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The map label for this gene is atpF

Identifier: 114798056

GI number: 114798056

Start: 1992258

End: 1992827

Strand: Direct

Name: atpF

Synonym: HNE_1922

Alternate gene names: 114798056

Gene position: 1992258-1992827 (Clockwise)

Preceding gene: 114798353

Following gene: 114799588

Centisome position: 53.77

GC content: 67.19

Gene sequence:

>570_bases
ATGAAGAAGACCACGTCTCTCCTGATCGCCGCGCTCGCGGTTGCCCCGCTGGCCCATGCAGCAGAAGGCGGCTTCGTCGG
CGGCCTGATGTATGCAGCAACGGACCCGGTGACCTTTGTCGCCTTCCTGTGCATGGTCACCTTCCTCCTGATCGCCGCCC
GCATGGGCGCTTTCAAGACGATCCTGGGTGGCCTCGATACTCGCGCCTCCAACATCCGCAAGGAACTCGAGGAAGCTGCC
AGCCTGCGCGAGCAGGCCGCAGAGGCCTTGGCCCTGGCTGAGCGCCGCGCTCAGGATGCCGACAAGGAAGCCGAAGCGAT
CATCGATCAGGCCAAGCGCGACGCCAAGGCGATGCTCGAGGAGGCCCGCCGTGACCTCGCCGAGAAGATCTCCCGCCGCG
AAGCCCAGGCCGCTGCCCGCATCACACGCGCCGAGACCGAAGCGACCAGCGAAGTCCGCCGCGCAGCTGCTGACGCAGCC
ACCGCTGCCGCCCGCCGCATCCTCTCCGAGCAGACCTCGGTGGATCAGTTCGAGGCAGCTGCCCGCGACATTGAGCGTGC
GCTGAGCTGA

Upstream 100 bases:

>100_bases
TTGCTGTGGATACCGCCGATGCCATGATCGCCCGTTTCGGCGTCAAGGCTTCCCCGGCAGACCTCAAGAAGGCCGTCTCG
GCGGCCCTGGAACAGGCATG

Downstream 100 bases:

>100_bases
TCAACCTCTCCTTGCGAGAGCAAAAAAGCCGCCCTTCCGGGCGGCTTTTTTTTCTGTCCTGAAGTGTCCCATTTTGTCCT
GGTTTGTCCAAGTTTGTCCC

Product: ATP synthase F0 subunit B family protein

Products: ADP; phosphate; H+

Alternate protein names: ATP synthase F(0) sector subunit b; ATPase subunit I; F-type ATPase subunit b; F-ATPase subunit b

Number of amino acids: Translated: 189; Mature: 189

Protein sequence:

>189_residues
MKKTTSLLIAALAVAPLAHAAEGGFVGGLMYAATDPVTFVAFLCMVTFLLIAARMGAFKTILGGLDTRASNIRKELEEAA
SLREQAAEALALAERRAQDADKEAEAIIDQAKRDAKAMLEEARRDLAEKISRREAQAAARITRAETEATSEVRRAAADAA
TAAARRILSEQTSVDQFEAAARDIERALS

Sequences:

>Translated_189_residues
MKKTTSLLIAALAVAPLAHAAEGGFVGGLMYAATDPVTFVAFLCMVTFLLIAARMGAFKTILGGLDTRASNIRKELEEAA
SLREQAAEALALAERRAQDADKEAEAIIDQAKRDAKAMLEEARRDLAEKISRREAQAAARITRAETEATSEVRRAAADAA
TAAARRILSEQTSVDQFEAAARDIERALS
>Mature_189_residues
MKKTTSLLIAALAVAPLAHAAEGGFVGGLMYAATDPVTFVAFLCMVTFLLIAARMGAFKTILGGLDTRASNIRKELEEAA
SLREQAAEALALAERRAQDADKEAEAIIDQAKRDAKAMLEEARRDLAEKISRREAQAAARITRAETEATSEVRRAAADAA
TAAARRILSEQTSVDQFEAAARDIERALS

Specific function: Component of the F(0) channel, it forms part of the peripheral stalk, linking F(1) to F(0)

COG id: COG0711

COG function: function code C; F0F1-type ATP synthase, subunit b

Gene ontology:

Cell location: Cell inner membrane; Single-pass membrane protein

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the ATPase B chain family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): ATPF_HYPNA (Q0C0X0)

Other databases:

- EMBL:   CP000158
- RefSeq:   YP_760623.1
- STRING:   Q0C0X0
- GeneID:   4289531
- GenomeReviews:   CP000158_GR
- KEGG:   hne:HNE_1922
- NMPDR:   fig|228405.5.peg.1850
- TIGR:   HNE_1922
- OMA:   DANRERE
- BioCyc:   HNEP81032:HNE_1922-MONOMER
- HAMAP:   MF_01398
- InterPro:   IPR002146

Pfam domain/function: PF00430 ATP-synt_B

EC number: 3.6.3.14

Molecular weight: Translated: 20218; Mature: 20218

Theoretical pI: Translated: 5.46; Mature: 5.46

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0x14162168)-;

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKTTSLLIAALAVAPLAHAAEGGFVGGLMYAATDPVTFVAFLCMVTFLLIAARMGAFKT
CCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH
ILGGLDTRASNIRKELEEAASLREQAAEALALAERRAQDADKEAEAIIDQAKRDAKAMLE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH
EARRDLAEKISRREAQAAARITRAETEATSEVRRAAADAATAAARRILSEQTSVDQFEAA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ARDIERALS
HHHHHHHHH
>Mature Secondary Structure
MKKTTSLLIAALAVAPLAHAAEGGFVGGLMYAATDPVTFVAFLCMVTFLLIAARMGAFKT
CCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHH
ILGGLDTRASNIRKELEEAASLREQAAEALALAERRAQDADKEAEAIIDQAKRDAKAMLE
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH
EARRDLAEKISRREAQAAARITRAETEATSEVRRAAADAATAAARRILSEQTSVDQFEAA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ARDIERALS
HHHHHHHHH

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: ATP; H2O; H+

Specific reaction: ATP + H2O + H+(in) = ADP + phosphate + H+(out)

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA