Definition Hyphomonas neptunium ATCC 15444 chromosome, complete genome.
Accession NC_008358
Length 3,705,021

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The map label for this gene is 114797871

Identifier: 114797871

GI number: 114797871

Start: 3019963

End: 3020880

Strand: Reverse

Name: 114797871

Synonym: HNE_2862

Alternate gene names: NA

Gene position: 3020880-3019963 (Counterclockwise)

Preceding gene: 114798066

Following gene: 114799263

Centisome position: 81.53

GC content: 61.66

Gene sequence:

>918_bases
ATGAGCAAATACGATTCGCTCAATACCGTTGTGAATACGCTCACATATCTTGAGGTTTCGTCGACCAACAGCCGCCTGAG
CCGGATGGAATCGCAGCTCAACCGGGACATCATGCTGGCCCGCGAACAGGCCTACTCCCAACAGCGCGCCATCGATCAGG
TTTATGGCTTCATCAAGCAGTACGAGAAGCTGCGCGAGGCGAGCGATGCCGGCGCGCGGTTCCGCTATCTTCAGGCGACA
CTTCTGTCGATGGATCTGGAGCGTTTTGACGAAAGCGACCTGCCGGGCCTGGAAGACCGCCGCATTTTTCTCGACCTTCA
GAACGGGGTGGAAAGCCTGCGCAGCGCTCTGGGCGAAGAGATCGGGGACGACGGGCAGAAAGTCGTGCGGGATGTCATCC
ACCTGCCAGGTCTGATCGATACGGCGAAAGAGGAGTATGTTGCGCTTGAAGCGTTGAACGCTGCCAGGCGCGCGTGGCTT
GCCGGCGCATGGGGGACCATCCTGGTCGCGCTGGCGCTTCTGACGATACTCGCGGGGGCTTTTCTGCCATCCTATTGGGA
TACGCAATTTGCCGATCTGATGGGCGGTGATCAGAGTTATACGCTTGCCCCGATGCTGGCTTATGGGGGGCTGGCGGTTC
TGATCGCGCTGATCGCGCTGCGCTTCTTTGTACGGGCAGGCGCGCGCAAGCGCATCCGCCGGGCGGCGCAGGCGGCGGGA
TTTCAAGGCGTTTTGCCGATGAAGGGGGCGGGCGCGTCAAAGACCCGGTTTCTGAGCCTCGTGACCCAGATGCGGCACCT
CGGTGCCGATTCCGGCCCCTATGCCTATGACCGCACGACCAACAAGGCGATGCTGGCTGGGATTGAGGGGATGGAGGCGC
GGCTGACCGCGGCGCGGGATGGGCTGCACTCAAGCTGA

Upstream 100 bases:

>100_bases
GTTGGGACGGTTGATGTTTTGACATCGCGGACATGGTGCTTAAAACCCAACTGTCGTGAAGCAGCATGAACTGGCGGACC
TGGCCAGATAAGGGGGGCTC

Downstream 100 bases:

>100_bases
GGCGAGGGTTCAGAGCCCGAAATCGCCGCGCTCACGATACGCAATGATCGCCGCCAGAAAGGCGAGATTGTCGGCATAAA
GTGCTGTCGGCATATGATCG

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 305; Mature: 304

Protein sequence:

>305_residues
MSKYDSLNTVVNTLTYLEVSSTNSRLSRMESQLNRDIMLAREQAYSQQRAIDQVYGFIKQYEKLREASDAGARFRYLQAT
LLSMDLERFDESDLPGLEDRRIFLDLQNGVESLRSALGEEIGDDGQKVVRDVIHLPGLIDTAKEEYVALEALNAARRAWL
AGAWGTILVALALLTILAGAFLPSYWDTQFADLMGGDQSYTLAPMLAYGGLAVLIALIALRFFVRAGARKRIRRAAQAAG
FQGVLPMKGAGASKTRFLSLVTQMRHLGADSGPYAYDRTTNKAMLAGIEGMEARLTAARDGLHSS

Sequences:

>Translated_305_residues
MSKYDSLNTVVNTLTYLEVSSTNSRLSRMESQLNRDIMLAREQAYSQQRAIDQVYGFIKQYEKLREASDAGARFRYLQAT
LLSMDLERFDESDLPGLEDRRIFLDLQNGVESLRSALGEEIGDDGQKVVRDVIHLPGLIDTAKEEYVALEALNAARRAWL
AGAWGTILVALALLTILAGAFLPSYWDTQFADLMGGDQSYTLAPMLAYGGLAVLIALIALRFFVRAGARKRIRRAAQAAG
FQGVLPMKGAGASKTRFLSLVTQMRHLGADSGPYAYDRTTNKAMLAGIEGMEARLTAARDGLHSS
>Mature_304_residues
SKYDSLNTVVNTLTYLEVSSTNSRLSRMESQLNRDIMLAREQAYSQQRAIDQVYGFIKQYEKLREASDAGARFRYLQATL
LSMDLERFDESDLPGLEDRRIFLDLQNGVESLRSALGEEIGDDGQKVVRDVIHLPGLIDTAKEEYVALEALNAARRAWLA
GAWGTILVALALLTILAGAFLPSYWDTQFADLMGGDQSYTLAPMLAYGGLAVLIALIALRFFVRAGARKRIRRAAQAAGF
QGVLPMKGAGASKTRFLSLVTQMRHLGADSGPYAYDRTTNKAMLAGIEGMEARLTAARDGLHSS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 33583; Mature: 33452

Theoretical pI: Translated: 7.72; Mature: 7.72

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKYDSLNTVVNTLTYLEVSSTNSRLSRMESQLNRDIMLAREQAYSQQRAIDQVYGFIKQ
CCCHHHHHHHHHHHHHHEECCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHH
YEKLREASDAGARFRYLQATLLSMDLERFDESDLPGLEDRRIFLDLQNGVESLRSALGEE
HHHHHHHHCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEHHHHHHHHHHHHHHH
IGDDGQKVVRDVIHLPGLIDTAKEEYVALEALNAARRAWLAGAWGTILVALALLTILAGA
HCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FLPSYWDTQFADLMGGDQSYTLAPMLAYGGLAVLIALIALRFFVRAGARKRIRRAAQAAG
HCCCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
FQGVLPMKGAGASKTRFLSLVTQMRHLGADSGPYAYDRTTNKAMLAGIEGMEARLTAARD
CCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHCCCCHHHHHHHHHC
GLHSS
CCCCC
>Mature Secondary Structure 
SKYDSLNTVVNTLTYLEVSSTNSRLSRMESQLNRDIMLAREQAYSQQRAIDQVYGFIKQ
CCHHHHHHHHHHHHHHEECCCHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHH
YEKLREASDAGARFRYLQATLLSMDLERFDESDLPGLEDRRIFLDLQNGVESLRSALGEE
HHHHHHHHCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEHHHHHHHHHHHHHHH
IGDDGQKVVRDVIHLPGLIDTAKEEYVALEALNAARRAWLAGAWGTILVALALLTILAGA
HCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FLPSYWDTQFADLMGGDQSYTLAPMLAYGGLAVLIALIALRFFVRAGARKRIRRAAQAAG
HCCCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
FQGVLPMKGAGASKTRFLSLVTQMRHLGADSGPYAYDRTTNKAMLAGIEGMEARLTAARD
CCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHHHCCCCHHHHHHHHHC
GLHSS
CCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA