| Definition | Hyphomonas neptunium ATCC 15444 chromosome, complete genome. |
|---|---|
| Accession | NC_008358 |
| Length | 3,705,021 |
Click here to switch to the map view.
The map label for this gene is 114798011
Identifier: 114798011
GI number: 114798011
Start: 2566629
End: 2567819
Strand: Direct
Name: 114798011
Synonym: HNE_2450
Alternate gene names: NA
Gene position: 2566629-2567819 (Clockwise)
Preceding gene: 114799529
Following gene: 114800516
Centisome position: 69.27
GC content: 55.0
Gene sequence:
>1191_bases GTGCGCGCGCCAGCATCGTTCAAAAGAACGCTTTCCTTCTATTATCTGTACGTCTTCTGCTACGACTTCATTTTTGGATA CGCGATCTTTCCGGCCTTCTTTCAGTTGAAGGGAAGCTCACCGGAAATGGTGGGCGCCATCCTCGCCTTTTGGGCAGCCT GCATTATTGCCTTCGAGATCCCTTCCGGCCTGCTGGCAGACATATTCGACCGCAAGGCGCTTCTGATTGCAGCGCCCCTT CTCAAGGGCGCCTGCTTTGTTGTGTGGGTTTTGGCCGATGGACAAATCTGGATGTATTTTCTGGGAATGGCGCTCTGGTC GATGGCGTCCGCGCTGCGCTCAGGCACCAAGGAAGCGTTGCTTTTTGAGCATGTAACCGCTCACGGACGGGCGCCAGACT ATACCTCAATTCTCGGGAAGGAACGCGCGTTTCAGGAGGCCGCTACGCTGTCCGGAGCTGCGGCGGGCGGCCTCATCGCG GCGCAGAACCTGGAACTGGCCTTCTGGTTATCCCTTGTTCCATTGAGCCTCTGCGCACTTTCCGCCCTGCCTTTGAGCGA TCTTCGCAAGGAGAGAAGGATTACGCAGGATACCTCTTTCACACGCGCACCTGAGCTTATCAAAACAACCTGGTCTGAAT ACATGTCGAAGCCAGAGATCAGGCGTGTCACACTTTATGTTGCCCTCTGCGTGACCTTTCTGAGCACGCTGGAGGACTTC AACCAGCTGTTCCTGCTAGCAATTGAAATGCCGGTCTGGTCTATCGGGATTGCCATTGCCGGAATGGGGCTGGCGCGGTT GATGCTGGCCTATTATGCGAGCTGGTTTGAGCATTTCCCGGCGTTTATATGGATCGGGCCATTGTTTTGCGGAGGGGCGC TTTTTCTCTCCGGCTTCCTCTCATTTGCCTATTCCCTGCTGGCAATGGCGAGCGCCTATATCCTGACTGCGCCCCTCATG GTTCTGACGATGAGCCGGTTCCAGAAGGCGTTTGATGGCGAAGGCCGGGCGACAGCCACTTCTGTGCTCAGCGTATCAAT GGAAGCGCTGTCTTTGGTGTTCAATATTGCGATCGCCATCTTGTTCAGCCAACTGAATGTTCTCAAAACCTACCAGATTT GTGGAGCTTATCTGGTGGTGTTTGCACTCTGGGAGATGGCCCGCAGACCCTATAGAAACGCGCCGATCTGA
Upstream 100 bases:
>100_bases TGTGGCAGGAGCCAGATCACCTTGATAGCGCCGCGCCGGCAGGACGGTGGCTTCCCTCATGGGCAGGGAATTGCGGGCCG CTTTGCTGGAGGACTGAACC
Downstream 100 bases:
>100_bases GCGAGAACGCCAACAAAAAAACTTCATATAAAAATCGTTGTGCCGGGCATGGGCGTTTCGTAATCACACAGTTGCTCGGC TTACCGGCAACTTCCTCTCG
Product: major facilitator family transporter
Products: NA
Alternate protein names: Facilitator Transporter; Facilitator Family Transporter
Number of amino acids: Translated: 396; Mature: 396
Protein sequence:
>396_residues MRAPASFKRTLSFYYLYVFCYDFIFGYAIFPAFFQLKGSSPEMVGAILAFWAACIIAFEIPSGLLADIFDRKALLIAAPL LKGACFVVWVLADGQIWMYFLGMALWSMASALRSGTKEALLFEHVTAHGRAPDYTSILGKERAFQEAATLSGAAAGGLIA AQNLELAFWLSLVPLSLCALSALPLSDLRKERRITQDTSFTRAPELIKTTWSEYMSKPEIRRVTLYVALCVTFLSTLEDF NQLFLLAIEMPVWSIGIAIAGMGLARLMLAYYASWFEHFPAFIWIGPLFCGGALFLSGFLSFAYSLLAMASAYILTAPLM VLTMSRFQKAFDGEGRATATSVLSVSMEALSLVFNIAIAILFSQLNVLKTYQICGAYLVVFALWEMARRPYRNAPI
Sequences:
>Translated_396_residues MRAPASFKRTLSFYYLYVFCYDFIFGYAIFPAFFQLKGSSPEMVGAILAFWAACIIAFEIPSGLLADIFDRKALLIAAPL LKGACFVVWVLADGQIWMYFLGMALWSMASALRSGTKEALLFEHVTAHGRAPDYTSILGKERAFQEAATLSGAAAGGLIA AQNLELAFWLSLVPLSLCALSALPLSDLRKERRITQDTSFTRAPELIKTTWSEYMSKPEIRRVTLYVALCVTFLSTLEDF NQLFLLAIEMPVWSIGIAIAGMGLARLMLAYYASWFEHFPAFIWIGPLFCGGALFLSGFLSFAYSLLAMASAYILTAPLM VLTMSRFQKAFDGEGRATATSVLSVSMEALSLVFNIAIAILFSQLNVLKTYQICGAYLVVFALWEMARRPYRNAPI >Mature_396_residues MRAPASFKRTLSFYYLYVFCYDFIFGYAIFPAFFQLKGSSPEMVGAILAFWAACIIAFEIPSGLLADIFDRKALLIAAPL LKGACFVVWVLADGQIWMYFLGMALWSMASALRSGTKEALLFEHVTAHGRAPDYTSILGKERAFQEAATLSGAAAGGLIA AQNLELAFWLSLVPLSLCALSALPLSDLRKERRITQDTSFTRAPELIKTTWSEYMSKPEIRRVTLYVALCVTFLSTLEDF NQLFLLAIEMPVWSIGIAIAGMGLARLMLAYYASWFEHFPAFIWIGPLFCGGALFLSGFLSFAYSLLAMASAYILTAPLM VLTMSRFQKAFDGEGRATATSVLSVSMEALSLVFNIAIAILFSQLNVLKTYQICGAYLVVFALWEMARRPYRNAPI
Specific function: Unknown
COG id: COG0477
COG function: function code GEPR; Permeases of the major facilitator superfamily
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 43873; Mature: 43873
Theoretical pI: Translated: 8.24; Mature: 8.24
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 5.3 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 5.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRAPASFKRTLSFYYLYVFCYDFIFGYAIFPAFFQLKGSSPEMVGAILAFWAACIIAFEI CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHC PSGLLADIFDRKALLIAAPLLKGACFVVWVLADGQIWMYFLGMALWSMASALRSGTKEAL CCHHHHHHHCCHHHHHHHHHHCCCEEEEEEEECCHHHHHHHHHHHHHHHHHHHCCCHHHH LFEHVTAHGRAPDYTSILGKERAFQEAATLSGAAAGGLIAAQNLELAFWLSLVPLSLCAL HHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCHHCCCCCEECCCHHHHHHHHHHHHHHHH SALPLSDLRKERRITQDTSFTRAPELIKTTWSEYMSKPEIRRVTLYVALCVTFLSTLEDF HCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHH NQLFLLAIEMPVWSIGIAIAGMGLARLMLAYYASWFEHFPAFIWIGPLFCGGALFLSGFL HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHH SFAYSLLAMASAYILTAPLMVLTMSRFQKAFDGEGRATATSVLSVSMEALSLVFNIAIAI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHH LFSQLNVLKTYQICGAYLVVFALWEMARRPYRNAPI HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure MRAPASFKRTLSFYYLYVFCYDFIFGYAIFPAFFQLKGSSPEMVGAILAFWAACIIAFEI CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHC PSGLLADIFDRKALLIAAPLLKGACFVVWVLADGQIWMYFLGMALWSMASALRSGTKEAL CCHHHHHHHCCHHHHHHHHHHCCCEEEEEEEECCHHHHHHHHHHHHHHHHHHHCCCHHHH LFEHVTAHGRAPDYTSILGKERAFQEAATLSGAAAGGLIAAQNLELAFWLSLVPLSLCAL HHHHHHHCCCCCCHHHHHHHHHHHHHHHHHCCHHCCCCCEECCCHHHHHHHHHHHHHHHH SALPLSDLRKERRITQDTSFTRAPELIKTTWSEYMSKPEIRRVTLYVALCVTFLSTLEDF HCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHH NQLFLLAIEMPVWSIGIAIAGMGLARLMLAYYASWFEHFPAFIWIGPLFCGGALFLSGFL HHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHH SFAYSLLAMASAYILTAPLMVLTMSRFQKAFDGEGRATATSVLSVSMEALSLVFNIAIAI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHH LFSQLNVLKTYQICGAYLVVFALWEMARRPYRNAPI HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA