| Definition | Hyphomonas neptunium ATCC 15444 chromosome, complete genome. |
|---|---|
| Accession | NC_008358 |
| Length | 3,705,021 |
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The map label for this gene is 114798015
Identifier: 114798015
GI number: 114798015
Start: 691318
End: 691839
Strand: Direct
Name: 114798015
Synonym: HNE_0684
Alternate gene names: NA
Gene position: 691318-691839 (Clockwise)
Preceding gene: 114799009
Following gene: 114797868
Centisome position: 18.66
GC content: 63.41
Gene sequence:
>522_bases ATGAAATCTCTTTCCGTCCTGTCTGCGCTCTTGCTCCCCGCCATTCTTGGCGCGTGCAATCCCGCTCCAAACGCCCCTGA GCCCATCGTCCCACCCCCGCATGTGCCCGAGGTGTCCGGTTCTGCCACCGCAGACGACGTGCCCGCCCCGCCCGCTGCCG ACAGCACGCTCAGCCTCACCACGTTTGAGCCCACAACCGTGGAAATCTATTGCAGCTTCCACCGGCCCAGCCAGGACGGC GTTCTGGGTGAGCGCCTCTTCATCACCGAAATTGCCGGCGTACCGGCCCCCGCCGCCATCGGCCTTGAAGGCGAGCCTGT CACGCTCAAGGAAGTCTCCAAGACCGAAGCGGACGGCGCGGAGATCTGGACCTATCGCAATGACGAGCGCCCCGTTGAAA TCGAGCTGCGTCTGAAGGAGGTCGAGCAAGGCATGGAATACCGCAATTATACCGGCACCATCCGCATCTCCGACCCCGTA GACGCCAGCGCGATCAACATCGAAGGCAGCTGCGGGGTCTGA
Upstream 100 bases:
>100_bases GGGCCGAGCAGCAGGCCTGAACGTCGCAGTCAGCCTATTCACAGCTTACCTGTGAACGTATCGGCCTCCGGCGCGTTGGT GCGGGCCATAGGAGGCTGCA
Downstream 100 bases:
>100_bases CCCCCGCTGCGCAATCCATAGACCCGCCCGCTTGACCCCGGCGCCCGTAGCTGTAAGCCGTGCCCACCCCTAATTCCGGC GACTGACAGGGCCTATGGCT
Product: putative lipoprotein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 173; Mature: 173
Protein sequence:
>173_residues MKSLSVLSALLLPAILGACNPAPNAPEPIVPPPHVPEVSGSATADDVPAPPAADSTLSLTTFEPTTVEIYCSFHRPSQDG VLGERLFITEIAGVPAPAAIGLEGEPVTLKEVSKTEADGAEIWTYRNDERPVEIELRLKEVEQGMEYRNYTGTIRISDPV DASAINIEGSCGV
Sequences:
>Translated_173_residues MKSLSVLSALLLPAILGACNPAPNAPEPIVPPPHVPEVSGSATADDVPAPPAADSTLSLTTFEPTTVEIYCSFHRPSQDG VLGERLFITEIAGVPAPAAIGLEGEPVTLKEVSKTEADGAEIWTYRNDERPVEIELRLKEVEQGMEYRNYTGTIRISDPV DASAINIEGSCGV >Mature_173_residues MKSLSVLSALLLPAILGACNPAPNAPEPIVPPPHVPEVSGSATADDVPAPPAADSTLSLTTFEPTTVEIYCSFHRPSQDG VLGERLFITEIAGVPAPAAIGLEGEPVTLKEVSKTEADGAEIWTYRNDERPVEIELRLKEVEQGMEYRNYTGTIRISDPV DASAINIEGSCGV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18307; Mature: 18307
Theoretical pI: Translated: 4.06; Mature: 4.06
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKSLSVLSALLLPAILGACNPAPNAPEPIVPPPHVPEVSGSATADDVPAPPAADSTLSLT CCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEE TFEPTTVEIYCSFHRPSQDGVLGERLFITEIAGVPAPAAIGLEGEPVTLKEVSKTEADGA EECCCEEEEEEEECCCCCCCCCCCEEEEEECCCCCCCEEECCCCCCEEHHHCCCCCCCCC EIWTYRNDERPVEIELRLKEVEQGMEYRNYTGTIRISDPVDASAINIEGSCGV EEEEEECCCCCEEEEEEEHHHHCCCCCCCCEEEEEECCCCCCEEEEECCCCCC >Mature Secondary Structure MKSLSVLSALLLPAILGACNPAPNAPEPIVPPPHVPEVSGSATADDVPAPPAADSTLSLT CCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEE TFEPTTVEIYCSFHRPSQDGVLGERLFITEIAGVPAPAAIGLEGEPVTLKEVSKTEADGA EECCCEEEEEEEECCCCCCCCCCCEEEEEECCCCCCCEEECCCCCCEEHHHCCCCCCCCC EIWTYRNDERPVEIELRLKEVEQGMEYRNYTGTIRISDPVDASAINIEGSCGV EEEEEECCCCCEEEEEEEHHHHCCCCCCCCEEEEEECCCCCCEEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA