Click here to switch to the map view.

The map label for this gene is 114797930

Identifier: 114797930

GI number: 114797930

Start: 2755745

End: 2757361

Strand: Reverse

Name: 114797930

Synonym: HNE_2596

Alternate gene names: NA

Gene position: 2757361-2755745 (Counterclockwise)

Preceding gene: 114799487

Following gene: 114797182

Centisome position: 74.42

GC content: 63.7

Gene sequence:

>1617_bases
ATGGCAAACGCGAGGTATCGGGTAGGGAGCGTGGCCGCATGTGGCGTCCGTTCCTTGCGCGTGGCGGGCTCGGTCTTCTG
CACGCTGATGGCTGCGGCTGCCTGCCAGGCAGCGCCGGGGGAGACCGCACCTGCGGCGCCTGCCGGGCCGGAAGCCTCCT
ACGAAATAACCCTCCGGCCCGAGCTGGGCGAGGACGGGATGGTGGAAGCCATCGCCGTCACGTCTCGCCTGCATGGTGAC
CTGAAGGACGGGGAAACCCGCCTGAAGCTGTCTGCGCCGGTTGTGTATGTGAATGTCATGGGCATTGCGGATCGAATTCT
TGATCTGCGTGTGACGGACGAGGCCGGCCCGGTTGCGTTCACCCTTGAGCAGGACGACCCAGTGCCCGGCGGTTTCCCGT
ACTTCCGGCACTGGACGGCGACCCGTGATGTCGAATTCCCTCTCGACATCAGCTACCGGGCGCTGGTCCAGCCTGAGGGG
GGACCTTCCGGGCCGGCCTTTGGCATCCGGCCGTCAAAAGGCGGGGTCAGTGGCTCGGGCGCGGGCTATATGATCGTGCC
GGTGAATGCCGAGGCCAGCCAGTCGGTTCTTGAGTGGGACCTGACGGAGTTCGGGCCGGGTGCGGTAGGGGTCACCACAT
TCGGTGAGGGGCGCGTGACCGTTAACGGGCCGCCTGCCGCCCTGATGCAGGGCTGGCTGATGGCGGGGCAGGCCGGGCAA
TATCCACCTGCGGAGGAGGAGAGCCATTTCCGCGCCTATTGGCTGGGCGATTTTCCCTTCGATGTGGCCGCCGAGATGGC
CTACGCCAAAGATTTATATGACTTTTTTGGCGAGTTCTTTGCTTATCTCGATCCGGCGCCGGATTACCGTGTGTTCCTTC
GCCAGCTGGATACCGAGCCTTATGGCGGGGCCACCGCGCTGGCCAATTCTTTCATGCTGTCGCGCGGGCCTGCCTTGCCC
GAAGAAATGGGCGGGCACTCGCCGCGCTCGACGCTTGCCCATGAAATGATCCATATGTGGGTGGGCGGATTGAGCGGCGA
GCATGTGCTGACGAACTGGTTTTCCGAAGGTCTCACCACCTATTACGAGCATACCGCGCCATTCCGTGCGGGACGTGTTC
CGATGGAGGAATATGTCTCTGAGCTCAACGCGCTGAGCGAGCGATATTATACCAATCCGGCGCGGGAAATGTCTGCGATT
GAAATTGGCCAGGTGGGGTTCAATGACGGCCGCATCCGGCATGCGCCGTATGAGCGCGGCGCGCTTTATTTTGCCGATCT
GGATTCGCGCATCCGGGCCGCGAGCGGCGGGGCGCGCACGCTTGATATGCTGCTGCGCGAGGTATTCACGCTGCGCGAGC
GCGGCGATGTGGAGCTGACGATCGAGGCGTGGAGCGACTTCGTTTCCGCCGAGCTGGGCGCTGAAGAGGAAGCGTATGTT
CGCGCGCTGCATATCGACGGGCAGATGATCTATCCGGCGAGCGACGCGTTTGGCGCGTGTGTACGCGGTGTGCCTGCGAC
GCTGGAGGCCGAAGGCGATACATTTGAGGGCATGCAGTGGGAGCGGGTTGAGGGCGTGGCGCCGGAAGCCTGTTTTGCCA
GCATGGCGGCGGACTGA

Upstream 100 bases:

>100_bases
GGGGCATTCATGCAGAGGCGCACTATTCGGGCGCATTATCGAAAGGACTATTCTGCCATCCTTCAAGAAAGTTGCCCCTT
GAACTGGAGAGAGGCTGGCG

Downstream 100 bases:

>100_bases
AGCCCGTGACGCCAGGCGCCACAGACCGGAAAATGCTCTCCAGCGGGCGAACGCGCTGTGGAAGAACATTTATGCGCTGG
CGGCGGGCGCCAGCGCGGCC

Product: putative lipoprotein

Products: NA

Alternate protein names: Peptidase

Number of amino acids: Translated: 538; Mature: 537

Protein sequence:

>538_residues
MANARYRVGSVAACGVRSLRVAGSVFCTLMAAAACQAAPGETAPAAPAGPEASYEITLRPELGEDGMVEAIAVTSRLHGD
LKDGETRLKLSAPVVYVNVMGIADRILDLRVTDEAGPVAFTLEQDDPVPGGFPYFRHWTATRDVEFPLDISYRALVQPEG
GPSGPAFGIRPSKGGVSGSGAGYMIVPVNAEASQSVLEWDLTEFGPGAVGVTTFGEGRVTVNGPPAALMQGWLMAGQAGQ
YPPAEEESHFRAYWLGDFPFDVAAEMAYAKDLYDFFGEFFAYLDPAPDYRVFLRQLDTEPYGGATALANSFMLSRGPALP
EEMGGHSPRSTLAHEMIHMWVGGLSGEHVLTNWFSEGLTTYYEHTAPFRAGRVPMEEYVSELNALSERYYTNPAREMSAI
EIGQVGFNDGRIRHAPYERGALYFADLDSRIRAASGGARTLDMLLREVFTLRERGDVELTIEAWSDFVSAELGAEEEAYV
RALHIDGQMIYPASDAFGACVRGVPATLEAEGDTFEGMQWERVEGVAPEACFASMAAD

Sequences:

>Translated_538_residues
MANARYRVGSVAACGVRSLRVAGSVFCTLMAAAACQAAPGETAPAAPAGPEASYEITLRPELGEDGMVEAIAVTSRLHGD
LKDGETRLKLSAPVVYVNVMGIADRILDLRVTDEAGPVAFTLEQDDPVPGGFPYFRHWTATRDVEFPLDISYRALVQPEG
GPSGPAFGIRPSKGGVSGSGAGYMIVPVNAEASQSVLEWDLTEFGPGAVGVTTFGEGRVTVNGPPAALMQGWLMAGQAGQ
YPPAEEESHFRAYWLGDFPFDVAAEMAYAKDLYDFFGEFFAYLDPAPDYRVFLRQLDTEPYGGATALANSFMLSRGPALP
EEMGGHSPRSTLAHEMIHMWVGGLSGEHVLTNWFSEGLTTYYEHTAPFRAGRVPMEEYVSELNALSERYYTNPAREMSAI
EIGQVGFNDGRIRHAPYERGALYFADLDSRIRAASGGARTLDMLLREVFTLRERGDVELTIEAWSDFVSAELGAEEEAYV
RALHIDGQMIYPASDAFGACVRGVPATLEAEGDTFEGMQWERVEGVAPEACFASMAAD
>Mature_537_residues
ANARYRVGSVAACGVRSLRVAGSVFCTLMAAAACQAAPGETAPAAPAGPEASYEITLRPELGEDGMVEAIAVTSRLHGDL
KDGETRLKLSAPVVYVNVMGIADRILDLRVTDEAGPVAFTLEQDDPVPGGFPYFRHWTATRDVEFPLDISYRALVQPEGG
PSGPAFGIRPSKGGVSGSGAGYMIVPVNAEASQSVLEWDLTEFGPGAVGVTTFGEGRVTVNGPPAALMQGWLMAGQAGQY
PPAEEESHFRAYWLGDFPFDVAAEMAYAKDLYDFFGEFFAYLDPAPDYRVFLRQLDTEPYGGATALANSFMLSRGPALPE
EMGGHSPRSTLAHEMIHMWVGGLSGEHVLTNWFSEGLTTYYEHTAPFRAGRVPMEEYVSELNALSERYYTNPAREMSAIE
IGQVGFNDGRIRHAPYERGALYFADLDSRIRAASGGARTLDMLLREVFTLRERGDVELTIEAWSDFVSAELGAEEEAYVR
ALHIDGQMIYPASDAFGACVRGVPATLEAEGDTFEGMQWERVEGVAPEACFASMAAD

Specific function: Unknown

COG id: COG3975

COG function: function code R; Predicted protease with the C-terminal PDZ domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 58135; Mature: 58003

Theoretical pI: Translated: 4.29; Mature: 4.29

Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS00142 ZINC_PROTEASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MANARYRVGSVAACGVRSLRVAGSVFCTLMAAAACQAAPGETAPAAPAGPEASYEITLRP
CCCCCEECCCCHHHCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEECC
ELGEDGMVEAIAVTSRLHGDLKDGETRLKLSAPVVYVNVMGIADRILDLRVTDEAGPVAF
CCCCCCCHHHHHHHHHHCCCCCCCCEEEEEECCEEEEEEHHHHHHHEEEEEECCCCCEEE
TLEQDDPVPGGFPYFRHWTATRDVEFPLDISYRALVQPEGGPSGPAFGIRPSKGGVSGSG
EECCCCCCCCCCCHHHEECCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCC
AGYMIVPVNAEASQSVLEWDLTEFGPGAVGVTTFGEGRVTVNGPPAALMQGWLMAGQAGQ
CEEEEEECCCCCCHHHHHHHHHHCCCCCEEEEEECCCEEEECCCCHHHHHHHHHCCCCCC
YPPAEEESHFRAYWLGDFPFDVAAEMAYAKDLYDFFGEFFAYLDPAPDYRVFLRQLDTEP
CCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCC
YGGATALANSFMLSRGPALPEEMGGHSPRSTLAHEMIHMWVGGLSGEHVLTNWFSEGLTT
CCCHHHHHHHHHHHCCCCCHHHHCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHH
YYEHTAPFRAGRVPMEEYVSELNALSERYYTNPAREMSAIEIGQVGFNDGRIRHAPYERG
HHHCCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHEEECCCCCCCCEEEECCCCCC
ALYFADLDSRIRAASGGARTLDMLLREVFTLRERGDVELTIEAWSDFVSAELGAEEEAYV
EEEEECCCCHHHHCCCCHHHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHCCCCCCCEE
RALHIDGQMIYPASDAFGACVRGVPATLEAEGDTFEGMQWERVEGVAPEACFASMAAD
EEEEECCEEEECCCHHHHHHHCCCCCEEECCCCCCCCCCHHHHCCCCHHHHHHHHCCC
>Mature Secondary Structure 
ANARYRVGSVAACGVRSLRVAGSVFCTLMAAAACQAAPGETAPAAPAGPEASYEITLRP
CCCCEECCCCHHHCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCEEEEECC
ELGEDGMVEAIAVTSRLHGDLKDGETRLKLSAPVVYVNVMGIADRILDLRVTDEAGPVAF
CCCCCCCHHHHHHHHHHCCCCCCCCEEEEEECCEEEEEEHHHHHHHEEEEEECCCCCEEE
TLEQDDPVPGGFPYFRHWTATRDVEFPLDISYRALVQPEGGPSGPAFGIRPSKGGVSGSG
EECCCCCCCCCCCHHHEECCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCC
AGYMIVPVNAEASQSVLEWDLTEFGPGAVGVTTFGEGRVTVNGPPAALMQGWLMAGQAGQ
CEEEEEECCCCCCHHHHHHHHHHCCCCCEEEEEECCCEEEECCCCHHHHHHHHHCCCCCC
YPPAEEESHFRAYWLGDFPFDVAAEMAYAKDLYDFFGEFFAYLDPAPDYRVFLRQLDTEP
CCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHCCCC
YGGATALANSFMLSRGPALPEEMGGHSPRSTLAHEMIHMWVGGLSGEHVLTNWFSEGLTT
CCCHHHHHHHHHHHCCCCCHHHHCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHH
YYEHTAPFRAGRVPMEEYVSELNALSERYYTNPAREMSAIEIGQVGFNDGRIRHAPYERG
HHHCCCCCCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHEEECCCCCCCCEEEECCCCCC
ALYFADLDSRIRAASGGARTLDMLLREVFTLRERGDVELTIEAWSDFVSAELGAEEEAYV
EEEEECCCCHHHHCCCCHHHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHCCCCCCCEE
RALHIDGQMIYPASDAFGACVRGVPATLEAEGDTFEGMQWERVEGVAPEACFASMAAD
EEEEECCEEEECCCHHHHHHHCCCCCEEECCCCCCCCCCHHHHCCCCHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA