| Definition | Hyphomonas neptunium ATCC 15444 chromosome, complete genome. |
|---|---|
| Accession | NC_008358 |
| Length | 3,705,021 |
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The map label for this gene is acrR [C]
Identifier: 114797696
GI number: 114797696
Start: 16377
End: 17000
Strand: Reverse
Name: acrR [C]
Synonym: HNE_0025
Alternate gene names: 114797696
Gene position: 17000-16377 (Counterclockwise)
Preceding gene: 114800461
Following gene: 114799580
Centisome position: 0.46
GC content: 64.42
Gene sequence:
>624_bases ATGGCCCGCACGGCAAATCCCCATACGCGTGACAACCTCATGGAGGCGGCTTTCAAGCTGGTGCGCGAGAAGGGCCTCAC CGCGACGACGGTGGATGAAATCTGCGCGGCGGCGGGGGTTTCCAAGGGTGCGTTCTTTCATCACTTCAAGAGCAAGGAAG AATTGGCGGTGGCGGCGGCCCATCACTGGTCTGCGGTGACGGGCGGTTTTTTTGATAACGCGCCGTATCACCAGCCCGAG GACCCGCTGGAGCGCCTGCTTGGCTATATCGCCCTGCGCCGCGAGATGATGGACGGGGAGATCGCCGATTTTACCTGCTT TGTGGGCACGATGGCGCAGGAGGCCTGGGCGACGAGCCCGCCTGTGGCGGCGGCGGCCTGGGACAGCATGGCAGAGCATG CCGAAAAGCTGGCGGTGGATATTGATGCGGCGAAGGCCGCGCGCGGCATTGCCGGCGACTGGAGCGCGCGCAGCCTGGCG CTGCACATTGGGACGGTGACGCAGGGCGCGTTCATTCTGGCCAAGGCGAGCGGCGATGCTTCGATTGCGCAAGACAGCCT CGATCATCTGCGCCGCTACATCGAGGCCCTGTTTGAGGCCCCCGCCCCTGCTGCGAAATCATAA
Upstream 100 bases:
>100_bases GCAAAAACTCCAACCGGGCTCCAAAAAGCAGATCTGCCAAAAACAGGCTTTACATTTATACCGACTGGTTGGTATTAAAC ACCTCAAGGAGCACATACCC
Downstream 100 bases:
>100_bases AGAGAGGAAACATCATGCCATCCACCATCCATCTGCACCGCGTGCTGACGACCAATCCCCAGAAAGTCTACCGCGCGTTT ATCGAGCCTGATGCGATTGC
Product: TetR family transcriptional regulator
Products: NA
Alternate protein names: Transcriptional Regulator TetR Family; Transcriptional Regulator Protein; Transcriptional Regulator
Number of amino acids: Translated: 207; Mature: 206
Protein sequence:
>207_residues MARTANPHTRDNLMEAAFKLVREKGLTATTVDEICAAAGVSKGAFFHHFKSKEELAVAAAHHWSAVTGGFFDNAPYHQPE DPLERLLGYIALRREMMDGEIADFTCFVGTMAQEAWATSPPVAAAAWDSMAEHAEKLAVDIDAAKAARGIAGDWSARSLA LHIGTVTQGAFILAKASGDASIAQDSLDHLRRYIEALFEAPAPAAKS
Sequences:
>Translated_207_residues MARTANPHTRDNLMEAAFKLVREKGLTATTVDEICAAAGVSKGAFFHHFKSKEELAVAAAHHWSAVTGGFFDNAPYHQPE DPLERLLGYIALRREMMDGEIADFTCFVGTMAQEAWATSPPVAAAAWDSMAEHAEKLAVDIDAAKAARGIAGDWSARSLA LHIGTVTQGAFILAKASGDASIAQDSLDHLRRYIEALFEAPAPAAKS >Mature_206_residues ARTANPHTRDNLMEAAFKLVREKGLTATTVDEICAAAGVSKGAFFHHFKSKEELAVAAAHHWSAVTGGFFDNAPYHQPED PLERLLGYIALRREMMDGEIADFTCFVGTMAQEAWATSPPVAAAAWDSMAEHAEKLAVDIDAAKAARGIAGDWSARSLAL HIGTVTQGAFILAKASGDASIAQDSLDHLRRYIEALFEAPAPAAKS
Specific function: Potential Regulator Protein For The Acrab Genes. [C]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22150; Mature: 22019
Theoretical pI: Translated: 5.78; Mature: 5.78
Prosite motif: PS01081 HTH_TETR_1 ; PS50977 HTH_TETR_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MARTANPHTRDNLMEAAFKLVREKGLTATTVDEICAAAGVSKGAFFHHFKSKEELAVAAA CCCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCHHHHHHCCHHHHHHHHH HHWSAVTGGFFDNAPYHQPEDPLERLLGYIALRREMMDGEIADFTCFVGTMAQEAWATSP HHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCC PVAAAAWDSMAEHAEKLAVDIDAAKAARGIAGDWSARSLALHIGTVTQGAFILAKASGDA CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCEEEEEECCCCH SIAQDSLDHLRRYIEALFEAPAPAAKS HHHHHHHHHHHHHHHHHHHCCCCCCCC >Mature Secondary Structure ARTANPHTRDNLMEAAFKLVREKGLTATTVDEICAAAGVSKGAFFHHFKSKEELAVAAA CCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCHHHHHHCCHHHHHHHHH HHWSAVTGGFFDNAPYHQPEDPLERLLGYIALRREMMDGEIADFTCFVGTMAQEAWATSP HHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHCCCC PVAAAAWDSMAEHAEKLAVDIDAAKAARGIAGDWSARSLALHIGTVTQGAFILAKASGDA CCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCCEEEEEECCCCH SIAQDSLDHLRRYIEALFEAPAPAAKS HHHHHHHHHHHHHHHHHHHCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: DNA [C]
Specific reaction: Protein + DNA = Protein-DNA [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA