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The map label for this gene is gidA

Identifier: 114797761

GI number: 114797761

Start: 3697656

End: 3699521

Strand: Reverse

Name: gidA

Synonym: HNE_3563

Alternate gene names: 114797761

Gene position: 3699521-3697656 (Counterclockwise)

Preceding gene: 114799625

Following gene: 114798745

Centisome position: 99.85

GC content: 60.72

Gene sequence:

>1866_bases
ATGCCGGACTTCCCGGATTTCGACGTAATAGTCATTGGCGGTGGCCATGCAGGTTGCGAGGCTGCGGCGGCCTCTGCCCG
CTTTGGCGCGCGCACGGCGCTCATCACCCATAAGCGGTCGACCATTGGCGAGATGAGTTGCAACCCTGCAATCGGCGGTC
TCGGCAAAGGCCACCTCGTCCGCGAGATTGATGCGCTGGATGGCGTCATGGGACGGCTCGCTGACAAGGCCGGTATCCAG
TTCCGGATGTTGAACCGCTCCAAAGGCCCAGCCGTCTGGGGGCCGCGTTCCCAGATCGACCGGAAGCTTTACCGCGAAGC
CATGCAGTCCGAACTCGCGGACTATCCAAACCTCACGATCATAGAAGATGGCGCCGAAGACCTGATTGTCGAGGATGGCT
TGATCCGGGGTGTCGTCGGCCTGACCGGCCAACGTTATGGCGCGTCAAAGGTCGTCATTACGACCGGCACATTTTTAAAG
GGCGAAATCCATATCGGCGCCAAACGCATTCCGGCAGGCCGGATTGGCGAGGCACCTGCGCTCGGCCTGTCGGACCGGCT
GTATTCGATCGGCCTTCCGATGGGCCGGCTCAAGACTGGCACGCCCGCCCGCCTTGATGGCCGAACCATCCATTGGGACC
GGTTGGAGATGCAGCCGGCCGATGAACAGCCAATCCCGTTCTCTTTCCTCAATTCGGAAATCACAGTGCGGCAGGTTCAG
TGCGGCATCACGTGGACGACGCCTGAAACCCACGCGATCATCGAAGCGCATATGAATGAGTCGGCGGTCTATTCCGGCGC
GATCTCCGGACGCGGACCGCGCTATTGTCCGTCCATCGAGGATAAGGTGAATCGGTTCGGCGACCGGGACCGGCATCAGG
TCTTTCTGGAGCCCGAAGGGCTCGACGATCATACGGTCTATCCAAACGGCATCTCGACCTCGCTTCCCGAAGAGGTCCAG
GAGAAGTTCATCCGGACCATTCCCGGTCTGGAAGACGCTGTCATCCTCCAGCACGCCTATGCGATCGAGTATGACTATGT
GGATCCGCGCGCGCTCAGCCCGGCTCTGGAAGTCAAACTCATGCCCGGCCTTTATCTTGCCGGACAGATCAATGGCACGA
CGGGATATGAGGAAGCTGGCGCCCAGGGTCTCATGGCGGGTCTCAACGCTGCCCGCGCCGCGTCCGGAAAAGATCCCGTC
ATTTTCGATCGCGCTGAAGCCTATATCGGGGTCCTGATCGACGATCTTGTCACGCGCGGCGTGACGGAGCCGTATCGGAT
GTTCACCTCGCGGGCCGAATACAGGCTCGCCTTGCGGGCAGACAATGCCGACCAGCGGCTCACTCAGCGCGGGATTGATG
CGGGCGTGGTGTGTGAAACACGCGCCGCAATGTTTCACGTGAAACATCGCGCGCTGGAATCGGCCCGAAATCTTCTCAAA
ACGCTGAATCTCAGTCCGGCCGCCGCCGTCCGGAATGGATGGGCGGTCAACCAGGACGGCCGCATTCGATCAGCTTGGGA
GTATCTCTCCTACAAAGAGATCTGTTTCGATCATCTCGCCCAGGTCTGGCCGGAGCTGTCGGCTATCCCGGCGGAGATTG
TCGCGCAAATCGAAATCGAAGCACTCTATTCGGCGTATCTGGATCGGCAGGCCGAAGACGTCGCTGCGCTCCGCCGTGAT
GAGGCGCTGAGTATTCCCTCGGATCTCGACTATGATCTGATTGGCGGCCTTTCAAACGAGGTTCGCCAGAAACTGAAATC
GGTCAGACCAGGCACGCTGGGTCAGGCCGGGCGGATCGAAGGCGTTACACCGGGCGCACTGACGGCGCTACTCGGTCATG
TCCGCCGCGTCCGGAAAGCTGGGTGA

Upstream 100 bases:

>100_bases
GGCGCGGTCTTTTCCAAATTCTGCATCGGAAAATGACCCCTAGGGTTTGAAGGCCTCCGGCGTTATATACCCGCCTCAAG
CAGCGCTTAAGGGTTGGTTA

Downstream 100 bases:

>100_bases
CATATGAGTGAGCGAGACGACCGCGCGGCCTTTCTGGCCGCCAATGATGTTTCACGTGAAACATTGGACCGGCTGGATCG
GGTTATCGACACGCTCGATG

Product: tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA

Products: NA

Alternate protein names: Glucose-inhibited division protein A

Number of amino acids: Translated: 621; Mature: 620

Protein sequence:

>621_residues
MPDFPDFDVIVIGGGHAGCEAAAASARFGARTALITHKRSTIGEMSCNPAIGGLGKGHLVREIDALDGVMGRLADKAGIQ
FRMLNRSKGPAVWGPRSQIDRKLYREAMQSELADYPNLTIIEDGAEDLIVEDGLIRGVVGLTGQRYGASKVVITTGTFLK
GEIHIGAKRIPAGRIGEAPALGLSDRLYSIGLPMGRLKTGTPARLDGRTIHWDRLEMQPADEQPIPFSFLNSEITVRQVQ
CGITWTTPETHAIIEAHMNESAVYSGAISGRGPRYCPSIEDKVNRFGDRDRHQVFLEPEGLDDHTVYPNGISTSLPEEVQ
EKFIRTIPGLEDAVILQHAYAIEYDYVDPRALSPALEVKLMPGLYLAGQINGTTGYEEAGAQGLMAGLNAARAASGKDPV
IFDRAEAYIGVLIDDLVTRGVTEPYRMFTSRAEYRLALRADNADQRLTQRGIDAGVVCETRAAMFHVKHRALESARNLLK
TLNLSPAAAVRNGWAVNQDGRIRSAWEYLSYKEICFDHLAQVWPELSAIPAEIVAQIEIEALYSAYLDRQAEDVAALRRD
EALSIPSDLDYDLIGGLSNEVRQKLKSVRPGTLGQAGRIEGVTPGALTALLGHVRRVRKAG

Sequences:

>Translated_621_residues
MPDFPDFDVIVIGGGHAGCEAAAASARFGARTALITHKRSTIGEMSCNPAIGGLGKGHLVREIDALDGVMGRLADKAGIQ
FRMLNRSKGPAVWGPRSQIDRKLYREAMQSELADYPNLTIIEDGAEDLIVEDGLIRGVVGLTGQRYGASKVVITTGTFLK
GEIHIGAKRIPAGRIGEAPALGLSDRLYSIGLPMGRLKTGTPARLDGRTIHWDRLEMQPADEQPIPFSFLNSEITVRQVQ
CGITWTTPETHAIIEAHMNESAVYSGAISGRGPRYCPSIEDKVNRFGDRDRHQVFLEPEGLDDHTVYPNGISTSLPEEVQ
EKFIRTIPGLEDAVILQHAYAIEYDYVDPRALSPALEVKLMPGLYLAGQINGTTGYEEAGAQGLMAGLNAARAASGKDPV
IFDRAEAYIGVLIDDLVTRGVTEPYRMFTSRAEYRLALRADNADQRLTQRGIDAGVVCETRAAMFHVKHRALESARNLLK
TLNLSPAAAVRNGWAVNQDGRIRSAWEYLSYKEICFDHLAQVWPELSAIPAEIVAQIEIEALYSAYLDRQAEDVAALRRD
EALSIPSDLDYDLIGGLSNEVRQKLKSVRPGTLGQAGRIEGVTPGALTALLGHVRRVRKAG
>Mature_620_residues
PDFPDFDVIVIGGGHAGCEAAAASARFGARTALITHKRSTIGEMSCNPAIGGLGKGHLVREIDALDGVMGRLADKAGIQF
RMLNRSKGPAVWGPRSQIDRKLYREAMQSELADYPNLTIIEDGAEDLIVEDGLIRGVVGLTGQRYGASKVVITTGTFLKG
EIHIGAKRIPAGRIGEAPALGLSDRLYSIGLPMGRLKTGTPARLDGRTIHWDRLEMQPADEQPIPFSFLNSEITVRQVQC
GITWTTPETHAIIEAHMNESAVYSGAISGRGPRYCPSIEDKVNRFGDRDRHQVFLEPEGLDDHTVYPNGISTSLPEEVQE
KFIRTIPGLEDAVILQHAYAIEYDYVDPRALSPALEVKLMPGLYLAGQINGTTGYEEAGAQGLMAGLNAARAASGKDPVI
FDRAEAYIGVLIDDLVTRGVTEPYRMFTSRAEYRLALRADNADQRLTQRGIDAGVVCETRAAMFHVKHRALESARNLLKT
LNLSPAAAVRNGWAVNQDGRIRSAWEYLSYKEICFDHLAQVWPELSAIPAEIVAQIEIEALYSAYLDRQAEDVAALRRDE
ALSIPSDLDYDLIGGLSNEVRQKLKSVRPGTLGQAGRIEGVTPGALTALLGHVRRVRKAG

Specific function: NAD-binding protein involved in the addition of a carboxymethylaminomethyl (cmnm) group at the wobble position (U34) of certain tRNAs, forming tRNA-cmnm(5)s(2)U34

COG id: COG0445

COG function: function code D; NAD/FAD-utilizing enzyme apparently involved in cell division

Gene ontology:

Cell location: Cytoplasm

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the MnmG family

Homologues:

Organism=Homo sapiens, GI74024895, Length=645, Percent_Identity=47.4418604651163, Blast_Score=552, Evalue=1e-157,
Organism=Homo sapiens, GI19882217, Length=670, Percent_Identity=45.6716417910448, Blast_Score=538, Evalue=1e-153,
Organism=Homo sapiens, GI183227703, Length=685, Percent_Identity=44.6715328467153, Blast_Score=533, Evalue=1e-151,
Organism=Escherichia coli, GI2367273, Length=620, Percent_Identity=51.2903225806452, Blast_Score=599, Evalue=1e-172,
Organism=Caenorhabditis elegans, GI17534255, Length=623, Percent_Identity=43.1781701444623, Blast_Score=488, Evalue=1e-138,
Organism=Saccharomyces cerevisiae, GI6321202, Length=625, Percent_Identity=49.28, Blast_Score=600, Evalue=1e-172,
Organism=Drosophila melanogaster, GI24658174, Length=641, Percent_Identity=48.0499219968799, Blast_Score=543, Evalue=1e-154,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): MNMG_HYPNA (Q0BWA9)

Other databases:

- EMBL:   CP000158
- RefSeq:   YP_762234.1
- ProteinModelPortal:   Q0BWA9
- SMR:   Q0BWA9
- STRING:   Q0BWA9
- GeneID:   4288219
- GenomeReviews:   CP000158_GR
- KEGG:   hne:HNE_3563
- NMPDR:   fig|228405.5.peg.3412
- TIGR:   HNE_3563
- eggNOG:   COG0445
- HOGENOM:   HBG284774
- OMA:   GIQFRVL
- PhylomeDB:   Q0BWA9
- ProtClustDB:   PRK05192
- BioCyc:   HNEP81032:HNE_3563-MONOMER
- GO:   GO:0005737
- HAMAP:   MF_00129
- InterPro:   IPR004416
- InterPro:   IPR002218
- InterPro:   IPR020595
- TIGRFAMs:   TIGR00136

Pfam domain/function: PF01134 GIDA

EC number: NA

Molecular weight: Translated: 67665; Mature: 67534

Theoretical pI: Translated: 6.18; Mature: 6.18

Prosite motif: PS01280 GIDA_1; PS01281 GIDA_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPDFPDFDVIVIGGGHAGCEAAAASARFGARTALITHKRSTIGEMSCNPAIGGLGKGHLV
CCCCCCCCEEEEECCCCCHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCCCCCCCCCHHH
REIDALDGVMGRLADKAGIQFRMLNRSKGPAVWGPRSQIDRKLYREAMQSELADYPNLTI
HHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEE
IEDGAEDLIVEDGLIRGVVGLTGQRYGASKVVITTGTFLKGEIHIGAKRIPAGRIGEAPA
EECCCCHHHHCCCHHHHHHHCCCCCCCCCEEEEEECCEEEEEEEECCEECCCCCCCCCCC
LGLSDRLYSIGLPMGRLKTGTPARLDGRTIHWDRLEMQPADEQPIPFSFLNSEITVRQVQ
CCCCHHHHHCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCCCHHHHCCCEEEEEEE
CGITWTTPETHAIIEAHMNESAVYSGAISGRGPRYCPSIEDKVNRFGDRDRHQVFLEPEG
ECEEECCCCCCEEEEECCCCCCEEECCCCCCCCCCCCCHHHHHHHCCCCCCCEEEECCCC
LDDHTVYPNGISTSLPEEVQEKFIRTIPGLEDAVILQHAYAIEYDYVDPRALSPALEVKL
CCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHEEEEECCCCCHHCCCCCEEEE
MPGLYLAGQINGTTGYEEAGAQGLMAGLNAARAASGKDPVIFDRAEAYIGVLIDDLVTRG
CCCEEEEEEECCCCCCHHHCHHHHHHHHHHHHCCCCCCCEEEECHHHHHHHHHHHHHHHC
VTEPYRMFTSRAEYRLALRADNADQRLTQRGIDAGVVCETRAAMFHVKHRALESARNLLK
CCHHHHHHHCCCCEEEEEECCCHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHHHHHHHHH
TLNLSPAAAVRNGWAVNQDGRIRSAWEYLSYKEICFDHLAQVWPELSAIPAEIVAQIEIE
HCCCCHHHHHHCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH
ALYSAYLDRQAEDVAALRRDEALSIPSDLDYDLIGGLSNEVRQKLKSVRPGTLGQAGRIE
HHHHHHHCCHHHHHHHHHHCCCCCCCCCCCHHHHCCCHHHHHHHHHHCCCCCCCCCCCCC
GVTPGALTALLGHVRRVRKAG
CCCHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
PDFPDFDVIVIGGGHAGCEAAAASARFGARTALITHKRSTIGEMSCNPAIGGLGKGHLV
CCCCCCCEEEEECCCCCHHHHHHHHHCCCEEEEEEECCCCCCCCCCCCCCCCCCCCHHH
REIDALDGVMGRLADKAGIQFRMLNRSKGPAVWGPRSQIDRKLYREAMQSELADYPNLTI
HHHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEE
IEDGAEDLIVEDGLIRGVVGLTGQRYGASKVVITTGTFLKGEIHIGAKRIPAGRIGEAPA
EECCCCHHHHCCCHHHHHHHCCCCCCCCCEEEEEECCEEEEEEEECCEECCCCCCCCCCC
LGLSDRLYSIGLPMGRLKTGTPARLDGRTIHWDRLEMQPADEQPIPFSFLNSEITVRQVQ
CCCCHHHHHCCCCCCCCCCCCCCCCCCCEEEEEEEECCCCCCCCCCHHHHCCCEEEEEEE
CGITWTTPETHAIIEAHMNESAVYSGAISGRGPRYCPSIEDKVNRFGDRDRHQVFLEPEG
ECEEECCCCCCEEEEECCCCCCEEECCCCCCCCCCCCCHHHHHHHCCCCCCCEEEECCCC
LDDHTVYPNGISTSLPEEVQEKFIRTIPGLEDAVILQHAYAIEYDYVDPRALSPALEVKL
CCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCHHHHHHHHEEEEECCCCCHHCCCCCEEEE
MPGLYLAGQINGTTGYEEAGAQGLMAGLNAARAASGKDPVIFDRAEAYIGVLIDDLVTRG
CCCEEEEEEECCCCCCHHHCHHHHHHHHHHHHCCCCCCCEEEECHHHHHHHHHHHHHHHC
VTEPYRMFTSRAEYRLALRADNADQRLTQRGIDAGVVCETRAAMFHVKHRALESARNLLK
CCHHHHHHHCCCCEEEEEECCCHHHHHHHHCCCCCEEEHHHHHHHHHHHHHHHHHHHHHH
TLNLSPAAAVRNGWAVNQDGRIRSAWEYLSYKEICFDHLAQVWPELSAIPAEIVAQIEIE
HCCCCHHHHHHCCEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHH
ALYSAYLDRQAEDVAALRRDEALSIPSDLDYDLIGGLSNEVRQKLKSVRPGTLGQAGRIE
HHHHHHHCCHHHHHHHHHHCCCCCCCCCCCHHHHCCCHHHHHHHHHHCCCCCCCCCCCCC
GVTPGALTALLGHVRRVRKAG
CCCHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA