Definition Hyphomonas neptunium ATCC 15444 chromosome, complete genome.
Accession NC_008358
Length 3,705,021

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The map label for this gene is 114797741

Identifier: 114797741

GI number: 114797741

Start: 2833832

End: 2834839

Strand: Direct

Name: 114797741

Synonym: HNE_2673

Alternate gene names: NA

Gene position: 2833832-2834839 (Clockwise)

Preceding gene: 114800423

Following gene: 114798840

Centisome position: 76.49

GC content: 66.27

Gene sequence:

>1008_bases
ATGAGCGGGGTTATCCCCGATTTCGAGATTGAGGCGCTGCTTCAGAGCGGCGCCATAAGGTGCGATGAGGCGCCCGAGCC
TGGCCAGATCCAGCCGGCGAGCCTCGACCTGCGCCTGGCGGTCGATGCCTACCGCCTGCGCGCCAGCTTCCTGCCCGGCA
AGGACCGCACGGTCGCCGAGATGTTGCAGGAGCCCGGCATCCATCTCCACCGGGTCGACCTGACCCAGGAAGGCGCAGTT
TTAGAGACTGGCTGCGTCTATCTCGTGCCCTTGCAGGAATCCCTGCGCCTGCCCGCCGGCCTCTCGGCCCGCGCCAATCC
CAAAAGCTCCACCGGCCGCATCGACGTGTTCACCCGCCTCGTCACCAATCGCAGCCGCGCCTTCGATGAAGTGCCCATGG
GCTACTCCGGCCCGCTCTATCTTGAGGTTTCCCCGCGCACCTTCCCGATCAAGGTCCGCCCCGGCGACCGGCTCGCCCAG
CTGCGCTTCAAGAAGAAGAAGCCCGAAACCCTGCGCGAGAAGGTCGTCTCGATTGACCTGGAGCCCCCCGCAGGCCAGCC
CGCCGGCTACCGCGCCAAGGCCCATTCCGGCGTCGTCGATCTGCGCGGCCTCGGCGCCCATGAGGTCAGCCAGTTCTGGG
AACCGGTCTATCCCAAGTCCGGCCGCATCGTGCTCAACCCCGAAGAGTTCTACATCCTGGTGAGCCGGGAGACCGTGAAG
GTTGCCGCCAATGAGGCCGCCGAGATGGCCGCCATCGCGCCCGAGCTCGGCGAGTTCCGCGCCCATTATGCCGGCTTCTT
CGATCCGGGCTTCGGGACCAACAAGGCGGGCAGCCGCGCCGTCCTCGAAGTGCGCTCACGCGACGTGCCGTTCATCCTCG
AACACGGCCAGCCGGTCGCCAAGCTGATCTATGAGCCCATGACGGAAAAGCCCCGGCACCTCTACGGGGGCCAGGGCTCA
AACTATCAGGGTCAGGGTCTGAAGCTCTCCAAACACTTCGCCGAGTGA

Upstream 100 bases:

>100_bases
CTTCTTGTCGCCGCCGGGTGCATCCGCCATGGCTCTGATCCTTGTGTTTCCAGCAGCGGGTCTTATGCCTGAGACCCACA
GGGTGCAAGTGATGGCTGAT

Downstream 100 bases:

>100_bases
CCCCGGAACGCGGTTTCCCGCGTCCCGGTTTGTCCTGAAGTGTCCCGATTTGTCCAAGTTTGTCCAAAGGCTGCCGGGAT
ATGTCCGGCAAATGTCGCCT

Product: 2'-deoxycytidine 5'-triphosphate deaminase

Products: dUTP; NH3

Alternate protein names: 2-Deoxycytidine 5-Triphosphate Deaminase; 2-Deoxycytidine 5'-Triphosphate Deaminase Superfamily; 2`-Deoxycytidine 5`-Triphosphate Deaminase Protein; Deoxycytidine Triphosphate Deaminase Protein; Deoxycytidine Triphosphate Deaminase

Number of amino acids: Translated: 335; Mature: 334

Protein sequence:

>335_residues
MSGVIPDFEIEALLQSGAIRCDEAPEPGQIQPASLDLRLAVDAYRLRASFLPGKDRTVAEMLQEPGIHLHRVDLTQEGAV
LETGCVYLVPLQESLRLPAGLSARANPKSSTGRIDVFTRLVTNRSRAFDEVPMGYSGPLYLEVSPRTFPIKVRPGDRLAQ
LRFKKKKPETLREKVVSIDLEPPAGQPAGYRAKAHSGVVDLRGLGAHEVSQFWEPVYPKSGRIVLNPEEFYILVSRETVK
VAANEAAEMAAIAPELGEFRAHYAGFFDPGFGTNKAGSRAVLEVRSRDVPFILEHGQPVAKLIYEPMTEKPRHLYGGQGS
NYQGQGLKLSKHFAE

Sequences:

>Translated_335_residues
MSGVIPDFEIEALLQSGAIRCDEAPEPGQIQPASLDLRLAVDAYRLRASFLPGKDRTVAEMLQEPGIHLHRVDLTQEGAV
LETGCVYLVPLQESLRLPAGLSARANPKSSTGRIDVFTRLVTNRSRAFDEVPMGYSGPLYLEVSPRTFPIKVRPGDRLAQ
LRFKKKKPETLREKVVSIDLEPPAGQPAGYRAKAHSGVVDLRGLGAHEVSQFWEPVYPKSGRIVLNPEEFYILVSRETVK
VAANEAAEMAAIAPELGEFRAHYAGFFDPGFGTNKAGSRAVLEVRSRDVPFILEHGQPVAKLIYEPMTEKPRHLYGGQGS
NYQGQGLKLSKHFAE
>Mature_334_residues
SGVIPDFEIEALLQSGAIRCDEAPEPGQIQPASLDLRLAVDAYRLRASFLPGKDRTVAEMLQEPGIHLHRVDLTQEGAVL
ETGCVYLVPLQESLRLPAGLSARANPKSSTGRIDVFTRLVTNRSRAFDEVPMGYSGPLYLEVSPRTFPIKVRPGDRLAQL
RFKKKKPETLREKVVSIDLEPPAGQPAGYRAKAHSGVVDLRGLGAHEVSQFWEPVYPKSGRIVLNPEEFYILVSRETVKV
AANEAAEMAAIAPELGEFRAHYAGFFDPGFGTNKAGSRAVLEVRSRDVPFILEHGQPVAKLIYEPMTEKPRHLYGGQGSN
YQGQGLKLSKHFAE

Specific function: Unknown

COG id: COG0717

COG function: function code F; Deoxycytidine deaminase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 3.5.4.13

Molecular weight: Translated: 36894; Mature: 36762

Theoretical pI: Translated: 8.21; Mature: 8.21

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSGVIPDFEIEALLQSGAIRCDEAPEPGQIQPASLDLRLAVDAYRLRASFLPGKDRTVAE
CCCCCCCHHHHHHHHCCCEECCCCCCCCCCCCCCEEEEEEEEHEEHHHHCCCCCCCHHHH
MLQEPGIHLHRVDLTQEGAVLETGCVYLVPLQESLRLPAGLSARANPKSSTGRIDVFTRL
HHHCCCCEEEEEECCCCCCEEECCCEEEEECHHHCCCCCCCCCCCCCCCCCCHHHHHHHH
VTNRSRAFDEVPMGYSGPLYLEVSPRTFPIKVRPGDRLAQLRFKKKKPETLREKVVSIDL
HHHHHHHHHCCCCCCCCCEEEEECCCEEEEEECCCCHHHHHHHCCCCCHHHHHHEEEEEC
EPPAGQPAGYRAKAHSGVVDLRGLGAHEVSQFWEPVYPKSGRIVLNPEEFYILVSRETVK
CCCCCCCCCCEECCCCCEEEECCCCHHHHHHHHCCCCCCCCEEEECCCEEEEEEECCEEE
VAANEAAEMAAIAPELGEFRAHYAGFFDPGFGTNKAGSRAVLEVRSRDVPFILEHGQPVA
EEHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEECCCCCCEEEECCCHHH
KLIYEPMTEKPRHLYGGQGSNYQGQGLKLSKHFAE
HHHHCCCCCCCCCCCCCCCCCCCCCCEEEHHHHCC
>Mature Secondary Structure 
SGVIPDFEIEALLQSGAIRCDEAPEPGQIQPASLDLRLAVDAYRLRASFLPGKDRTVAE
CCCCCCHHHHHHHHCCCEECCCCCCCCCCCCCCEEEEEEEEHEEHHHHCCCCCCCHHHH
MLQEPGIHLHRVDLTQEGAVLETGCVYLVPLQESLRLPAGLSARANPKSSTGRIDVFTRL
HHHCCCCEEEEEECCCCCCEEECCCEEEEECHHHCCCCCCCCCCCCCCCCCCHHHHHHHH
VTNRSRAFDEVPMGYSGPLYLEVSPRTFPIKVRPGDRLAQLRFKKKKPETLREKVVSIDL
HHHHHHHHHCCCCCCCCCEEEEECCCEEEEEECCCCHHHHHHHCCCCCHHHHHHEEEEEC
EPPAGQPAGYRAKAHSGVVDLRGLGAHEVSQFWEPVYPKSGRIVLNPEEFYILVSRETVK
CCCCCCCCCCEECCCCCEEEECCCCHHHHHHHHCCCCCCCCEEEECCCEEEEEEECCEEE
VAANEAAEMAAIAPELGEFRAHYAGFFDPGFGTNKAGSRAVLEVRSRDVPFILEHGQPVA
EEHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEEEECCCCCCEEEECCCHHH
KLIYEPMTEKPRHLYGGQGSNYQGQGLKLSKHFAE
HHHHCCCCCCCCCCCCCCCCCCCCCCEEEHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: dCTP; H2O

Specific reaction: dCTP + H2O = dUTP + NH3

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA