCGCATCCTGGTCCTTGCCACCGCCTTGCTGGTC TCGGCCTGCCAGACACCGGCTCCTCCGCCTGCGGATCAGGAGGCGGGTCCCTTGCGGATCGCCGCCTGGAACACCGAACA CCTCACGGCGGTTTCCGGCGCGGGCTGCTTCCCCCGGGACGAGGCGGCGCTGGATCTTATTGCCGACTATATCACCCGCG TGGACGCGGACATCTGGCTGCTCCAGGAAGTCGATGGGGATGGCGCCCTGGCGCGCGTCTTCGGCGACGGATGGACCTTT CATGTCGAACAAAGGGCCGGCGGCGAAACGTATCCGCTCTGCCGCGGCCGCGATGACGGTACCCGCCTGCGTGCCCAGAA TACCGCCATCGCCGTGCGCGACGGCATCACCCATGACCGGCTCCCCGACCTCGCCGCGCTCGATCTGACCGGTGAGGGCC GCACCCGCTATGGCGTGGCGATCACGCTGCCCGGCCCGGTCCCGACCGACATTATGAGCGTGCATCTCACATCCGGCTGT TTTTCCGGGGACACGTCGGTGCGCTGCCCCGCGCTGTTTGATCAGGCAGACGTCCTGGAGGCGTGGATCGATCAGCGCAG CGCTGCCGGGCGCGCGGTCATCGTCGGCGGCGATTTCAACCGCCGCCTGGAAGCGGAAGATGATCCGGTCTGGACCGGCC TCAATGATGGCACGCCGGCAGGGCTCCATATCGCCGGCGCCGGAACCGGCCCGTCCTGCGACCCGCGTTACAGGGAATTT ATCGATTTCCTCCTGCTGAGCGACACCGCCCTCACCCGAATGGTCGCGGGCAGCTTCCGGGAAACGACCTATGACACCCC CGCCCGGCCCTCCGATCACTGCCCGATCTCGCTCAGTATAGCGCGCTGA
Upstream 100 bases:
>100_bases TGTTCTGAGTTCCCCCCAAAGGAGCGCGCGCCAGCGCCTGCACCAGAGGCGGCATCACAGGAGACCGCTCCGGCTACGGA TTGTGTGAGGCGGTTCGCCC
Downstream 100 bases:
>100_bases CGGCCCTCGCGGGTCTGCGCTGGCCCGGTTCAGCCAAAGGACCGCCCTTCATACCAGTATCCCATAGGGCTTCCCCGATC CCATTGACCGGGATGCCCCT
Product: endonuclease/exonuclease/phosphatase family protein
Products: NA
Alternate protein names: Endonuclease/Exonuclease/Phosphatase Family Protein; Metal-Dependent Hydrolase; Endonuclease/Exonuclease/Phosphatase Family
Number of amino acids: Translated: 442; Mature: 441
Protein sequence:
>442_residues MPRSACSGGSAFPAHAVQDLFLGPAQVIHADQPHLVAMGFVGGDLQVERHIIFAEVAEMDKIDRVGEYEKPFRAAINSRT HPAAELIGNIRKPTHDDHLRCSPCSAFRVCSFEKRVNNSLPKFCRRADRRRVKRSGIPSPSVRSLVMFYRILVLATALLV SACQTPAPPPADQEAGPLRIAAWNTEHLTAVSGAGCFPRDEAALDLIADYITRVDADIWLLQEVDGDGALARVFGDGWTF HVEQRAGGETYPLCRGRDDGTRLRAQNTAIAVRDGITHDRLPDLAALDLTGEGRTRYGVAITLPGPVPTDIMSVHLTSGC FSGDTSVRCPALFDQADVLEAWIDQRSAAGRAVIVGGDFNRRLEAEDDPVWTGLNDGTPAGLHIAGAGTGPSCDPRYREF IDFLLLSDTALTRMVAGSFRETTYDTPARPSDHCPISLSIAR
Sequences:
>Translated_442_residues MPRSACSGGSAFPAHAVQDLFLGPAQVIHADQPHLVAMGFVGGDLQVERHIIFAEVAEMDKIDRVGEYEKPFRAAINSRT HPAAELIGNIRKPTHDDHLRCSPCSAFRVCSFEKRVNNSLPKFCRRADRRRVKRSGIPSPSVRSLVMFYRILVLATALLV SACQTPAPPPADQEAGPLRIAAWNTEHLTAVSGAGCFPRDEAALDLIADYITRVDADIWLLQEVDGDGALARVFGDGWTF HVEQRAGGETYPLCRGRDDGTRLRAQNTAIAVRDGITHDRLPDLAALDLTGEGRTRYGVAITLPGPVPTDIMSVHLTSGC FSGDTSVRCPALFDQADVLEAWIDQRSAAGRAVIVGGDFNRRLEAEDDPVWTGLNDGTPAGLHIAGAGTGPSCDPRYREF IDFLLLSDTALTRMVAGSFRETTYDTPARPSDHCPISLSIAR >Mature_441_residues PRSACSGGSAFPAHAVQDLFLGPAQVIHADQPHLVAMGFVGGDLQVERHIIFAEVAEMDKIDRVGEYEKPFRAAINSRTH PAAELIGNIRKPTHDDHLRCSPCSAFRVCSFEKRVNNSLPKFCRRADRRRVKRSGIPSPSVRSLVMFYRILVLATALLVS ACQTPAPPPADQEAGPLRIAAWNTEHLTAVSGAGCFPRDEAALDLIADYITRVDADIWLLQEVDGDGALARVFGDGWTFH VEQRAGGETYPLCRGRDDGTRLRAQNTAIAVRDGITHDRLPDLAALDLTGEGRTRYGVAITLPGPVPTDIMSVHLTSGCF SGDTSVRCPALFDQADVLEAWIDQRSAAGRAVIVGGDFNRRLEAEDDPVWTGLNDGTPAGLHIAGAGTGPSCDPRYREFI DFLLLSDTALTRMVAGSFRETTYDTPARPSDHCPISLSIAR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 47946; Mature: 47814
Theoretical pI: Translated: 6.19; Mature: 6.19
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.7 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 2.7 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPRSACSGGSAFPAHAVQDLFLGPAQVIHADQPHLVAMGFVGGDLQVERHIIFAEVAEMD CCCCCCCCCCCCHHHHHHHHHCCCHHEEECCCCCEEEEEEECCCEEEEHEEHHHHHHHHH KIDRVGEYEKPFRAAINSRTHPAAELIGNIRKPTHDDHLRCSPCSAFRVCSFEKRVNNSL HHHHCCCCCHHHHHHHCCCCCHHHHHHHHCCCCCCCCCCEECCCCHHHHHHHHHHHCCHH PKFCRRADRRRVKRSGIPSPSVRSLVMFYRILVLATALLVSACQTPAPPPADQEAGPLRI HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEE AAWNTEHLTAVSGAGCFPRDEAALDLIADYITRVDADIWLLQEVDGDGALARVFGDGWTF EEECCCCEEEECCCCCCCCHHHHHHHHHHHHHHCCCCEEEEEEECCCCCEEEEECCCEEE HVEQRAGGETYPLCRGRDDGTRLRAQNTAIAVRDGITHDRLPDLAALDLTGEGRTRYGVA EEEECCCCCCCCCCCCCCCCCEEEECCCEEEEECCCCCCCCCCCEEEEECCCCCEEEEEE ITLPGPVPTDIMSVHLTSGCFSGDTSVRCPALFDQADVLEAWIDQRSAAGRAVIVGGDFN EEECCCCCCHHEEEEEECCCCCCCCCEECCHHHCHHHHHHHHHHHHCCCCCEEEECCCCC RRLEAEDDPVWTGLNDGTPAGLHIAGAGTGPSCDPRYREFIDFLLLSDTALTRMVAGSFR CCCCCCCCCEEECCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHH ETTYDTPARPSDHCPISLSIAR HCCCCCCCCCCCCCCEEEEECC >Mature Secondary Structure PRSACSGGSAFPAHAVQDLFLGPAQVIHADQPHLVAMGFVGGDLQVERHIIFAEVAEMD CCCCCCCCCCCHHHHHHHHHCCCHHEEECCCCCEEEEEEECCCEEEEHEEHHHHHHHHH KIDRVGEYEKPFRAAINSRTHPAAELIGNIRKPTHDDHLRCSPCSAFRVCSFEKRVNNSL HHHHCCCCCHHHHHHHCCCCCHHHHHHHHCCCCCCCCCCEECCCCHHHHHHHHHHHCCHH PKFCRRADRRRVKRSGIPSPSVRSLVMFYRILVLATALLVSACQTPAPPPADQEAGPLRI HHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCEEE AAWNTEHLTAVSGAGCFPRDEAALDLIADYITRVDADIWLLQEVDGDGALARVFGDGWTF EEECCCCEEEECCCCCCCCHHHHHHHHHHHHHHCCCCEEEEEEECCCCCEEEEECCCEEE HVEQRAGGETYPLCRGRDDGTRLRAQNTAIAVRDGITHDRLPDLAALDLTGEGRTRYGVA EEEECCCCCCCCCCCCCCCCCEEEECCCEEEEECCCCCCCCCCCEEEEECCCCCEEEEEE ITLPGPVPTDIMSVHLTSGCFSGDTSVRCPALFDQADVLEAWIDQRSAAGRAVIVGGDFN EEECCCCCCHHEEEEEECCCCCCCCCEECCHHHCHHHHHHHHHHHHCCCCCEEEECCCCC RRLEAEDDPVWTGLNDGTPAGLHIAGAGTGPSCDPRYREFIDFLLLSDTALTRMVAGSFR CCCCCCCCCEEECCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHH ETTYDTPARPSDHCPISLSIAR HCCCCCCCCCCCCCCEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA