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The map label for this gene is nagD [H]

Identifier: 114797738

GI number: 114797738

Start: 2578838

End: 2579623

Strand: Direct

Name: nagD [H]

Synonym: HNE_2457

Alternate gene names: 114797738

Gene position: 2578838-2579623 (Clockwise)

Preceding gene: 114799158

Following gene: 114798712

Centisome position: 69.6

GC content: 58.14

Gene sequence:

>786_bases
ATGAAGAATGTGATCCCGCTTGAAGGCACCCGAATTCGCGAGTCAGTATCCATCATCAGATCGGCCGGCGGCTTTATCGT
CGACTGGGATGGATGCTGCGCCATAGACAATGTTCTTGTTCCGGAAGCGGCGGAGTTCCTTCGCGCTGTTCAACCGAGGC
TCGTCATACTCTCCAATAATTCCACGAACACTATGGAGGATATTCACGCGATTCTGAAACAGTCAGGCATCGCTCTCAAG
CCCGACCGTGTCCTGCTTGCCGGCGTCTCCGCCATTCGGCATGCAGCAGCAAAGGGATGGAAGCGCGCCATGATACTTGG
CAGTCCTGCAATGAAGGCCTATGCGTTGCGATGCGGTCTGGAAGTGGTTCGGGAAGAGGCGCAGGTTGTTATCGTCATGC
GCGACACACGCCTTACCTACGCCGCGCTGGAGCGGGCCGCCAATTGCCTTGCCGGTGGCGCGAGCGTCATCCTCGCCAAT
CCCGATGGTTCGCATCGCGGCGCAAATGCCCGTATACGGCCGGAAACCGGCGCGATCTTCGCCGCACTGAGCGCAGCCGT
CGATCTGTCAGAAACTTCAGTTGAAACAATCGGCAAGCCATCTCCTGCCCTGTTTACGGAAGCCTGCCGAATCCTGGGCA
CCCAACCTGCCAGGACAATCATGCTGGGGGACAATCCCGCAACGGATATTGATGGCGCGCGCAAGCTTGGCATGCCGGCA
TTACTGGTGACGCCGTCGCCGGCAGCCTTCTTCCAATCGCTCTTGGAAACCCTTAGAAACGCTTGA

Upstream 100 bases:

>100_bases
TTGTGACGCCGCAGTGAAGCTTCTGTAATCCTAATATAAATTTTTCTCATTTTGAATTTTCTGTATTTTGAAGATTATTC
AATTCGTTTAAAGCGGCCGC

Downstream 100 bases:

>100_bases
TCGAGAGTACGTCAAACGTTTCGCGAAGCGTTTCCGTGGCGCGGTCGTAGTCAGCCATTGCGAGAGCGGCAATCAGCGTA
TCTATCACGCACAGCTGTGC

Product: HAD superfamily hydrolase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 261; Mature: 261

Protein sequence:

>261_residues
MKNVIPLEGTRIRESVSIIRSAGGFIVDWDGCCAIDNVLVPEAAEFLRAVQPRLVILSNNSTNTMEDIHAILKQSGIALK
PDRVLLAGVSAIRHAAAKGWKRAMILGSPAMKAYALRCGLEVVREEAQVVIVMRDTRLTYAALERAANCLAGGASVILAN
PDGSHRGANARIRPETGAIFAALSAAVDLSETSVETIGKPSPALFTEACRILGTQPARTIMLGDNPATDIDGARKLGMPA
LLVTPSPAAFFQSLLETLRNA

Sequences:

>Translated_261_residues
MKNVIPLEGTRIRESVSIIRSAGGFIVDWDGCCAIDNVLVPEAAEFLRAVQPRLVILSNNSTNTMEDIHAILKQSGIALK
PDRVLLAGVSAIRHAAAKGWKRAMILGSPAMKAYALRCGLEVVREEAQVVIVMRDTRLTYAALERAANCLAGGASVILAN
PDGSHRGANARIRPETGAIFAALSAAVDLSETSVETIGKPSPALFTEACRILGTQPARTIMLGDNPATDIDGARKLGMPA
LLVTPSPAAFFQSLLETLRNA
>Mature_261_residues
MKNVIPLEGTRIRESVSIIRSAGGFIVDWDGCCAIDNVLVPEAAEFLRAVQPRLVILSNNSTNTMEDIHAILKQSGIALK
PDRVLLAGVSAIRHAAAKGWKRAMILGSPAMKAYALRCGLEVVREEAQVVIVMRDTRLTYAALERAANCLAGGASVILAN
PDGSHRGANARIRPETGAIFAALSAAVDLSETSVETIGKPSPALFTEACRILGTQPARTIMLGDNPATDIDGARKLGMPA
LLVTPSPAAFFQSLLETLRNA

Specific function: Unknown

COG id: COG0647

COG function: function code G; Predicted sugar phosphatases of the HAD superfamily

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1786890, Length=225, Percent_Identity=29.3333333333333, Blast_Score=85, Evalue=6e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005834
- InterPro:   IPR023214
- InterPro:   IPR006357
- InterPro:   IPR023215 [H]

Pfam domain/function: PF00702 Hydrolase [H]

EC number: NA

Molecular weight: Translated: 27648; Mature: 27648

Theoretical pI: Translated: 8.50; Mature: 8.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKNVIPLEGTRIRESVSIIRSAGGFIVDWDGCCAIDNVLVPEAAEFLRAVQPRLVILSNN
CCCCCCCCCCHHHHHHHHHHHCCCEEEECCCCHHHCCCCCHHHHHHHHHCCCEEEEEECC
STNTMEDIHAILKQSGIALKPDRVLLAGVSAIRHAAAKGWKRAMILGSPAMKAYALRCGL
CCCHHHHHHHHHHHCCCEECCCHHHHHHHHHHHHHHHHCHHEEEEECCCHHHHHHHHHHH
EVVREEAQVVIVMRDTRLTYAALERAANCLAGGASVILANPDGSHRGANARIRPETGAIF
HHHHCCCEEEEEEECCCHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCEECCCCCHHH
AALSAAVDLSETSVETIGKPSPALFTEACRILGTQPARTIMLGDNPATDIDGARKLGMPA
HHHHHHHCCCHHHHHHCCCCCHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCHHHHCCCE
LLVTPSPAAFFQSLLETLRNA
EEECCCHHHHHHHHHHHHHCC
>Mature Secondary Structure
MKNVIPLEGTRIRESVSIIRSAGGFIVDWDGCCAIDNVLVPEAAEFLRAVQPRLVILSNN
CCCCCCCCCCHHHHHHHHHHHCCCEEEECCCCHHHCCCCCHHHHHHHHHCCCEEEEEECC
STNTMEDIHAILKQSGIALKPDRVLLAGVSAIRHAAAKGWKRAMILGSPAMKAYALRCGL
CCCHHHHHHHHHHHCCCEECCCHHHHHHHHHHHHHHHHCHHEEEEECCCHHHHHHHHHHH
EVVREEAQVVIVMRDTRLTYAALERAANCLAGGASVILANPDGSHRGANARIRPETGAIF
HHHHCCCEEEEEEECCCHHHHHHHHHHHHHCCCCEEEEECCCCCCCCCCCEECCCCCHHH
AALSAAVDLSETSVETIGKPSPALFTEACRILGTQPARTIMLGDNPATDIDGARKLGMPA
HHHHHHHCCCHHHHHHCCCCCHHHHHHHHHHHCCCCCCEEEECCCCCCCCCCHHHHCCCE
LLVTPSPAAFFQSLLETLRNA
EEECCCHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]