Click here to switch to the map view.

The map label for this gene is ytfH [C]

Identifier: 114797758

GI number: 114797758

Start: 2112217

End: 2112675

Strand: Reverse

Name: ytfH [C]

Synonym: HNE_2035

Alternate gene names: 114797758

Gene position: 2112675-2112217 (Counterclockwise)

Preceding gene: 114798791

Following gene: 114797381

Centisome position: 57.02

GC content: 56.86

Gene sequence:

>459_bases
TTGTTTCTTATAAGGAATTGGCCGAAACGGCAGGAATTCGCGCTTAAGGCGCCAAATACGCCCGCCCGGCTCGCGTTTCT
TTCTGGAACTTTCCGTAAGGTGCGGTACACTTGCGGAATGAAATGGTCAGAGCTGAACGATAACTGGTGCCCGGTTGCCC
GGACCCTTTCCGTCGTCGGGGACCGTTGGACATTGCTGATCCTGCGGGACTGCTACCTTGGCAAAACCAAATTCGAAGAG
TTCGCCCAGTCGGGCGGCATGACTCGGCACATTCTTGCGGACCGTCTAAAGCGCCTTGTCGAAGTCGGCATCCTGGAACG
CAACGCCTATTCCACAGCGCCGAAACGCTATGATTATGTGCTGACCGCGAAGGGCGAGGAACTCCGCCCAGCCCTCACCA
TCATGAAGGAATGGGGCAAGAAAAACCTGCCGATCCGGCGGGCGGCAATCGAGAGCTGA

Upstream 100 bases:

>100_bases
TTCCTGTTCGGCGTGGCGCGCGGGCTGCCGCTGGCCACCTGCGCCCGCCTCGGCCACATCGCAGCGGCTGAAGTGATCTC
GCATATCGGGCCCCGCCCGG

Downstream 100 bases:

>100_bases
GCCCGCCAGGCTACAGAATAAACTTCGACAGATCCGCATTCCCGGCCAGGCTACCAACTTTCTCGTCCACATAACTTGCC
GTGATCGTGAAGGTCTCGCC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 152; Mature: 152

Protein sequence:

>152_residues
MFLIRNWPKRQEFALKAPNTPARLAFLSGTFRKVRYTCGMKWSELNDNWCPVARTLSVVGDRWTLLILRDCYLGKTKFEE
FAQSGGMTRHILADRLKRLVEVGILERNAYSTAPKRYDYVLTAKGEELRPALTIMKEWGKKNLPIRRAAIES

Sequences:

>Translated_152_residues
MFLIRNWPKRQEFALKAPNTPARLAFLSGTFRKVRYTCGMKWSELNDNWCPVARTLSVVGDRWTLLILRDCYLGKTKFEE
FAQSGGMTRHILADRLKRLVEVGILERNAYSTAPKRYDYVLTAKGEELRPALTIMKEWGKKNLPIRRAAIES
>Mature_152_residues
MFLIRNWPKRQEFALKAPNTPARLAFLSGTFRKVRYTCGMKWSELNDNWCPVARTLSVVGDRWTLLILRDCYLGKTKFEE
FAQSGGMTRHILADRLKRLVEVGILERNAYSTAPKRYDYVLTAKGEELRPALTIMKEWGKKNLPIRRAAIES

Specific function: Unknown

COG id: COG1733

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH hxlR-type DNA-binding domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002577
- InterPro:   IPR011991 [H]

Pfam domain/function: PF01638 DUF24 [H]

EC number: NA

Molecular weight: Translated: 17638; Mature: 17638

Theoretical pI: Translated: 10.64; Mature: 10.64

Prosite motif: PS51118 HTH_HXLR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFLIRNWPKRQEFALKAPNTPARLAFLSGTFRKVRYTCGMKWSELNDNWCPVARTLSVVG
CCCCCCCCCCCCEEEECCCCCCEEHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHC
DRWTLLILRDCYLGKTKFEEFAQSGGMTRHILADRLKRLVEVGILERNAYSTAPKRYDYV
CCEEEEEEEHHHCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEE
LTAKGEELRPALTIMKEWGKKNLPIRRAAIES
EECCCCHHHHHHHHHHHCCCCCCCCHHHCCCC
>Mature Secondary Structure
MFLIRNWPKRQEFALKAPNTPARLAFLSGTFRKVRYTCGMKWSELNDNWCPVARTLSVVG
CCCCCCCCCCCCEEEECCCCCCEEHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHC
DRWTLLILRDCYLGKTKFEEFAQSGGMTRHILADRLKRLVEVGILERNAYSTAPKRYDYV
CCEEEEEEEHHHCCHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEE
LTAKGEELRPALTIMKEWGKKNLPIRRAAIES
EECCCCHHHHHHHHHHHCCCCCCCCHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]