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The map label for this gene is omp85 [H]

Identifier: 114797815

GI number: 114797815

Start: 1819278

End: 1821842

Strand: Direct

Name: omp85 [H]

Synonym: HNE_1776

Alternate gene names: 114797815

Gene position: 1819278-1821842 (Clockwise)

Preceding gene: 114800133

Following gene: 114798539

Centisome position: 49.1

GC content: 53.68

Gene sequence:

>2565_bases
ATGCTTAAGTTCCTCGCGGCCACTATTCTTGCGACGAGTGCTCTTGGTTTGGGAGTGAGCGGCTTTGGCCTCACTGCAAG
TGCGCAAGAGGACGCTCTCTATGGCGGAACGATCAGAACCATCCTGGTCGAAGGTAATCAGCGCATTGAGGCACGTACCG
TTCAGTCCTACCTCCTTGTGGAACCCGGAGATGCATTTGATCCCGACAGAATTGACCTTTCGCTGAAAACGCTTTTCGCG
ACAAATCTGTTTGCGGATGTATCGATTGATCGCCGCGGAAATGACCTGGTTATTCAAGTTGTCGAAAACCCGATCATTAA
CCGGGTTATCTTCGAAGGTAATCGGGCTTTGAAAGACGACAAGCTGCGTGAAGAAATTCAGGCCGCGCCGCGGGGTATCT
TTACTGCCGCGCGCGTTCAGTCAGACGTGCAGCGGATCATGGAGCTCTATCGCCGGTCCGGCAGATTTGCTGCCAAGGTA
GAGCCGCAATACAAGCCTTTGGAGCAAAACCGCGTTGACTTGATTTTTGAAGTTACGGAAGGGCCCGTTACCGGGGTCCG
GTCGATCAACTTCATCGGCAACAAGGCATATTCCGATTCAAGGCTGCGCAGCGAGATTGTAACAAAACAATCACGCCTCT
GGCGCTTTTTCAGCTCAAACGACAACTACGATTCCAATCGATTGGAATATGACCGTGAGCAGCTGCGCGAGTTCTATCAA
AACAACGGCTACTACGATTTCCGCGTTACATCTGCAGTCGCGGAGCTCGCTCCAGACCAGAAAGACTTCTACATAACGTA
TACGGTAGACGAGGGACGCCAATACGATTTCGGGGCAATCAAAGTAGAGACCGCGCTGGAAAAACTCGACGCTGACGTTC
TTCGCGCAGTTGTTCCGATCACGGAGGGGGATCTTTTTCGCGGAAATCAGATTGAGGCGACGATCGATAGCCTGACATAC
GCAGCGGGCGTGGCGGGCTACGCTTTCGTAGATGTCCGCCCACAAATCAGTGTCAATGAAGAAACCGGCCGCATAGATAT
TACGTTCGCTATCGATGAGGGCCCACGTGTTTACATCGACCGGATCAACATTGTTGGAAACACGCAGACACTGGACCGCG
TGATCCGCCGGGAATTGCGGTTGTCCGAAGGTGATGCATTCAACCGAATTCTGCTCGACAGGTCTCGTAACCGCGTCCGC
GCGTTGGGCTTCTTCGAGGATGTTGAAGTAGTCGAGACACCCAGCGAGCAACCCGACAGAACCATCGTGGATATCAAGGT
AAAAGAGCAATCGACAGGCGAACTGTCGTTCGCGGCCGGCTTCTCTTCCGTTGATGCTTACCTGTTCGATCTCAGCGCAT
CTCAGCGAAACCTACGGGGGCGTGGCCAGTCTGTTGTTGCCAGAACGTCGCTCTCCAGCCGTCAACAGATTGTGGACCTT
CGGTTCACTGAGCCACGCTTCCTCGATCGTAACCTTTCCGCTGGTGTGGACCTGTTCGCCACCCGGCAGGATTTTGAAGA
GTACACAGGCTTTACCAGCGAAACGATTGGCGGCGGTGTGCGTATGGCATTCCCCCTGACGGACCGCATGCAAATGGGTG
TCCGTTATCGTCTTCAGACAGACGATGTGAGCATTGCGGATCAGAACATCGTCATCGACTCGAATGGGATGCTCGTTCGC
ACACGAACGCAGATTGCCGGTCAGGATACCCCAAACGATCTTTCGGACGATATATACCGGCTACCGGAACCCGGCGATGA
AGGGCCAGGTGAGGCGGTCGTTGATATCTGTAACCCTGGATACGTGCTTAGAAATACAATTTGCCGTTCTGAGCGTAGCG
ATATTTCCAGCATCGTTGGATACGATTTCTTCTGGGATCAAACCAATGATCCCATTTCGCCAACCCGAGGTTTTAATCTG
CGCTTCAGTCAGGATCTGGCCGGCTTGGGCGGAGACGTGAAATATATCCGTACTGAGACTGGTGCGTCTTTCTACCGTGG
AATTTGGCGCGATGTGGTAGCAAGCGCCAACTTCTCCGGCGGCTTGGTTGTGCCTCTTGATGAAGAGCAAGGCGTTCGAA
TCAACAATCGCTTCTTCCGCGGGGGCAGCACGTTCCGCGGATTTGATGTGGCGGGCCTTGGGCCACGCGAAATCCTTCGT
CTCATTGATCCGGCGACAGGCGAGTTGCTGGGCACTCAGAGACTTAATTCACTCGGCGGAAATGCATATTATCAGGGTAC
GTTTGAGCTGACTGTCCCCAATTTCGTTCCCGAAGAATATGGCATCAAGAGCGCCTTGTTCCTCGACGTGGGATCTCTGG
GTCTGCTTGAAGATGTTGATAAGGGGAGCACGGTCATCCTCGAAGATGGCGGGCCCTTCGGTTATCCGGGCGTCACCGCC
ATTCGAACAACAAAAGACGCGGCGGCGCTTCGCGCATCTGCCGGTATAAGCGTGTTTTGGGATTCTCCATTCGGTCCCAT
CCGCTTCGACTTCTCGCATATTCTCCGCAAGGAGGATTACGACAGGACGGAAACCTTCCGGTTCTCGACCTCAACGCGGT
TCTAA

Upstream 100 bases:

>100_bases
GGTGGTGGTTATCACATGGGGAGATGTGATTGAAACGGGCGTGTTTGGACGGGGAGGCGGCTGACAATCTGTCAGCCCGG
TACGGAGAGTGATATCCATA

Downstream 100 bases:

>100_bases
TATCGCAAGCCCCAGAGTAGGACGAACTAACTATGTCAATCTTCAGAACTTTCGTTGCCGCCGTGATGCTGGCTGCGGCT
GTTTCGCTGCCGGCATTCCA

Product: OMP85 family outer membrane protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 854; Mature: 854

Protein sequence:

>854_residues
MLKFLAATILATSALGLGVSGFGLTASAQEDALYGGTIRTILVEGNQRIEARTVQSYLLVEPGDAFDPDRIDLSLKTLFA
TNLFADVSIDRRGNDLVIQVVENPIINRVIFEGNRALKDDKLREEIQAAPRGIFTAARVQSDVQRIMELYRRSGRFAAKV
EPQYKPLEQNRVDLIFEVTEGPVTGVRSINFIGNKAYSDSRLRSEIVTKQSRLWRFFSSNDNYDSNRLEYDREQLREFYQ
NNGYYDFRVTSAVAELAPDQKDFYITYTVDEGRQYDFGAIKVETALEKLDADVLRAVVPITEGDLFRGNQIEATIDSLTY
AAGVAGYAFVDVRPQISVNEETGRIDITFAIDEGPRVYIDRINIVGNTQTLDRVIRRELRLSEGDAFNRILLDRSRNRVR
ALGFFEDVEVVETPSEQPDRTIVDIKVKEQSTGELSFAAGFSSVDAYLFDLSASQRNLRGRGQSVVARTSLSSRQQIVDL
RFTEPRFLDRNLSAGVDLFATRQDFEEYTGFTSETIGGGVRMAFPLTDRMQMGVRYRLQTDDVSIADQNIVIDSNGMLVR
TRTQIAGQDTPNDLSDDIYRLPEPGDEGPGEAVVDICNPGYVLRNTICRSERSDISSIVGYDFFWDQTNDPISPTRGFNL
RFSQDLAGLGGDVKYIRTETGASFYRGIWRDVVASANFSGGLVVPLDEEQGVRINNRFFRGGSTFRGFDVAGLGPREILR
LIDPATGELLGTQRLNSLGGNAYYQGTFELTVPNFVPEEYGIKSALFLDVGSLGLLEDVDKGSTVILEDGGPFGYPGVTA
IRTTKDAAALRASAGISVFWDSPFGPIRFDFSHILRKEDYDRTETFRFSTSTRF

Sequences:

>Translated_854_residues
MLKFLAATILATSALGLGVSGFGLTASAQEDALYGGTIRTILVEGNQRIEARTVQSYLLVEPGDAFDPDRIDLSLKTLFA
TNLFADVSIDRRGNDLVIQVVENPIINRVIFEGNRALKDDKLREEIQAAPRGIFTAARVQSDVQRIMELYRRSGRFAAKV
EPQYKPLEQNRVDLIFEVTEGPVTGVRSINFIGNKAYSDSRLRSEIVTKQSRLWRFFSSNDNYDSNRLEYDREQLREFYQ
NNGYYDFRVTSAVAELAPDQKDFYITYTVDEGRQYDFGAIKVETALEKLDADVLRAVVPITEGDLFRGNQIEATIDSLTY
AAGVAGYAFVDVRPQISVNEETGRIDITFAIDEGPRVYIDRINIVGNTQTLDRVIRRELRLSEGDAFNRILLDRSRNRVR
ALGFFEDVEVVETPSEQPDRTIVDIKVKEQSTGELSFAAGFSSVDAYLFDLSASQRNLRGRGQSVVARTSLSSRQQIVDL
RFTEPRFLDRNLSAGVDLFATRQDFEEYTGFTSETIGGGVRMAFPLTDRMQMGVRYRLQTDDVSIADQNIVIDSNGMLVR
TRTQIAGQDTPNDLSDDIYRLPEPGDEGPGEAVVDICNPGYVLRNTICRSERSDISSIVGYDFFWDQTNDPISPTRGFNL
RFSQDLAGLGGDVKYIRTETGASFYRGIWRDVVASANFSGGLVVPLDEEQGVRINNRFFRGGSTFRGFDVAGLGPREILR
LIDPATGELLGTQRLNSLGGNAYYQGTFELTVPNFVPEEYGIKSALFLDVGSLGLLEDVDKGSTVILEDGGPFGYPGVTA
IRTTKDAAALRASAGISVFWDSPFGPIRFDFSHILRKEDYDRTETFRFSTSTRF
>Mature_854_residues
MLKFLAATILATSALGLGVSGFGLTASAQEDALYGGTIRTILVEGNQRIEARTVQSYLLVEPGDAFDPDRIDLSLKTLFA
TNLFADVSIDRRGNDLVIQVVENPIINRVIFEGNRALKDDKLREEIQAAPRGIFTAARVQSDVQRIMELYRRSGRFAAKV
EPQYKPLEQNRVDLIFEVTEGPVTGVRSINFIGNKAYSDSRLRSEIVTKQSRLWRFFSSNDNYDSNRLEYDREQLREFYQ
NNGYYDFRVTSAVAELAPDQKDFYITYTVDEGRQYDFGAIKVETALEKLDADVLRAVVPITEGDLFRGNQIEATIDSLTY
AAGVAGYAFVDVRPQISVNEETGRIDITFAIDEGPRVYIDRINIVGNTQTLDRVIRRELRLSEGDAFNRILLDRSRNRVR
ALGFFEDVEVVETPSEQPDRTIVDIKVKEQSTGELSFAAGFSSVDAYLFDLSASQRNLRGRGQSVVARTSLSSRQQIVDL
RFTEPRFLDRNLSAGVDLFATRQDFEEYTGFTSETIGGGVRMAFPLTDRMQMGVRYRLQTDDVSIADQNIVIDSNGMLVR
TRTQIAGQDTPNDLSDDIYRLPEPGDEGPGEAVVDICNPGYVLRNTICRSERSDISSIVGYDFFWDQTNDPISPTRGFNL
RFSQDLAGLGGDVKYIRTETGASFYRGIWRDVVASANFSGGLVVPLDEEQGVRINNRFFRGGSTFRGFDVAGLGPREILR
LIDPATGELLGTQRLNSLGGNAYYQGTFELTVPNFVPEEYGIKSALFLDVGSLGLLEDVDKGSTVILEDGGPFGYPGVTA
IRTTKDAAALRASAGISVFWDSPFGPIRFDFSHILRKEDYDRTETFRFSTSTRF

Specific function: Unknown

COG id: COG4775

COG function: function code M; Outer membrane protein/protective antigen OMA87

Gene ontology:

Cell location: Cell outer membrane (Potential) [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the surface antigen D15 family [H]

Homologues:

Organism=Escherichia coli, GI1786374, Length=885, Percent_Identity=26.1016949152542, Blast_Score=273, Evalue=4e-74,

Paralogues:

None

Copy number: 180 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 80 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 380 Molecules/Cell In: Growth-Phase, Minimal-Media (Based on E. coli). 220 Molecules/Cell In: Stationary Phase, Ri

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000184
- InterPro:   IPR016474
- InterPro:   IPR010827 [H]

Pfam domain/function: PF01103 Bac_surface_Ag; PF07244 Surf_Ag_VNR [H]

EC number: NA

Molecular weight: Translated: 95397; Mature: 95397

Theoretical pI: Translated: 4.58; Mature: 4.58

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
0.9 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
0.7 %Met     (Mature Protein)
0.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLKFLAATILATSALGLGVSGFGLTASAQEDALYGGTIRTILVEGNQRIEARTVQSYLLV
CHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEECCEEEEEEEECCCEEEHEEEEEEEEE
EPGDAFDPDRIDLSLKTLFATNLFADVSIDRRGNDLVIQVVENPIINRVIFEGNRALKDD
CCCCCCCCCCEEEEHHHHHHHHHEEEEEECCCCCCEEEEEECCCHHCEEEECCCCCCCHH
KLREEIQAAPRGIFTAARVQSDVQRIMELYRRSGRFAAKVEPQYKPLEQNRVDLIFEVTE
HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCEEEEEEECC
GPVTGVRSINFIGNKAYSDSRLRSEIVTKQSRLWRFFSSNDNYDSNRLEYDREQLREFYQ
CCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHEECCCCCCCCCCHHHHHHHHHHHHH
NNGYYDFRVTSAVAELAPDQKDFYITYTVDEGRQYDFGAIKVETALEKLDADVLRAVVPI
CCCEEEEEHHHHHHHHCCCCCCEEEEEEECCCCEECCCEEEHHHHHHHHCHHHHHHHHCC
TEGDLFRGNQIEATIDSLTYAAGVAGYAFVDVRPQISVNEETGRIDITFAIDEGPRVYID
CCCCCCCCCEEEEHHHHHHHHHCCCCEEEEEECCCEEECCCCCEEEEEEEECCCCEEEEE
RINIVGNTQTLDRVIRRELRLSEGDAFNRILLDRSRNRVRALGFFEDVEVVETPSEQPDR
EEEEECCHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCCEEEECCHHCCHHEECCCCCCCC
TIVDIKVKEQSTGELSFAAGFSSVDAYLFDLSASQRNLRGRGQSVVARTSLSSRQQIVDL
EEEEEEEECCCCCCEEEECCCCHHEEEEEECCCCHHHHCCCCCEEEEECCHHCCCEEEEE
RFTEPRFLDRNLSAGVDLFATRQDFEEYTGFTSETIGGGVRMAFPLTDRMQMGVRYRLQT
EECCCHHHCCCCCCCCEEEEEHHHHHHHCCCCCHHCCCCEEEEECCCHHHHCCEEEEEEC
DDVSIADQNIVIDSNGMLVRTRTQIAGQDTPNDLSDDIYRLPEPGDEGPGEAVVDICNPG
CCEEEECCEEEECCCCEEEEEEHHCCCCCCCCCCCHHHEECCCCCCCCCCCEEEEECCCC
YVLRNTICRSERSDISSIVGYDFFWDQTNDPISPTRGFNLRFSQDLAGLGGDVKYIRTET
HHHHHHHHHCHHHHHHHHHCCEEEECCCCCCCCCCCCCCEEECCHHHCCCCCEEEEEECC
GASFYRGIWRDVVASANFSGGLVVPLDEEQGVRINNRFFRGGSTFRGFDVAGLGPREILR
CCHHHHHHHHHHHHCCCCCCCEEEEECCCCCCEEECEEEECCCCCCCEEECCCCHHHHHH
LIDPATGELLGTQRLNSLGGNAYYQGTFELTVPNFVPEEYGIKSALFLDVGSLGLLEDVD
HHCCCCCCHHHHHHHHHCCCCEEEEEEEEEECCCCCCHHHCCCEEEEEECCCCCCHHHCC
KGSTVILEDGGPFGYPGVTAIRTTKDAAALRASAGISVFWDSPFGPIRFDFSHILRKEDY
CCCEEEEECCCCCCCCCCEEEEECCHHHHHHHCCCEEEEECCCCCCEEECHHHHHCCCCC
DRTETFRFSTSTRF
CCCCEEEEECCCCC
>Mature Secondary Structure
MLKFLAATILATSALGLGVSGFGLTASAQEDALYGGTIRTILVEGNQRIEARTVQSYLLV
CHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEECCEEEEEEEECCCEEEHEEEEEEEEE
EPGDAFDPDRIDLSLKTLFATNLFADVSIDRRGNDLVIQVVENPIINRVIFEGNRALKDD
CCCCCCCCCCEEEEHHHHHHHHHEEEEEECCCCCCEEEEEECCCHHCEEEECCCCCCCHH
KLREEIQAAPRGIFTAARVQSDVQRIMELYRRSGRFAAKVEPQYKPLEQNRVDLIFEVTE
HHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCEEEEEEECC
GPVTGVRSINFIGNKAYSDSRLRSEIVTKQSRLWRFFSSNDNYDSNRLEYDREQLREFYQ
CCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHEECCCCCCCCCCHHHHHHHHHHHHH
NNGYYDFRVTSAVAELAPDQKDFYITYTVDEGRQYDFGAIKVETALEKLDADVLRAVVPI
CCCEEEEEHHHHHHHHCCCCCCEEEEEEECCCCEECCCEEEHHHHHHHHCHHHHHHHHCC
TEGDLFRGNQIEATIDSLTYAAGVAGYAFVDVRPQISVNEETGRIDITFAIDEGPRVYID
CCCCCCCCCEEEEHHHHHHHHHCCCCEEEEEECCCEEECCCCCEEEEEEEECCCCEEEEE
RINIVGNTQTLDRVIRRELRLSEGDAFNRILLDRSRNRVRALGFFEDVEVVETPSEQPDR
EEEEECCHHHHHHHHHHHHCCCCCCCHHHHHHHCCCCCEEEECCHHCCHHEECCCCCCCC
TIVDIKVKEQSTGELSFAAGFSSVDAYLFDLSASQRNLRGRGQSVVARTSLSSRQQIVDL
EEEEEEEECCCCCCEEEECCCCHHEEEEEECCCCHHHHCCCCCEEEEECCHHCCCEEEEE
RFTEPRFLDRNLSAGVDLFATRQDFEEYTGFTSETIGGGVRMAFPLTDRMQMGVRYRLQT
EECCCHHHCCCCCCCCEEEEEHHHHHHHCCCCCHHCCCCEEEEECCCHHHHCCEEEEEEC
DDVSIADQNIVIDSNGMLVRTRTQIAGQDTPNDLSDDIYRLPEPGDEGPGEAVVDICNPG
CCEEEECCEEEECCCCEEEEEEHHCCCCCCCCCCCHHHEECCCCCCCCCCCEEEEECCCC
YVLRNTICRSERSDISSIVGYDFFWDQTNDPISPTRGFNLRFSQDLAGLGGDVKYIRTET
HHHHHHHHHCHHHHHHHHHCCEEEECCCCCCCCCCCCCCEEECCHHHCCCCCEEEEEECC
GASFYRGIWRDVVASANFSGGLVVPLDEEQGVRINNRFFRGGSTFRGFDVAGLGPREILR
CCHHHHHHHHHHHHCCCCCCCEEEEECCCCCCEEECEEEECCCCCCCEEECCCCHHHHHH
LIDPATGELLGTQRLNSLGGNAYYQGTFELTVPNFVPEEYGIKSALFLDVGSLGLLEDVD
HHCCCCCCHHHHHHHHHCCCCEEEEEEEEEECCCCCCHHHCCCEEEEEECCCCCCHHHCC
KGSTVILEDGGPFGYPGVTAIRTTKDAAALRASAGISVFWDSPFGPIRFDFSHILRKEDY
CCCEEEEECCCCCCCCCCEEEEECCHHHHHHHCCCEEEEECCCCCCEEECHHHHHCCCCC
DRTETFRFSTSTRF
CCCCEEEEECCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 10710307 [H]