Definition Hyphomonas neptunium ATCC 15444 chromosome, complete genome.
Accession NC_008358
Length 3,705,021

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The map label for this gene is 114798035

Identifier: 114798035

GI number: 114798035

Start: 3070461

End: 3072431

Strand: Reverse

Name: 114798035

Synonym: HNE_2913

Alternate gene names: NA

Gene position: 3072431-3070461 (Counterclockwise)

Preceding gene: 114800406

Following gene: 114799938

Centisome position: 82.93

GC content: 61.44

Gene sequence:

>1971_bases
ATGGTATTGGAGTTCGCTATGATCCGCGCCTGCCTGGCCGCGCTGGCCTTTGCTTTTGCCCTGTCACAGCCCGCGCAAGC
CTGGGTCAGCGGCTGGTCCTCGTTCGGCGAACCGAACTGCACCGGCAAGTTCTCCGACAAGGAATGTTTGACGAAGCCGG
CAAGATGGGTCCGTTCCGGCGACGGCGCGGTTCATCTGCGCATCAAGGAGTTCCGGGGGCTGCCGAAGAGCAAGGTTGAG
GCGATCTTCAAGTCCCAGGGCGTTGACTGGTCGGTGTTCGAAAGGGACACCTACTGGCGGGACGGCAATGACAAGGAAAA
CAAGGACAAGGCGCGCCTTGCCCGTTACACCTTGCGCGGCCTCTACACGGCAGACGGCAAGACCGAGCTGATGCCGCCAC
AATTCCTTGCCATCTATCCGTTCTCGGACAAGGTTGCGCTTGTGAAGATTGTGGATGGCAATTTCCGCATCGCCACCATC
GGCAAGAACCCGGTTCTCTCCGACATCCCGTTCCGCTGGGCATCCTTCACCACCAACTTTGGCGGGCTGCAGGCCACGCC
CATGACCATCCAGTTCGAAGCGCCCGGCAGTGGTGACACCCGCTCCCACCATCTGATGGCACCCGATGGCACCATTCTCA
CGACCATCGACAATGTCCTTGTGCCCATCAAACGCGACACAACCCAGCCCGAATTGCGCGACCCCGCCTATTACGGGTTT
GACAGCGGCCTGATCGGCTTTCCAATACGTACCGCCGCTGGCACCGAAGCCTCCGTCTTCGTCGATTCCCGCACTGGCGC
CATCGACCGGATCGATGATCCGCTGACCTTCCTGCGGGTTAACAATGGCATGACCGAGCAGTATATTTGCGGCCAGAGCC
GAGGGAAACCGGAGTGGGGCGGTCCCAAAAGCTATTGGGCGGCCATGGTCAAGGTTGGCATGCTGCCGGAAAGCACGGGC
CTCCCGGATCGTAATATCTACATGCCGCTCGATGATCGCGGCCGCCCATTGGCGCAGACCACCGGCAATCTCTTTGTCGG
CATGGCCCGCATCAGCGCGGAAGACTCCGAGATTGTGGCGGAGACCAGAGGCTGGCTCTTCGTTTATTCCGAAAAGGGAA
AGCTCACTTACTCCGTGGCCGGAGCGGCAACTGATGACGTGGTCTCCAGCGCGCGTTACCAGATGATGCCGGAGAATGTC
GCGCAGATGGCGCCGCGCCTGCAGCGCGTCGCCGACGTCTGGTTCGGCCGGCCCGACCAGGACATCCTCGAAACCGTCAT
CGGTGAGCCGGTCTACCATACCTATGCCATGGAGATGGCGGTGCGCCTGTTCTCCGATCCGGCAAAGGGCGCAGAGGGCG
GCATGACAAACTGGACCCATGTTCCCGTGTGCGAGCCCGTGAGCCTGACCTCAAAGTTCCTTGACCTCACCAGTCTGCTG
GCCTCGACAGAAACCGGCGCCAATCCACTCGCCGTAGTCAGCGTTGCCGCTGGGCAGAAGAAGGCCAGGTTTCTGGCCAC
TCTGAAATATTGGGCAGAGGCCGACGAGCGCGCCGCCGCGAAGGAGCACGCCTATCTGCAGACCACCATCAATGAGGCCA
ATGCCGATATGGCTGCCGGTAAGAATGTCCGGGGTGACCATGGCTTCTTCCATGCGGCGCGCGCCACGGGCGGGCGGATG
CTGGACTATTACTGGCGCGACAATCAGCGGCTGCCCCTGATCGAAGACGCCAGCGACATCTGCAGCCGCTTTGGCAGCAA
CAGCGCGGAATGCCGGCTTGTCTGGCCCTGGGCGCAGGGTATCTATAATCAGGAGGAAGCAGCCCGTCAGGCCGAAGCCG
AACGCTACGCCGCCAAGCAGGCCGCCGACCGGGCCGACTATCAACGGGCGATCTCCAAACCGGCCTACGTTTCGTCTAAG
CCGAAAGAGATCCAGTATTGCTGGCGAGAGAGTGGCTTCTGGAACTGCTGA

Upstream 100 bases:

>100_bases
GTCTACCGGCTGGAAGAAGAAGCCGCCGCAGCCGAGTAGCCGCCTTGCCCCCCTGAAAGGGGGATGTACGGCCGGGCGTC
AGACCCTATGCTGGCCAAGA

Downstream 100 bases:

>100_bases
TCAGCCCCGCACGCCGGCGCTGAAGCGGATCATCGCTGCGCCGAGCAGGGCGCCGGCGAGGTTGGCTAGCGCATCGAGCG
CCGAGCCCTCCCGCCCGGCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 656; Mature: 656

Protein sequence:

>656_residues
MVLEFAMIRACLAALAFAFALSQPAQAWVSGWSSFGEPNCTGKFSDKECLTKPARWVRSGDGAVHLRIKEFRGLPKSKVE
AIFKSQGVDWSVFERDTYWRDGNDKENKDKARLARYTLRGLYTADGKTELMPPQFLAIYPFSDKVALVKIVDGNFRIATI
GKNPVLSDIPFRWASFTTNFGGLQATPMTIQFEAPGSGDTRSHHLMAPDGTILTTIDNVLVPIKRDTTQPELRDPAYYGF
DSGLIGFPIRTAAGTEASVFVDSRTGAIDRIDDPLTFLRVNNGMTEQYICGQSRGKPEWGGPKSYWAAMVKVGMLPESTG
LPDRNIYMPLDDRGRPLAQTTGNLFVGMARISAEDSEIVAETRGWLFVYSEKGKLTYSVAGAATDDVVSSARYQMMPENV
AQMAPRLQRVADVWFGRPDQDILETVIGEPVYHTYAMEMAVRLFSDPAKGAEGGMTNWTHVPVCEPVSLTSKFLDLTSLL
ASTETGANPLAVVSVAAGQKKARFLATLKYWAEADERAAAKEHAYLQTTINEANADMAAGKNVRGDHGFFHAARATGGRM
LDYYWRDNQRLPLIEDASDICSRFGSNSAECRLVWPWAQGIYNQEEAARQAEAERYAAKQAADRADYQRAISKPAYVSSK
PKEIQYCWRESGFWNC

Sequences:

>Translated_656_residues
MVLEFAMIRACLAALAFAFALSQPAQAWVSGWSSFGEPNCTGKFSDKECLTKPARWVRSGDGAVHLRIKEFRGLPKSKVE
AIFKSQGVDWSVFERDTYWRDGNDKENKDKARLARYTLRGLYTADGKTELMPPQFLAIYPFSDKVALVKIVDGNFRIATI
GKNPVLSDIPFRWASFTTNFGGLQATPMTIQFEAPGSGDTRSHHLMAPDGTILTTIDNVLVPIKRDTTQPELRDPAYYGF
DSGLIGFPIRTAAGTEASVFVDSRTGAIDRIDDPLTFLRVNNGMTEQYICGQSRGKPEWGGPKSYWAAMVKVGMLPESTG
LPDRNIYMPLDDRGRPLAQTTGNLFVGMARISAEDSEIVAETRGWLFVYSEKGKLTYSVAGAATDDVVSSARYQMMPENV
AQMAPRLQRVADVWFGRPDQDILETVIGEPVYHTYAMEMAVRLFSDPAKGAEGGMTNWTHVPVCEPVSLTSKFLDLTSLL
ASTETGANPLAVVSVAAGQKKARFLATLKYWAEADERAAAKEHAYLQTTINEANADMAAGKNVRGDHGFFHAARATGGRM
LDYYWRDNQRLPLIEDASDICSRFGSNSAECRLVWPWAQGIYNQEEAARQAEAERYAAKQAADRADYQRAISKPAYVSSK
PKEIQYCWRESGFWNC
>Mature_656_residues
MVLEFAMIRACLAALAFAFALSQPAQAWVSGWSSFGEPNCTGKFSDKECLTKPARWVRSGDGAVHLRIKEFRGLPKSKVE
AIFKSQGVDWSVFERDTYWRDGNDKENKDKARLARYTLRGLYTADGKTELMPPQFLAIYPFSDKVALVKIVDGNFRIATI
GKNPVLSDIPFRWASFTTNFGGLQATPMTIQFEAPGSGDTRSHHLMAPDGTILTTIDNVLVPIKRDTTQPELRDPAYYGF
DSGLIGFPIRTAAGTEASVFVDSRTGAIDRIDDPLTFLRVNNGMTEQYICGQSRGKPEWGGPKSYWAAMVKVGMLPESTG
LPDRNIYMPLDDRGRPLAQTTGNLFVGMARISAEDSEIVAETRGWLFVYSEKGKLTYSVAGAATDDVVSSARYQMMPENV
AQMAPRLQRVADVWFGRPDQDILETVIGEPVYHTYAMEMAVRLFSDPAKGAEGGMTNWTHVPVCEPVSLTSKFLDLTSLL
ASTETGANPLAVVSVAAGQKKARFLATLKYWAEADERAAAKEHAYLQTTINEANADMAAGKNVRGDHGFFHAARATGGRM
LDYYWRDNQRLPLIEDASDICSRFGSNSAECRLVWPWAQGIYNQEEAARQAEAERYAAKQAADRADYQRAISKPAYVSSK
PKEIQYCWRESGFWNC

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 72727; Mature: 72727

Theoretical pI: Translated: 6.72; Mature: 6.72

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVLEFAMIRACLAALAFAFALSQPAQAWVSGWSSFGEPNCTGKFSDKECLTKPARWVRSG
CCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCC
DGAVHLRIKEFRGLPKSKVEAIFKSQGVDWSVFERDTYWRDGNDKENKDKARLARYTLRG
CCEEEEEEHHHCCCCHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHE
LYTADGKTELMPPQFLAIYPFSDKVALVKIVDGNFRIATIGKNPVLSDIPFRWASFTTNF
EEECCCCCCCCCCCEEEEEECCCCEEEEEEECCCEEEEEECCCCCCCCCCCCHHHCCCCC
GGLQATPMTIQFEAPGSGDTRSHHLMAPDGTILTTIDNVLVPIKRDTTQPELRDPAYYGF
CCEEECCEEEEEECCCCCCCCCCEEECCCCCEEEECCCEEEEEECCCCCCCCCCCCCCCC
DSGLIGFPIRTAAGTEASVFVDSRTGAIDRIDDPLTFLRVNNGMTEQYICGQSRGKPEWG
CCCCCCCEEECCCCCCEEEEEECCCCCCCCCCCCEEEEEECCCCCHHHCCCCCCCCCCCC
GPKSYWAAMVKVGMLPESTGLPDRNIYMPLDDRGRPLAQTTGNLFVGMARISAEDSEIVA
CHHHHHHHHHHHCCCCCCCCCCCCEEEECCCCCCCCHHHCCCCEEEEEEEECCCCHHHHE
ETRGWLFVYSEKGKLTYSVAGAATDDVVSSARYQMMPENVAQMAPRLQRVADVWFGRPDQ
ECCCEEEEEECCCCEEEEECCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCH
DILETVIGEPVYHTYAMEMAVRLFSDPAKGAEGGMTNWTHVPVCEPVSLTSKFLDLTSLL
HHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH
ASTETGANPLAVVSVAAGQKKARFLATLKYWAEADERAAAKEHAYLQTTINEANADMAAG
HHCCCCCCCEEEEEECCCCHHHHHHHHHHHHHCCHHHHHHHHHHHEEEEHHHCCCHHHCC
KNVRGDHGFFHAARATGGRMLDYYWRDNQRLPLIEDASDICSRFGSNSAECRLVWPWAQG
CCCCCCCCEEEEHHCCCCCEEEEEECCCCCCCCCCCHHHHHHHHCCCCCCEEEECHHHHC
IYNQEEAARQAEAERYAAKQAADRADYQRAISKPAYVSSKPKEIQYCWRESGFWNC
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCCCCC
>Mature Secondary Structure
MVLEFAMIRACLAALAFAFALSQPAQAWVSGWSSFGEPNCTGKFSDKECLTKPARWVRSG
CCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCC
DGAVHLRIKEFRGLPKSKVEAIFKSQGVDWSVFERDTYWRDGNDKENKDKARLARYTLRG
CCEEEEEEHHHCCCCHHHHHHHHHHCCCCEEEEECCCCCCCCCCCCCHHHHHHHHHHHHE
LYTADGKTELMPPQFLAIYPFSDKVALVKIVDGNFRIATIGKNPVLSDIPFRWASFTTNF
EEECCCCCCCCCCCEEEEEECCCCEEEEEEECCCEEEEEECCCCCCCCCCCCHHHCCCCC
GGLQATPMTIQFEAPGSGDTRSHHLMAPDGTILTTIDNVLVPIKRDTTQPELRDPAYYGF
CCEEECCEEEEEECCCCCCCCCCEEECCCCCEEEECCCEEEEEECCCCCCCCCCCCCCCC
DSGLIGFPIRTAAGTEASVFVDSRTGAIDRIDDPLTFLRVNNGMTEQYICGQSRGKPEWG
CCCCCCCEEECCCCCCEEEEEECCCCCCCCCCCCEEEEEECCCCCHHHCCCCCCCCCCCC
GPKSYWAAMVKVGMLPESTGLPDRNIYMPLDDRGRPLAQTTGNLFVGMARISAEDSEIVA
CHHHHHHHHHHHCCCCCCCCCCCCEEEECCCCCCCCHHHCCCCEEEEEEEECCCCHHHHE
ETRGWLFVYSEKGKLTYSVAGAATDDVVSSARYQMMPENVAQMAPRLQRVADVWFGRPDQ
ECCCEEEEEECCCCEEEEECCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHCCCCCH
DILETVIGEPVYHTYAMEMAVRLFSDPAKGAEGGMTNWTHVPVCEPVSLTSKFLDLTSLL
HHHHHHHCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHH
ASTETGANPLAVVSVAAGQKKARFLATLKYWAEADERAAAKEHAYLQTTINEANADMAAG
HHCCCCCCCEEEEEECCCCHHHHHHHHHHHHHCCHHHHHHHHHHHEEEEHHHCCCHHHCC
KNVRGDHGFFHAARATGGRMLDYYWRDNQRLPLIEDASDICSRFGSNSAECRLVWPWAQG
CCCCCCCCEEEEHHCCCCCEEEEEECCCCCCCCCCCHHHHHHHHCCCCCCEEEECHHHHC
IYNQEEAARQAEAERYAAKQAADRADYQRAISKPAYVSSKPKEIQYCWRESGFWNC
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA