Click here to switch to the map view.

The map label for this gene is ydiS [C]

Identifier: 114797800

GI number: 114797800

Start: 1975898

End: 1977577

Strand: Direct

Name: ydiS [C]

Synonym: HNE_1909

Alternate gene names: 114797800

Gene position: 1975898-1977577 (Clockwise)

Preceding gene: 114799154

Following gene: 114799202

Centisome position: 53.33

GC content: 61.73

Gene sequence:

>1680_bases
ATGGCGGAGACCCCTGAGCGTGAGTCGATGGAGTTCGACCTGGTTATCGTTGGTGGCGGCCCCGCAGGGCTGTCTGCCGC
GATCCGGTTCAAACAGCTCGCGAACGAAGCCGGTGAAGACCTTTCTGTGGTCGTCATCGAAAAAGGCGGCGAGATCGGCG
CGCACATCCTATCGGGCGTGGTCATGGACCCGGTCGGCCTCGATCAGCTGATTCCCGACTGGCGGACCCGCGACGACCGG
CCGCTGAAAACCGAAGTGGATGATGACAAGTTCATCTTCCTAGGCCCCAGCGGCGCAGCCGACATCTCCTGGCTGCCGAT
GCCCCCCTTCATGAAGAACCACGGCAACTTCACGGGCTCGCTGGCCAACGTCACCCGCTGGCTCGGCGCAGAAGCGGAAA
AGCTCGGCGTGGAAGTCTTCCCCGGCTTTGCCGCTTCCGAACTCGTCTATGACGACAAGGGCGCCGTCAAAGGCATCGTC
GCCGGCGTCATGGGCATCGGCGCCGATGGCCAGCCCAAGGACGACTACCAGCCCGGCATGGAACTGCTTGGCAAATATGT
CCTCTTCGCCGAAGGCGCCCGCGGTTCGCTGACCAAGCAGCTGATCAACAAGTTCAATCTCGATGAAGGCCGCGATCCGC
AGAAATACGGCATCGGCCTCAAAGAGGTGTGGTCTGTTCCGGAAGAGAACTTCAAGGAAGGCTATGTCCAGCACACGATG
GGCTGGCCGCTCGACAACAAGACCGGCGGCGGCAGCTTCCTCTATCACTTCCGTGATAATGGCGAGCCGTTCATCACGGT
CGGCTTCGTGGTCCACCTGAACTACGCCAACCCCTACATCTCGCCTTATGACGAGTTCCAGCGGTTCAAGCATCATGATG
CCGTCTCGCCCTTCCTGAAGGGCGGCAAGCGCGTGGCTTACGGCGCGCGCGCGATCACCGAGGGTGGCTTCCAGTCGGTC
CCCAAGCTCGCCTTCCCCGGCGGCGCGCTGATCGGCTGCGGCGCCGGTTTCGTCAACGTGCCGCGCATCAAGGGCAGCCA
CAACGCGATCCTCACCGGCATGATGGGCGCAGAAGCCGCCTTTGAAGCCATCCGCGAAGGCCGCTCGGGCGACACGCTGG
ACCATTACGAAGAGGCCTATGCGGGCTCCTCGGTCTACAAGGAACTCAAGACCGTGCGGAACGTGAAGCCGCTCTGGTCG
AAACTCGGCACCGCGCTCGGCATTCCGATGGGCGGCCTGGACATGTGGACGAACACCCTCTTCGGCTTCTCCTTCTTCGG
CACGCTCAGCCACGGCAAGACCGATGCCGCTTCGCTGAAACCGGCGAAGAACTTCAAGCCGATCGAGTATCCGCGTCCGG
ACGGCGTGCTCAGCTTCGACAAGCTGACCAACGTGTCCTTCACCAACACCTATCACGAGGAAGACCAGCCGGTTCACCTC
AAGGTGAAGGATCTGGCTTTGCAGAAATCGTCCGAATACGACGTGTATGCCGGCCCTTCGGCGCGGTATTGCCCGGCGGG
CGTGTATGAGTGGGTCAAAGATGAAGGCGGCGCGATGCGCTTCCAGATCAACTCGCAGAACTGCATCCACTGCAAGACCT
GTGACATCAAGGACCCCAACCTAAACATCAACTGGACGGTTCCGGAAGGCGGCGGCGGGCCCGCCTATTCCAATACCTGA

Upstream 100 bases:

>100_bases
AGGGGGTGACATTGCGGACAGGCTGGACCTTCGGGAAACAGGCTGTAAGTGCTAACCCGGATACAGATATAAGGCGCAAA
GCGCAAACAAGGAGCAGCTT

Downstream 100 bases:

>100_bases
TCCTTGACGGCTGACTGACGCCGCCCGCTTTGCGGGCGGCGTTTTCACCTTCACGTCATTCGAGCTGCGGCCGCCTTGCT
CTTGCCTCAAGGGACTGCTT

Product: putative electron transfer flavoprotein-ubiquinone oxidoreductase

Products: NA

Alternate protein names: ETF-QO; ETF-ubiquinone oxidoreductase; Electron-transferring-flavoprotein dehydrogenase; ETF dehydrogenase [H]

Number of amino acids: Translated: 559; Mature: 558

Protein sequence:

>559_residues
MAETPERESMEFDLVIVGGGPAGLSAAIRFKQLANEAGEDLSVVVIEKGGEIGAHILSGVVMDPVGLDQLIPDWRTRDDR
PLKTEVDDDKFIFLGPSGAADISWLPMPPFMKNHGNFTGSLANVTRWLGAEAEKLGVEVFPGFAASELVYDDKGAVKGIV
AGVMGIGADGQPKDDYQPGMELLGKYVLFAEGARGSLTKQLINKFNLDEGRDPQKYGIGLKEVWSVPEENFKEGYVQHTM
GWPLDNKTGGGSFLYHFRDNGEPFITVGFVVHLNYANPYISPYDEFQRFKHHDAVSPFLKGGKRVAYGARAITEGGFQSV
PKLAFPGGALIGCGAGFVNVPRIKGSHNAILTGMMGAEAAFEAIREGRSGDTLDHYEEAYAGSSVYKELKTVRNVKPLWS
KLGTALGIPMGGLDMWTNTLFGFSFFGTLSHGKTDAASLKPAKNFKPIEYPRPDGVLSFDKLTNVSFTNTYHEEDQPVHL
KVKDLALQKSSEYDVYAGPSARYCPAGVYEWVKDEGGAMRFQINSQNCIHCKTCDIKDPNLNINWTVPEGGGGPAYSNT

Sequences:

>Translated_559_residues
MAETPERESMEFDLVIVGGGPAGLSAAIRFKQLANEAGEDLSVVVIEKGGEIGAHILSGVVMDPVGLDQLIPDWRTRDDR
PLKTEVDDDKFIFLGPSGAADISWLPMPPFMKNHGNFTGSLANVTRWLGAEAEKLGVEVFPGFAASELVYDDKGAVKGIV
AGVMGIGADGQPKDDYQPGMELLGKYVLFAEGARGSLTKQLINKFNLDEGRDPQKYGIGLKEVWSVPEENFKEGYVQHTM
GWPLDNKTGGGSFLYHFRDNGEPFITVGFVVHLNYANPYISPYDEFQRFKHHDAVSPFLKGGKRVAYGARAITEGGFQSV
PKLAFPGGALIGCGAGFVNVPRIKGSHNAILTGMMGAEAAFEAIREGRSGDTLDHYEEAYAGSSVYKELKTVRNVKPLWS
KLGTALGIPMGGLDMWTNTLFGFSFFGTLSHGKTDAASLKPAKNFKPIEYPRPDGVLSFDKLTNVSFTNTYHEEDQPVHL
KVKDLALQKSSEYDVYAGPSARYCPAGVYEWVKDEGGAMRFQINSQNCIHCKTCDIKDPNLNINWTVPEGGGGPAYSNT
>Mature_558_residues
AETPERESMEFDLVIVGGGPAGLSAAIRFKQLANEAGEDLSVVVIEKGGEIGAHILSGVVMDPVGLDQLIPDWRTRDDRP
LKTEVDDDKFIFLGPSGAADISWLPMPPFMKNHGNFTGSLANVTRWLGAEAEKLGVEVFPGFAASELVYDDKGAVKGIVA
GVMGIGADGQPKDDYQPGMELLGKYVLFAEGARGSLTKQLINKFNLDEGRDPQKYGIGLKEVWSVPEENFKEGYVQHTMG
WPLDNKTGGGSFLYHFRDNGEPFITVGFVVHLNYANPYISPYDEFQRFKHHDAVSPFLKGGKRVAYGARAITEGGFQSVP
KLAFPGGALIGCGAGFVNVPRIKGSHNAILTGMMGAEAAFEAIREGRSGDTLDHYEEAYAGSSVYKELKTVRNVKPLWSK
LGTALGIPMGGLDMWTNTLFGFSFFGTLSHGKTDAASLKPAKNFKPIEYPRPDGVLSFDKLTNVSFTNTYHEEDQPVHLK
VKDLALQKSSEYDVYAGPSARYCPAGVYEWVKDEGGAMRFQINSQNCIHCKTCDIKDPNLNINWTVPEGGGGPAYSNT

Specific function: Accepts electrons from ETF and reduces ubiquinone [H]

COG id: COG0644

COG function: function code C; Dehydrogenases (flavoproteins)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 4Fe-4S ferredoxin-type domain [H]

Homologues:

Organism=Homo sapiens, GI119703746, Length=559, Percent_Identity=50.8050089445438, Blast_Score=565, Evalue=1e-161,
Organism=Escherichia coli, GI1787991, Length=401, Percent_Identity=27.930174563591, Blast_Score=110, Evalue=2e-25,
Organism=Escherichia coli, GI1786227, Length=337, Percent_Identity=27.0029673590504, Blast_Score=96, Evalue=9e-21,
Organism=Escherichia coli, GI87082155, Length=377, Percent_Identity=25.7294429708223, Blast_Score=90, Evalue=3e-19,
Organism=Caenorhabditis elegans, GI25144720, Length=561, Percent_Identity=50.9803921568627, Blast_Score=552, Evalue=1e-157,
Organism=Saccharomyces cerevisiae, GI6324932, Length=576, Percent_Identity=47.5694444444444, Blast_Score=507, Evalue=1e-144,
Organism=Drosophila melanogaster, GI24652256, Length=563, Percent_Identity=54.7069271758437, Blast_Score=583, Evalue=1e-166,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR017896
- InterPro:   IPR007859
- InterPro:   IPR003042 [H]

Pfam domain/function: PF05187 ETF_QO [H]

EC number: =1.5.5.1 [H]

Molecular weight: Translated: 60803; Mature: 60672

Theoretical pI: Translated: 5.38; Mature: 5.38

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAETPERESMEFDLVIVGGGPAGLSAAIRFKQLANEAGEDLSVVVIEKGGEIGAHILSGV
CCCCCCCCCEEEEEEEECCCCHHHHHHHHHHHHHHHCCCCEEEEEEECCCCHHHHHHHHH
VMDPVGLDQLIPDWRTRDDRPLKTEVDDDKFIFLGPSGAADISWLPMPPFMKNHGNFTGS
HCCCCCHHHHCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCEECCCCCHHHCCCCCCCH
LANVTRWLGAEAEKLGVEVFPGFAASELVYDDKGAVKGIVAGVMGIGADGQPKDDYQPGM
HHHHHHHHCCCHHHCCEEECCCCCHHHEEECCCCHHHHHHHHHHHCCCCCCCCCCCHHHH
ELLGKYVLFAEGARGSLTKQLINKFNLDEGRDPQKYGIGLKEVWSVPEENFKEGYVQHTM
HHHHCEEEEECCCCCHHHHHHHHHCCCCCCCCHHHHCCCHHHHHCCCHHHHHHHHHHHHC
GWPLDNKTGGGSFLYHFRDNGEPFITVGFVVHLNYANPYISPYDEFQRFKHHDAVSPFLK
CCCCCCCCCCCEEEEEEECCCCCEEEEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHH
GGKRVAYGARAITEGGFQSVPKLAFPGGALIGCGAGFVNVPRIKGSHNAILTGMMGAEAA
CCCEEEECCHHHCCCCHHCCCCCCCCCCCEEECCCCCEECCCCCCCCCEEEEECHHHHHH
FEAIREGRSGDTLDHYEEAYAGSSVYKELKTVRNVKPLWSKLGTALGIPMGGLDMWTNTL
HHHHHCCCCCCCHHHHHHHHCCHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCHHHHHHHH
FGFSFFGTLSHGKTDAASLKPAKNFKPIEYPRPDGVLSFDKLTNVSFTNTYHEEDQPVHL
HHHHHHEECCCCCCCCCCCCCCCCCCCCCCCCCCCCEEHHHHCCCEEECCCCCCCCCEEE
KVKDLALQKSSEYDVYAGPSARYCPAGVYEWVKDEGGAMRFQINSQNCIHCKTCDIKDPN
EEEHHHHCCCCCCEEEECCCCCCCCHHHHHHHHCCCCEEEEEECCCCEEEEEECCCCCCC
LNINWTVPEGGGGPAYSNT
EEEEEECCCCCCCCCCCCC
>Mature Secondary Structure 
AETPERESMEFDLVIVGGGPAGLSAAIRFKQLANEAGEDLSVVVIEKGGEIGAHILSGV
CCCCCCCCEEEEEEEECCCCHHHHHHHHHHHHHHHCCCCEEEEEEECCCCHHHHHHHHH
VMDPVGLDQLIPDWRTRDDRPLKTEVDDDKFIFLGPSGAADISWLPMPPFMKNHGNFTGS
HCCCCCHHHHCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCEECCCCCHHHCCCCCCCH
LANVTRWLGAEAEKLGVEVFPGFAASELVYDDKGAVKGIVAGVMGIGADGQPKDDYQPGM
HHHHHHHHCCCHHHCCEEECCCCCHHHEEECCCCHHHHHHHHHHHCCCCCCCCCCCHHHH
ELLGKYVLFAEGARGSLTKQLINKFNLDEGRDPQKYGIGLKEVWSVPEENFKEGYVQHTM
HHHHCEEEEECCCCCHHHHHHHHHCCCCCCCCHHHHCCCHHHHHCCCHHHHHHHHHHHHC
GWPLDNKTGGGSFLYHFRDNGEPFITVGFVVHLNYANPYISPYDEFQRFKHHDAVSPFLK
CCCCCCCCCCCEEEEEEECCCCCEEEEEEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHH
GGKRVAYGARAITEGGFQSVPKLAFPGGALIGCGAGFVNVPRIKGSHNAILTGMMGAEAA
CCCEEEECCHHHCCCCHHCCCCCCCCCCCEEECCCCCEECCCCCCCCCEEEEECHHHHHH
FEAIREGRSGDTLDHYEEAYAGSSVYKELKTVRNVKPLWSKLGTALGIPMGGLDMWTNTL
HHHHHCCCCCCCHHHHHHHHCCHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCHHHHHHHH
FGFSFFGTLSHGKTDAASLKPAKNFKPIEYPRPDGVLSFDKLTNVSFTNTYHEEDQPVHL
HHHHHHEECCCCCCCCCCCCCCCCCCCCCCCCCCCCEEHHHHCCCEEECCCCCCCCCEEE
KVKDLALQKSSEYDVYAGPSARYCPAGVYEWVKDEGGAMRFQINSQNCIHCKTCDIKDPN
EEEHHHHCCCCCCEEEECCCCCCCCHHHHHHHHCCCCEEEEEECCCCEEEEEECCCCCCC
LNINWTVPEGGGGPAYSNT
EEEEEECCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 10984043 [H]