| Definition | Hyphomonas neptunium ATCC 15444 chromosome, complete genome. |
|---|---|
| Accession | NC_008358 |
| Length | 3,705,021 |
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The map label for this gene is pksS [H]
Identifier: 114798086
GI number: 114798086
Start: 1377163
End: 1378389
Strand: Direct
Name: pksS [H]
Synonym: HNE_1343
Alternate gene names: 114798086
Gene position: 1377163-1378389 (Clockwise)
Preceding gene: 114799109
Following gene: 114797160
Centisome position: 37.17
GC content: 67.07
Gene sequence:
>1227_bases ATGCCTGCCGCGCCCGCCCTGCAAAAACTGACAGTTGGGGGGCAAGCCTTCCTGCGCGATCCCCACGCCCGTCTGACCTG CGCGCTGGAGGCCGGCCCGCTGGCGCAGACGCGCCTGCTGGTGTTTGGCAGGATCACCGCCGTGCTGAGCCATGCCGGCA TCACCGAGATGATGAAGGATGCCGGGCGCTTTACGGTGGACGCCCGCAATGCGGGGCATTCTTCGGCGCTGGGCATGCCA TTCCTGCCCAAATCCCTGAAATTACTGGCCGAAAACCTGCTCACCCTGGACGAGCCCCACCATACCCGCCTGCGGCGGCT GGCGGACGCCCCGTTCCGGCGAGCGGCGATTGAGGGCATGCGCCCGGCGGTCGAGGCCCAATGCGCGCGGCTGCTGGATG AGATGGCGCGGTCTGGGAACACCGATCTGGTCTCGGGCCTCTGCCGGCCCCTGCCGATCCAGGTGATCTGCGACCTGCTG GGGCTGTCAGATGCGCGCCGCGAAGGGCTGGTACGGGTGTTTTCCGGCTTTTCGGGCGCGGGCACCCTGGAGGCCATCGG CGTGTTAATGAAGACCGGCTGGGTGCAGAGCGAGCTGCGCCAGGAGTTTGCCGAGGTGCGCGCCGTCCCGCGCCCCGGCC TGATTACAGAGCTGGTCCATGCCGAAGCCGAAGACGGCCGCCTGACGGAGGATGAACTCCTCTCGATGGTCTTCATCCTG TTTGCGGCAGGCCATGAGACGACGACGCATTTCATCTCTTCCAGCGTCTGGACGATGCTGACGCAGCCCGGCGCGCGCGA GGCCATCGCGGCGATGGATGGGGAGGCGCTGAACGTAGCGGTCGACGAGCTGATGCGCTTCAGCGGCCCGGTGCAGTTCA CCAAGCCGCGCTATGCGCGTGAGGATACCGAGTTTCTGGGCCAGCCGATCAAGCGCGGGAAGCCTGTGATGGCGCTGCTC GCGGCGGGCAATCTGGACCCGGCGGCGTTTGACGATCCCCTGACGCTGAACCTTGGCCGCCGGCCCAACCGTCATCTCAG CTGGGGATGGGGCCCGCATCTCTGCCTCGGCATGCATCTGGCCAAGGCTGAATGCGAGATTGCGCTGCGCCAGATTCTGG AGCGCTGGCCGGGCGTGGAGATCGACGGCGACCCTGCCGCGCTCAAATGGAGCCAGCGGCCGGGCGTGCGAGGGCTTGCC CGGTTGCCGTTGCAGTTAAAATCCTGA
Upstream 100 bases:
>100_bases CCGCCGGGCCGAAGCGCTGAGGGCGAATCTGCGCCGCCGCAAGGCCGCCGCCCGCAAGGATGCCGCGCCCCCGCCGGATG GAAAATCAGGCTAGCGCCCC
Downstream 100 bases:
>100_bases AACCACACACAATCTGGCCCTTACAAAGCCGCGAAGCACGGTATATCTGCGGCCATGGATCGTCTTCACATCATTGGCGG CAGCCCTCTCAGCGGCCGCA
Product: cytochrome P450 family protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 408; Mature: 407
Protein sequence:
>408_residues MPAAPALQKLTVGGQAFLRDPHARLTCALEAGPLAQTRLLVFGRITAVLSHAGITEMMKDAGRFTVDARNAGHSSALGMP FLPKSLKLLAENLLTLDEPHHTRLRRLADAPFRRAAIEGMRPAVEAQCARLLDEMARSGNTDLVSGLCRPLPIQVICDLL GLSDARREGLVRVFSGFSGAGTLEAIGVLMKTGWVQSELRQEFAEVRAVPRPGLITELVHAEAEDGRLTEDELLSMVFIL FAAGHETTTHFISSSVWTMLTQPGAREAIAAMDGEALNVAVDELMRFSGPVQFTKPRYAREDTEFLGQPIKRGKPVMALL AAGNLDPAAFDDPLTLNLGRRPNRHLSWGWGPHLCLGMHLAKAECEIALRQILERWPGVEIDGDPAALKWSQRPGVRGLA RLPLQLKS
Sequences:
>Translated_408_residues MPAAPALQKLTVGGQAFLRDPHARLTCALEAGPLAQTRLLVFGRITAVLSHAGITEMMKDAGRFTVDARNAGHSSALGMP FLPKSLKLLAENLLTLDEPHHTRLRRLADAPFRRAAIEGMRPAVEAQCARLLDEMARSGNTDLVSGLCRPLPIQVICDLL GLSDARREGLVRVFSGFSGAGTLEAIGVLMKTGWVQSELRQEFAEVRAVPRPGLITELVHAEAEDGRLTEDELLSMVFIL FAAGHETTTHFISSSVWTMLTQPGAREAIAAMDGEALNVAVDELMRFSGPVQFTKPRYAREDTEFLGQPIKRGKPVMALL AAGNLDPAAFDDPLTLNLGRRPNRHLSWGWGPHLCLGMHLAKAECEIALRQILERWPGVEIDGDPAALKWSQRPGVRGLA RLPLQLKS >Mature_407_residues PAAPALQKLTVGGQAFLRDPHARLTCALEAGPLAQTRLLVFGRITAVLSHAGITEMMKDAGRFTVDARNAGHSSALGMPF LPKSLKLLAENLLTLDEPHHTRLRRLADAPFRRAAIEGMRPAVEAQCARLLDEMARSGNTDLVSGLCRPLPIQVICDLLG LSDARREGLVRVFSGFSGAGTLEAIGVLMKTGWVQSELRQEFAEVRAVPRPGLITELVHAEAEDGRLTEDELLSMVFILF AAGHETTTHFISSSVWTMLTQPGAREAIAAMDGEALNVAVDELMRFSGPVQFTKPRYAREDTEFLGQPIKRGKPVMALLA AGNLDPAAFDDPLTLNLGRRPNRHLSWGWGPHLCLGMHLAKAECEIALRQILERWPGVEIDGDPAALKWSQRPGVRGLAR LPLQLKS
Specific function: Involved in the metabolism of the antibiotic polyketide bacillaene which is involved in secondary metabolism. The substrate is dihydrobacillaene [H]
COG id: COG2124
COG function: function code Q; Cytochrome P450
Gene ontology:
Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the cytochrome P450 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001128 - InterPro: IPR002397 - InterPro: IPR017972 [H]
Pfam domain/function: PF00067 p450 [H]
EC number: NA
Molecular weight: Translated: 44448; Mature: 44317
Theoretical pI: Translated: 7.61; Mature: 7.61
Prosite motif: PS00086 CYTOCHROME_P450
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 4.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPAAPALQKLTVGGQAFLRDPHARLTCALEAGPLAQTRLLVFGRITAVLSHAGITEMMKD CCCCCCHHHHHCCCHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHCCHHHHHHH AGRFTVDARNAGHSSALGMPFLPKSLKLLAENLLTLDEPHHTRLRRLADAPFRRAAIEGM CCCEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHCCHHHHHHHHCC RPAVEAQCARLLDEMARSGNTDLVSGLCRPLPIQVICDLLGLSDARREGLVRVFSGFSGA CHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCHHHHHHHHCCCHHHHHHHHHHHCCCCCC GTLEAIGVLMKTGWVQSELRQEFAEVRAVPRPGLITELVHAEAEDGRLTEDELLSMVFIL CHHHHHHHHHHHCHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCCCCCHHHHHHHHHHH FAAGHETTTHFISSSVWTMLTQPGAREAIAAMDGEALNVAVDELMRFSGPVQFTKPRYAR HHCCCCHHHHHHHHHHHHHHCCCCHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCCCC EDTEFLGQPIKRGKPVMALLAAGNLDPAAFDDPLTLNLGRRPNRHLSWGWGPHLCLGMHL CCHHHHCCHHHCCCCEEEEEECCCCCCCCCCCCEEEECCCCCCCCCCCCCCHHHHHHHHH AKAECEIALRQILERWPGVEIDGDPAALKWSQRPGVRGLARLPLQLKS HHHHHHHHHHHHHHHCCCCEECCCCCEEEECCCCCCCHHHHCCCCCCC >Mature Secondary Structure PAAPALQKLTVGGQAFLRDPHARLTCALEAGPLAQTRLLVFGRITAVLSHAGITEMMKD CCCCCHHHHHCCCHHHHCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHCCHHHHHHH AGRFTVDARNAGHSSALGMPFLPKSLKLLAENLLTLDEPHHTRLRRLADAPFRRAAIEGM CCCEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHCCHHHHHHHHCC RPAVEAQCARLLDEMARSGNTDLVSGLCRPLPIQVICDLLGLSDARREGLVRVFSGFSGA CHHHHHHHHHHHHHHHHCCCCHHHHHHCCCCCHHHHHHHHCCCHHHHHHHHHHHCCCCCC GTLEAIGVLMKTGWVQSELRQEFAEVRAVPRPGLITELVHAEAEDGRLTEDELLSMVFIL CHHHHHHHHHHHCHHHHHHHHHHHHHHCCCCCCHHHHHHHCCCCCCCCCHHHHHHHHHHH FAAGHETTTHFISSSVWTMLTQPGAREAIAAMDGEALNVAVDELMRFSGPVQFTKPRYAR HHCCCCHHHHHHHHHHHHHHCCCCHHHHHHHCCCCHHHHHHHHHHHHCCCCCCCCCCCCC EDTEFLGQPIKRGKPVMALLAAGNLDPAAFDDPLTLNLGRRPNRHLSWGWGPHLCLGMHL CCHHHHCCHHHCCCCEEEEEECCCCCCCCCCCCEEEECCCCCCCCCCCCCCHHHHHHHHH AKAECEIALRQILERWPGVEIDGDPAALKWSQRPGVRGLARLPLQLKS HHHHHHHHHHHHHHHCCCCEECCCCCEEEECCCCCCCHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 9384377 [H]