| Definition | Hyphomonas neptunium ATCC 15444 chromosome, complete genome. |
|---|---|
| Accession | NC_008358 |
| Length | 3,705,021 |
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The map label for this gene is gloB
Identifier: 114797885
GI number: 114797885
Start: 3549445
End: 3550215
Strand: Reverse
Name: gloB
Synonym: HNE_3406
Alternate gene names: 114797885
Gene position: 3550215-3549445 (Counterclockwise)
Preceding gene: 114798169
Following gene: 114798676
Centisome position: 95.82
GC content: 60.44
Gene sequence:
>771_bases ATGAGTGTCCTGATTGAAATACACCAGTTTCCCTGCCTGAACGATAATTACGGCTATCTGGTCCATGAACCCGGTTCGGG CCGCACGATTGCCATCGATACGCCGGACGCCGCTGTATATCTGGCAGAGGCGGAGAAGATGAGTTGGACCATCAGCGAAA TCTGGAACACCCACTGGCATCCCGATCATGCGGGGGGAAACCTCAAGATCAAGGAAGCCACCGGCTGCAAGATCATCGGC CCGGCCGGTGAGGCAGATAAAATCCCCGGCATCGACCGGCGCGTCAAAGGCGGCGATACCGTAGAGCTGGGCGGCGCAAC GGCGACCGTGATCGATGTGCCGGGCCACACGCTCGGCCATATCGCCTTTCACTTTCCCGATCAGGAAGCCGCCTTCGTCG GCGACGCTGTCTTCGCGCTGGGCTGTGGCCGCGTTTTCGAGGGCACGATGGAAATGATGTGGGAGAGCCTCAAGCGCATC AAGAAGCTGCCCAAGAAGACGCAGCTCTATTGCGCGCATGAATACACCGCCTCGAATGCAAAATTCGCCGTCACCATCGA GCCGGAAAACAAGGCGCTGAAGGAATATGTCGCCTGGATCGAGAAGCGCCGGGCCGAAGACAAGCCCACCGTGCCGGCGC TGCTGGAGCGGGAGCTGGAGACCAATCCCTTCCTGCGCGCAGACCTTCCCGAAATGCAGCTCGCCATGGGCCATGCGGGC AATGCGGCCGCCACGTTTGGCGAAATCCGCGGGCGGAAGGATCGCTTCTGA
Upstream 100 bases:
>100_bases TCGGACGCATAAAAGCGTTCAAGGGTGACGGCGTCCTGTCGCATCGTTATGGGTGGCTCGCGCGTTCCTGTTTCTGGGGG CCGGTAACTGGAGGTAAGAA
Downstream 100 bases:
>100_bases TGCGATCTGCCATTTCCGGCGATCTTGGCCCGAATGAAATCATCCGCATGCTTGGCCTGAGGCCCCATCCGGAAGGGGGC CATTATGGCGAGACATACAG
Product: putative hydroxyacylglutathione hydrolase
Products: NA
Alternate protein names: Glyoxalase II; Glx II
Number of amino acids: Translated: 256; Mature: 255
Protein sequence:
>256_residues MSVLIEIHQFPCLNDNYGYLVHEPGSGRTIAIDTPDAAVYLAEAEKMSWTISEIWNTHWHPDHAGGNLKIKEATGCKIIG PAGEADKIPGIDRRVKGGDTVELGGATATVIDVPGHTLGHIAFHFPDQEAAFVGDAVFALGCGRVFEGTMEMMWESLKRI KKLPKKTQLYCAHEYTASNAKFAVTIEPENKALKEYVAWIEKRRAEDKPTVPALLERELETNPFLRADLPEMQLAMGHAG NAAATFGEIRGRKDRF
Sequences:
>Translated_256_residues MSVLIEIHQFPCLNDNYGYLVHEPGSGRTIAIDTPDAAVYLAEAEKMSWTISEIWNTHWHPDHAGGNLKIKEATGCKIIG PAGEADKIPGIDRRVKGGDTVELGGATATVIDVPGHTLGHIAFHFPDQEAAFVGDAVFALGCGRVFEGTMEMMWESLKRI KKLPKKTQLYCAHEYTASNAKFAVTIEPENKALKEYVAWIEKRRAEDKPTVPALLERELETNPFLRADLPEMQLAMGHAG NAAATFGEIRGRKDRF >Mature_255_residues SVLIEIHQFPCLNDNYGYLVHEPGSGRTIAIDTPDAAVYLAEAEKMSWTISEIWNTHWHPDHAGGNLKIKEATGCKIIGP AGEADKIPGIDRRVKGGDTVELGGATATVIDVPGHTLGHIAFHFPDQEAAFVGDAVFALGCGRVFEGTMEMMWESLKRIK KLPKKTQLYCAHEYTASNAKFAVTIEPENKALKEYVAWIEKRRAEDKPTVPALLERELETNPFLRADLPEMQLAMGHAGN AAATFGEIRGRKDRF
Specific function: Thiolesterase that catalyzes the hydrolysis of S-D- lactoyl-glutathione to form glutathione and D-lactic acid
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the metallo-beta-lactamase superfamily. Glyoxalase II family
Homologues:
Organism=Homo sapiens, GI94538320, Length=261, Percent_Identity=33.7164750957854, Blast_Score=149, Evalue=2e-36, Organism=Homo sapiens, GI94538322, Length=261, Percent_Identity=33.7164750957854, Blast_Score=149, Evalue=2e-36, Organism=Homo sapiens, GI14150041, Length=228, Percent_Identity=33.7719298245614, Blast_Score=143, Evalue=2e-34, Organism=Homo sapiens, GI116642887, Length=239, Percent_Identity=34.3096234309623, Blast_Score=142, Evalue=2e-34, Organism=Homo sapiens, GI21703352, Length=239, Percent_Identity=34.3096234309623, Blast_Score=142, Evalue=4e-34, Organism=Homo sapiens, GI46361987, Length=205, Percent_Identity=31.219512195122, Blast_Score=119, Evalue=3e-27, Organism=Escherichia coli, GI1786406, Length=256, Percent_Identity=35.546875, Blast_Score=145, Evalue=2e-36, Organism=Caenorhabditis elegans, GI17536925, Length=252, Percent_Identity=34.1269841269841, Blast_Score=144, Evalue=4e-35, Organism=Saccharomyces cerevisiae, GI6320478, Length=267, Percent_Identity=33.7078651685393, Blast_Score=112, Evalue=4e-26, Organism=Saccharomyces cerevisiae, GI6324614, Length=243, Percent_Identity=32.0987654320988, Blast_Score=94, Evalue=3e-20, Organism=Drosophila melanogaster, GI21356335, Length=261, Percent_Identity=36.0153256704981, Blast_Score=178, Evalue=3e-45, Organism=Drosophila melanogaster, GI24667711, Length=261, Percent_Identity=36.0153256704981, Blast_Score=178, Evalue=3e-45, Organism=Drosophila melanogaster, GI24667703, Length=261, Percent_Identity=36.0153256704981, Blast_Score=178, Evalue=4e-45, Organism=Drosophila melanogaster, GI221330176, Length=167, Percent_Identity=29.940119760479, Blast_Score=79, Evalue=4e-15,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): GLO2_HYPNA (Q0BWR4)
Other databases:
- EMBL: CP000158 - RefSeq: YP_762079.1 - ProteinModelPortal: Q0BWR4 - SMR: Q0BWR4 - STRING: Q0BWR4 - GeneID: 4288675 - GenomeReviews: CP000158_GR - KEGG: hne:HNE_3406 - NMPDR: fig|228405.5.peg.3261 - TIGR: HNE_3406 - eggNOG: COG0491 - HOGENOM: HBG753931 - OMA: WCAHEYT - PhylomeDB: Q0BWR4 - BioCyc: HNEP81032:HNE_3406-MONOMER - HAMAP: MF_01374 - InterPro: IPR001279 - InterPro: IPR017782 - SMART: SM00849 - TIGRFAMs: TIGR03413
Pfam domain/function: PF00753 Lactamase_B
EC number: =3.1.2.6
Molecular weight: Translated: 28240; Mature: 28109
Theoretical pI: Translated: 6.18; Mature: 6.18
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 4.3 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSVLIEIHQFPCLNDNYGYLVHEPGSGRTIAIDTPDAAVYLAEAEKMSWTISEIWNTHWH CEEEEEEECCCCCCCCCCEEEECCCCCCEEEEECCCCEEEEEECCHHEEEHHHHCCCCCC PDHAGGNLKIKEATGCKIIGPAGEADKIPGIDRRVKGGDTVELGGATATVIDVPGHTLGH CCCCCCEEEEEECCCEEEECCCCCCCCCCCCCCCCCCCCEEEECCCEEEEEECCCCCEEE IAFHFPDQEAAFVGDAVFALGCGRVFEGTMEMMWESLKRIKKLPKKTQLYCAHEYTASNA EEEECCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCHHEEEEEEEEECCCC KFAVTIEPENKALKEYVAWIEKRRAEDKPTVPALLERELETNPFLRADLPEMQLAMGHAG EEEEEECCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCCEECCCCHHHHHHCCCC NAAATFGEIRGRKDRF CCHHHHHHHCCCCCCC >Mature Secondary Structure SVLIEIHQFPCLNDNYGYLVHEPGSGRTIAIDTPDAAVYLAEAEKMSWTISEIWNTHWH EEEEEEECCCCCCCCCCEEEECCCCCCEEEEECCCCEEEEEECCHHEEEHHHHCCCCCC PDHAGGNLKIKEATGCKIIGPAGEADKIPGIDRRVKGGDTVELGGATATVIDVPGHTLGH CCCCCCEEEEEECCCEEEECCCCCCCCCCCCCCCCCCCCEEEECCCEEEEEECCCCCEEE IAFHFPDQEAAFVGDAVFALGCGRVFEGTMEMMWESLKRIKKLPKKTQLYCAHEYTASNA EEEECCCCCHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCHHEEEEEEEEECCCC KFAVTIEPENKALKEYVAWIEKRRAEDKPTVPALLERELETNPFLRADLPEMQLAMGHAG EEEEEECCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCCCEECCCCHHHHHHCCCC NAAATFGEIRGRKDRF CCHHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA