| Definition | Hyphomonas neptunium ATCC 15444 chromosome, complete genome. |
|---|---|
| Accession | NC_008358 |
| Length | 3,705,021 |
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The map label for this gene is 114798035
Identifier: 114798035
GI number: 114798035
Start: 3070461
End: 3072431
Strand: Reverse
Name: 114798035
Synonym: HNE_2913
Alternate gene names: NA
Gene position: 3072431-3070461 (Counterclockwise)
Preceding gene: 114800406
Following gene: 114799938
Centisome position: 82.93
GC content: 61.44
Gene sequence:
>1971_bases ATGGTATTGGAGTTCGCTATGATCCGCGCCTGCCTGGCCGCGCTGGCCTTTGCTTTTGCCCTGTCACAGCCCGCGCAAGC CTGGGTCAGCGGCTGGTCCTCGTTCGGCGAACCGAACTGCACCGGCAAGTTCTCCGACAAGGAATGTTTGACGAAGCCGG CAAGATGGGTCCGTTCCGGCGACGGCGCGGTTCATCTGCGCATCAAGGAGTTCCGGGGGCTGCCGAAGAGCAAGGTTGAG GCGATCTTCAAGTCCCAGGGCGTTGACTGGTCGGTGTTCGAAAGGGACACCTACTGGCGGGACGGCAATGACAAGGAAAA CAAGGACAAGGCGCGCCTTGCCCGTTACACCTTGCGCGGCCTCTACACGGCAGACGGCAAGACCGAGCTGATGCCGCCAC AATTCCTTGCCATCTATCCGTTCTCGGACAAGGTTGCGCTTGTGAAGATTGTGGATGGCAATTTCCGCATCGCCACCATC GGCAAGAACCCGGTTCTCTCCGACATCCCGTTCCGCTGGGCATCCTTCACCACCAACTTTGGCGGGCTGCAGGCCACGCC CATGACCATCCAGTTCGAAGCGCCCGGCAGTGGTGACACCCGCTCCCACCATCTGATGGCACCCGATGGCACCATTCTCA CGACCATCGACAATGTCCTTGTGCCCATCAAACGCGACACAACCCAGCCCGAATTGCGCGACCCCGCCTATTACGGGTTT GACAGCGGCCTGATCGGCTTTCCAATACGTACCGCCGCTGGCACCGAAGCCTCCGTCTTCGTCGATTCCCGCACTGGCGC CATCGACCGGATCGATGATCCGCTGACCTTCCTGCGGGTTAACAATGGCATGACCGAGCAGTATATTTGCGGCCAGAGCC GAGGGAAACCGGAGTGGGGCGGTCCCAAAAGCTATTGGGCGGCCATGGTCAAGGTTGGCATGCTGCCGGAAAGCACGGGC CTCCCGGATCGTAATATCTACATGCCGCTCGATGATCGCGGCCGCCCATTGGCGCAGACCACCGGCAATCTCTTTGTCGG CATGGCCCGCATCAGCGCGGAAGACTCCGAGATTGTGGCGGAGACCAGAGGCTGGCTCTTCGTTTATTCCGAAAAGGGAA AGCTCACTTACTCCGTGGCCGGAGCGGCAACTGATGACGTGGTCTCCAGCGCGCGTTACCAGATGATGCCGGAGAATGTC GCGCAGATGGCGCCGCGCCTGCAGCGCGTCGCCGACGTCTGGTTCGGCCGGCCCGACCAGGACATCCTCGAAACCGTCAT CGGTGAGCCGGTCTACCATACCTATGCCATGGAGATGGCGGTGCGCCTGTTCTCCGATCCGGCAAAGGGCGCAGAGGGCG GCATGACAAACTGGACCCATGTTCCCGTGTGCGAGCCCGTGAGCCTGACCTCAAAGTTCCTTGACCTCACCAGTCTGCTG GCCTCGACAGAAACCGGCGCCAATCCACTCGCCGTAGTCAGCGTTGCCGCTGGGCAGAAGAAGGCCAGGTTTCTGGCCAC TCTGAAATATTGGGCAGAGGCCGACGAGCGCGCCGCCGCGAAGGAGCACGCCTATCTGCAGACCACCATCAATGAGGCCA ATGCCGATATGGCTGCCGGTAAGAATGTCCGGGGTGACCATGGCTTCTTCCATGCGGCGCGCGCCACGGGCGGGCGGATG CTGGACTATTACTGGCGCGACAATCAGCGGCTGCCCCTGATCGAAGACGCCAGCGACATCTGCAGCCGCTTTGGCAGCAA CAGCGCGGAATGCCGGCTTGTCTGGCCCTGGGCGCAGGGTATCTATAATCAGGAGGAAGCAGCCCGTCAGGCCGAAGCCG AACGCTACGCCGCCAAGCAGGCCGCCGACCGGGCCGACTATCAACGGGCGATCTCCAAACCGGCCTACGTTTCGTCTAAG CCGAAAGAGATCCAGTATTGCTGGCGAGAGAGTGGCTTCTGGAACTGCTGA
Upstream 100 bases:
>100_bases GTCTACCGGCTGGAAGAAGAAGCCGCCGCAGCCGAGTAGCCGCCTTGCCCCCCTGAAAGGGGGATGTACGGCCGGGCGTC AGACCCTATGCTGGCCAAGA
Downstream 100 bases:
>100_bases TCAGCCCCGCACGCCGGCGCTGAAGCGGATCATCGCTGCGCCGAGCAGGGCGCCGGCGAGGTTGGCTAGCGCATCGAGCG CCGAGCCCTCCCGCCCGGCG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 656; Mature: 656
Protein sequence:
>656_residues MVLEFAMIRACLAALAFAFALSQPAQAWVSGWSSFGEPNCTGKFSDKECLTKPARWVRSGDGAVHLRIKEFRGLPKSKVE AIFKSQGVDWSVFERDTYWRDGNDKENKDKARLARYTLRGLYTADGKTELMPPQFLAIYPFSDKVALVKIVDGNFRIATI GKNPVLSDIPFRWASFTTNFGGLQATPMTIQFEAPGSGDTRSHHLMAPDGTILTTIDNVLVPIKRDTTQPELRDPAYYGF DSGLIGFPIRTAAGTEASVFVDSRTGAIDRIDDPLTFLRVNNGMTEQYICGQSRGKPEWGGPKSYWAAMVKVGMLPESTG LPDRNIYMPLDDRGRPLAQTTGNLFVGMARISAEDSEIVAETRGWLFVYSEKGKLTYSVAGAATDDVVSSARYQMMPENV AQMAPRLQRVADVWFGRPDQDILETVIGEPVYHTYAMEMAVRLFSDPAKGAEGGMTNWTHVPVCEPVSLTSKFLDLTSLL ASTETGANPLAVVSVAAGQKKARFLATLKYWAEADERAAAKEHAYLQTTINEANADMAAGKNVRGDHGFFHAARATGGRM LDYYWRDNQRLPLIEDASDICSRFGSNSAECRLVWPWAQGIYNQEEAARQAEAERYAAKQAADRADYQRAISKPAYVSSK PKEIQYCWRESGFWNC
Sequences:
>Translated_656_residues MVLEFAMIRACLAALAFAFALSQPAQAWVSGWSSFGEPNCTGKFSDKECLTKPARWVRSGDGAVHLRIKEFRGLPKSKVE AIFKSQGVDWSVFERDTYWRDGNDKENKDKARLARYTLRGLYTADGKTELMPPQFLAIYPFSDKVALVKIVDGNFRIATI GKNPVLSDIPFRWASFTTNFGGLQATPMTIQFEAPGSGDTRSHHLMAPDGTILTTIDNVLVPIKRDTTQPELRDPAYYGF DSGLIGFPIRTAAGTEASVFVDSRTGAIDRIDDPLTFLRVNNGMTEQYICGQSRGKPEWGGPKSYWAAMVKVGMLPESTG LPDRNIYMPLDDRGRPLAQTTGNLFVGMARISAEDSEIVAETRGWLFVYSEKGKLTYSVAGAATDDVVSSARYQMMPENV AQMAPRLQRVADVWFGRPDQDILETVIGEPVYHTYAMEMAVRLFSDPAKGAEGGMTNWTHVPVCEPVSLTSKFLDLTSLL ASTETGANPLAVVSVAAGQKKARFLATLKYWAEADERAAAKEHAYLQTTINEANADMAAGKNVRGDHGFFHAARATGGRM LDYYWRDNQRLPLIEDASDICSRFGSNSAECRLVWPWAQGIYNQEEAARQAEAERYAAKQAADRADYQRAISKPAYVSSK PKEIQYCWRESGFWNC >Mature_656_residues MVLEFAMIRACLAALAFAFALSQPAQAWVSGWSSFGEPNCTGKFSDKECLTKPARWVRSGDGAVHLRIKEFRGLPKSKVE AIFKSQGVDWSVFERDTYWRDGNDKENKDKARLARYTLRGLYTADGKTELMPPQFLAIYPFSDKVALVKIVDGNFRIATI GKNPVLSDIPFRWASFTTNFGGLQATPMTIQFEAPGSGDTRSHHLMAPDGTILTTIDNVLVPIKRDTTQPELRDPAYYGF DSGLIGFPIRTAAGTEASVFVDSRTGAIDRIDDPLTFLRVNNGMTEQYICGQSRGKPEWGGPKSYWAAMVKVGMLPESTG LPDRNIYMPLDDRGRPLAQTTGNLFVGMARISAEDSEIVAETRGWLFVYSEKGKLTYSVAGAATDDVVSSARYQMMPENV AQMAPRLQRVADVWFGRPDQDILETVIGEPVYHTYAMEMAVRLFSDPAKGAEGGMTNWTHVPVCEPVSLTSKFLDLTSLL ASTETGANPLAVVSVAAGQKKARFLATLKYWAEADERAAAKEHAYLQTTINEANADMAAGKNVRGDHGFFHAARATGGRM LDYYWRDNQRLPLIEDASDICSRFGSNSAECRLVWPWAQGIYNQEEAARQAEAERYAAKQAADRADYQRAISKPAYVSSK PKEIQYCWRESGFWNC
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 72727; Mature: 72727
Theoretical pI: Translated: 6.72; Mature: 6.72
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVLEFAMIRACLAALAFAFALSQPAQAWVSGWSSFGEPNCTGKFSDKECLTKPARWVRSG CCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCC DGAVHLRIKEFRGLPKSKVEAIFKSQGVDWSVFERDTYWRDGNDKENKDKARLARYTLRG CCEEEEEEHHHCCCCHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHE LYTADGKTELMPPQFLAIYPFSDKVALVKIVDGNFRIATIGKNPVLSDIPFRWASFTTNF EEECCCCCCCCCCCEEEEEECCCCEEEEEEECCCEEEEEECCCCCCCCCCCCHHHCCCCC GGLQATPMTIQFEAPGSGDTRSHHLMAPDGTILTTIDNVLVPIKRDTTQPELRDPAYYGF CCEEECCEEEEEECCCCCCCCCCEEECCCCCEEEECCCEEEEEECCCCCCCCCCCCCCCC DSGLIGFPIRTAAGTEASVFVDSRTGAIDRIDDPLTFLRVNNGMTEQYICGQSRGKPEWG CCCCCCCEEECCCCCCEEEEEECCCCCCCCCCCCEEEEEECCCCCHHHCCCCCCCCCCCC GPKSYWAAMVKVGMLPESTGLPDRNIYMPLDDRGRPLAQTTGNLFVGMARISAEDSEIVA CHHHHHHHHHHHCCCCCCCCCCCCEEEECCCCCCCCHHHCCCCEEEEEEEECCCCHHHHE ETRGWLFVYSEKGKLTYSVAGAATDDVVSSARYQMMPENVAQMAPRLQRVADVWFGRPDQ ECCCEEEEEECCCCEEEEECCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCH DILETVIGEPVYHTYAMEMAVRLFSDPAKGAEGGMTNWTHVPVCEPVSLTSKFLDLTSLL HHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH ASTETGANPLAVVSVAAGQKKARFLATLKYWAEADERAAAKEHAYLQTTINEANADMAAG HHCCCCCCCEEEEEECCCCHHHHHHHHHHHHHCCHHHHHHHHHHHEEEEHHHCCCHHHCC KNVRGDHGFFHAARATGGRMLDYYWRDNQRLPLIEDASDICSRFGSNSAECRLVWPWAQG CCCCCCCCEEEEHHCCCCCEEEEEECCCCCCCCCCCHHHHHHHHCCCCCCEEEECHHHHC IYNQEEAARQAEAERYAAKQAADRADYQRAISKPAYVSSKPKEIQYCWRESGFWNC CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCCCCC >Mature Secondary Structure MVLEFAMIRACLAALAFAFALSQPAQAWVSGWSSFGEPNCTGKFSDKECLTKPARWVRSG CCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCC DGAVHLRIKEFRGLPKSKVEAIFKSQGVDWSVFERDTYWRDGNDKENKDKARLARYTLRG CCEEEEEEHHHCCCCHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHE LYTADGKTELMPPQFLAIYPFSDKVALVKIVDGNFRIATIGKNPVLSDIPFRWASFTTNF EEECCCCCCCCCCCEEEEEECCCCEEEEEEECCCEEEEEECCCCCCCCCCCCHHHCCCCC GGLQATPMTIQFEAPGSGDTRSHHLMAPDGTILTTIDNVLVPIKRDTTQPELRDPAYYGF CCEEECCEEEEEECCCCCCCCCCEEECCCCCEEEECCCEEEEEECCCCCCCCCCCCCCCC DSGLIGFPIRTAAGTEASVFVDSRTGAIDRIDDPLTFLRVNNGMTEQYICGQSRGKPEWG CCCCCCCEEECCCCCCEEEEEECCCCCCCCCCCCEEEEEECCCCCHHHCCCCCCCCCCCC GPKSYWAAMVKVGMLPESTGLPDRNIYMPLDDRGRPLAQTTGNLFVGMARISAEDSEIVA CHHHHHHHHHHHCCCCCCCCCCCCEEEECCCCCCCCHHHCCCCEEEEEEEECCCCHHHHE ETRGWLFVYSEKGKLTYSVAGAATDDVVSSARYQMMPENVAQMAPRLQRVADVWFGRPDQ ECCCEEEEEECCCCEEEEECCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCH DILETVIGEPVYHTYAMEMAVRLFSDPAKGAEGGMTNWTHVPVCEPVSLTSKFLDLTSLL HHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH ASTETGANPLAVVSVAAGQKKARFLATLKYWAEADERAAAKEHAYLQTTINEANADMAAG HHCCCCCCCEEEEEECCCCHHHHHHHHHHHHHCCHHHHHHHHHHHEEEEHHHCCCHHHCC KNVRGDHGFFHAARATGGRMLDYYWRDNQRLPLIEDASDICSRFGSNSAECRLVWPWAQG CCCCCCCCEEEEHHCCCCCEEEEEECCCCCCCCCCCHHHHHHHHCCCCCCEEEECHHHHC IYNQEEAARQAEAERYAAKQAADRADYQRAISKPAYVSSKPKEIQYCWRESGFWNC CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA