| Definition | Hyphomonas neptunium ATCC 15444 chromosome, complete genome. |
|---|---|
| Accession | NC_008358 |
| Length | 3,705,021 |
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The map label for this gene is 114797741
Identifier: 114797741
GI number: 114797741
Start: 2833832
End: 2834839
Strand: Direct
Name: 114797741
Synonym: HNE_2673
Alternate gene names: NA
Gene position: 2833832-2834839 (Clockwise)
Preceding gene: 114800423
Following gene: 114798840
Centisome position: 76.49
GC content: 66.27
Gene sequence:
>1008_bases ATGAGCGGGGTTATCCCCGATTTCGAGATTGAGGCGCTGCTTCAGAGCGGCGCCATAAGGTGCGATGAGGCGCCCGAGCC TGGCCAGATCCAGCCGGCGAGCCTCGACCTGCGCCTGGCGGTCGATGCCTACCGCCTGCGCGCCAGCTTCCTGCCCGGCA AGGACCGCACGGTCGCCGAGATGTTGCAGGAGCCCGGCATCCATCTCCACCGGGTCGACCTGACCCAGGAAGGCGCAGTT TTAGAGACTGGCTGCGTCTATCTCGTGCCCTTGCAGGAATCCCTGCGCCTGCCCGCCGGCCTCTCGGCCCGCGCCAATCC CAAAAGCTCCACCGGCCGCATCGACGTGTTCACCCGCCTCGTCACCAATCGCAGCCGCGCCTTCGATGAAGTGCCCATGG GCTACTCCGGCCCGCTCTATCTTGAGGTTTCCCCGCGCACCTTCCCGATCAAGGTCCGCCCCGGCGACCGGCTCGCCCAG CTGCGCTTCAAGAAGAAGAAGCCCGAAACCCTGCGCGAGAAGGTCGTCTCGATTGACCTGGAGCCCCCCGCAGGCCAGCC CGCCGGCTACCGCGCCAAGGCCCATTCCGGCGTCGTCGATCTGCGCGGCCTCGGCGCCCATGAGGTCAGCCAGTTCTGGG AACCGGTCTATCCCAAGTCCGGCCGCATCGTGCTCAACCCCGAAGAGTTCTACATCCTGGTGAGCCGGGAGACCGTGAAG GTTGCCGCCAATGAGGCCGCCGAGATGGCCGCCATCGCGCCCGAGCTCGGCGAGTTCCGCGCCCATTATGCCGGCTTCTT CGATCCGGGCTTCGGGACCAACAAGGCGGGCAGCCGCGCCGTCCTCGAAGTGCGCTCACGCGACGTGCCGTTCATCCTCG AACACGGCCAGCCGGTCGCCAAGCTGATCTATGAGCCCATGACGGAAAAGCCCCGGCACCTCTACGGGGGCCAGGGCTCA AACTATCAGGGTCAGGGTCTGAAGCTCTCCAAACACTTCGCCGAGTGA
Upstream 100 bases:
>100_bases CTTCTTGTCGCCGCCGGGTGCATCCGCCATGGCTCTGATCCTTGTGTTTCCAGCAGCGGGTCTTATGCCTGAGACCCACA GGGTGCAAGTGATGGCTGAT
Downstream 100 bases:
>100_bases CCCCGGAACGCGGTTTCCCGCGTCCCGGTTTGTCCTGAAGTGTCCCGATTTGTCCAAGTTTGTCCAAAGGCTGCCGGGAT ATGTCCGGCAAATGTCGCCT
Product: 2'-deoxycytidine 5'-triphosphate deaminase
Products: dUTP; NH3
Alternate protein names: 2-Deoxycytidine 5-Triphosphate Deaminase; 2-Deoxycytidine 5'-Triphosphate Deaminase Superfamily; 2`-Deoxycytidine 5`-Triphosphate Deaminase Protein; Deoxycytidine Triphosphate Deaminase Protein; Deoxycytidine Triphosphate Deaminase
Number of amino acids: Translated: 335; Mature: 334
Protein sequence:
>335_residues MSGVIPDFEIEALLQSGAIRCDEAPEPGQIQPASLDLRLAVDAYRLRASFLPGKDRTVAEMLQEPGIHLHRVDLTQEGAV LETGCVYLVPLQESLRLPAGLSARANPKSSTGRIDVFTRLVTNRSRAFDEVPMGYSGPLYLEVSPRTFPIKVRPGDRLAQ LRFKKKKPETLREKVVSIDLEPPAGQPAGYRAKAHSGVVDLRGLGAHEVSQFWEPVYPKSGRIVLNPEEFYILVSRETVK VAANEAAEMAAIAPELGEFRAHYAGFFDPGFGTNKAGSRAVLEVRSRDVPFILEHGQPVAKLIYEPMTEKPRHLYGGQGS NYQGQGLKLSKHFAE
Sequences:
>Translated_335_residues MSGVIPDFEIEALLQSGAIRCDEAPEPGQIQPASLDLRLAVDAYRLRASFLPGKDRTVAEMLQEPGIHLHRVDLTQEGAV LETGCVYLVPLQESLRLPAGLSARANPKSSTGRIDVFTRLVTNRSRAFDEVPMGYSGPLYLEVSPRTFPIKVRPGDRLAQ LRFKKKKPETLREKVVSIDLEPPAGQPAGYRAKAHSGVVDLRGLGAHEVSQFWEPVYPKSGRIVLNPEEFYILVSRETVK VAANEAAEMAAIAPELGEFRAHYAGFFDPGFGTNKAGSRAVLEVRSRDVPFILEHGQPVAKLIYEPMTEKPRHLYGGQGS NYQGQGLKLSKHFAE >Mature_334_residues SGVIPDFEIEALLQSGAIRCDEAPEPGQIQPASLDLRLAVDAYRLRASFLPGKDRTVAEMLQEPGIHLHRVDLTQEGAVL ETGCVYLVPLQESLRLPAGLSARANPKSSTGRIDVFTRLVTNRSRAFDEVPMGYSGPLYLEVSPRTFPIKVRPGDRLAQL RFKKKKPETLREKVVSIDLEPPAGQPAGYRAKAHSGVVDLRGLGAHEVSQFWEPVYPKSGRIVLNPEEFYILVSRETVKV AANEAAEMAAIAPELGEFRAHYAGFFDPGFGTNKAGSRAVLEVRSRDVPFILEHGQPVAKLIYEPMTEKPRHLYGGQGSN YQGQGLKLSKHFAE
Specific function: Unknown
COG id: COG0717
COG function: function code F; Deoxycytidine deaminase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: 3.5.4.13
Molecular weight: Translated: 36894; Mature: 36762
Theoretical pI: Translated: 8.21; Mature: 8.21
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSGVIPDFEIEALLQSGAIRCDEAPEPGQIQPASLDLRLAVDAYRLRASFLPGKDRTVAE CCCCCCCHHHHHHHHCCCEECCCCCCCCCCCCCCEEEEEEEEHEEHHHHCCCCCCCHHHH MLQEPGIHLHRVDLTQEGAVLETGCVYLVPLQESLRLPAGLSARANPKSSTGRIDVFTRL HHHCCCCEEEEEECCCCCCEEECCCEEEEECHHHCCCCCCCCCCCCCCCCCCHHHHHHHH VTNRSRAFDEVPMGYSGPLYLEVSPRTFPIKVRPGDRLAQLRFKKKKPETLREKVVSIDL HHHHHHHHHCCCCCCCCCEEEEECCCEEEEEECCCCHHHHHHHCCCCCHHHHHHEEEEEC EPPAGQPAGYRAKAHSGVVDLRGLGAHEVSQFWEPVYPKSGRIVLNPEEFYILVSRETVK CCCCCCCCCCEECCCCCEEEECCCCHHHHHHHHCCCCCCCCEEEECCCEEEEEEECCEEE VAANEAAEMAAIAPELGEFRAHYAGFFDPGFGTNKAGSRAVLEVRSRDVPFILEHGQPVA EEHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEECCCCCCEEEECCCHHH KLIYEPMTEKPRHLYGGQGSNYQGQGLKLSKHFAE HHHHCCCCCCCCCCCCCCCCCCCCCCEEEHHHHCC >Mature Secondary Structure SGVIPDFEIEALLQSGAIRCDEAPEPGQIQPASLDLRLAVDAYRLRASFLPGKDRTVAE CCCCCCHHHHHHHHCCCEECCCCCCCCCCCCCCEEEEEEEEHEEHHHHCCCCCCCHHHH MLQEPGIHLHRVDLTQEGAVLETGCVYLVPLQESLRLPAGLSARANPKSSTGRIDVFTRL HHHCCCCEEEEEECCCCCCEEECCCEEEEECHHHCCCCCCCCCCCCCCCCCCHHHHHHHH VTNRSRAFDEVPMGYSGPLYLEVSPRTFPIKVRPGDRLAQLRFKKKKPETLREKVVSIDL HHHHHHHHHCCCCCCCCCEEEEECCCEEEEEECCCCHHHHHHHCCCCCHHHHHHEEEEEC EPPAGQPAGYRAKAHSGVVDLRGLGAHEVSQFWEPVYPKSGRIVLNPEEFYILVSRETVK CCCCCCCCCCEECCCCCEEEECCCCHHHHHHHHCCCCCCCCEEEECCCEEEEEEECCEEE VAANEAAEMAAIAPELGEFRAHYAGFFDPGFGTNKAGSRAVLEVRSRDVPFILEHGQPVA EEHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEECCCCCCEEEECCCHHH KLIYEPMTEKPRHLYGGQGSNYQGQGLKLSKHFAE HHHHCCCCCCCCCCCCCCCCCCCCCCEEEHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: dCTP; H2O
Specific reaction: dCTP + H2O = dUTP + NH3
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA